Data_for_DRYAD

Compressed file containing genomic information, pedigree and phenotypic data used in the analysi

Breeding program history.

<p>History of the <i>E. nitens</i> breeding program established in New Zealand. The number of selected parents are given in the arrows between the different generations.</p

Variance components, heritability, their standard errors and Akaike Information Criterion (AIC) estimated on the basis of pedigree information, sib-ship reconstruction using only additive relationship matrix (Sib-ship A) and sib-ship reconstruction using additive and dominant relationship matrix (Sib-ship AD).

<p>Variance components, heritability, their standard errors and Akaike Information Criterion (AIC) estimated on the basis of pedigree information, sib-ship reconstruction using only additive relationship matrix (Sib-ship A) and sib-ship reconstruction using additive and dominant relationship matrix (Sib-ship AD).</p

Inbreeding depression effect.

<p>Comparison of performance between outbred and inbred individuals after sib-ship reconstruction and Welch t-test p-values; x-axis represents presence (1) or absence (0) of selfing.</p

Accuracy of breeding values estimated in single trait model, multi-trait model based on documented pedigree and multi-trait model based on information from sib-ship reconstruction.

<p>Accuracy of breeding values estimated in single trait model, multi-trait model based on documented pedigree and multi-trait model based on information from sib-ship reconstruction.</p

Relatedness agreement.

<p>Agreement in relatedness inferred from the pedigree and from sib-ship analysis and number of cases detected are given in the lower triangular relationship matrix (including diagonal) for each scenario.</p

Correspondence of estimated genetic gain and breeding values.

<p>Correspondence of genetic gain and breeding values estimated on the basis of information from pedigree (dashed line) or from sib-ship reconstruction (solid line); a) Wood density [kg/m3], b) Growth strain 1.4-3 m log [mm], c) Growth strain 3-6 m log [mm], d) Stiffness 1.4-3 m log [km/s], e) Stiffness 3-6 m log [km/s], f) Diameter at breast height [mm], g) Tangential air-dry shrinkage average 3-6 m log [%].</p

HIV incidence estimates.

<p>CI = confidence interval, FPR = false-positive ratio.</p