Percolative nature of the dc paraconductivity in the cuprate superconductors

We present an investigation of the planar direct-current (dc) paraconductivity of the model cuprate material HgBa$_2$CuO$_{4+\delta}$ in the underdoped part of the phase diagram. The simple quadratic temperature-dependence of the Fermi-liquid normal-state resistivity enables us to extract the paraconductivity above the macroscopic $T_c$ with great accuracy. The paraconductivity exhibits unusual exponential temperature dependence, with a characteristic temperature scale that is distinct from $T_c$. In the entire temperature range where it is discernable, the paraconductivity is quantitatively explained by a simple superconducting percolation model, which implies that underlying gap disorder dominates the emergence of superconductivity

Electronic transport mechanisms in a thin crystal of the Kitaev candidate α\alpha-RuCl3_3 probed through guarded high impedance measurements

$\alpha$-RuCl$_3$ is considered to be the top candidate material for the experimental realization of the celebrated Kitaev model. It is however known that additional interactions beyond the Kitaev model trigger in $\alpha$-RuCl$_3$, a long-range zigzag antiferromagnetic ground state. In this work, we investigate a nanoflake of $\alpha$-RuCl$_3$ through guarded high impedance measurements aimed at reaching through electronic transport, the regime where the system turns into a zigzag antiferromagnet. We investigated a variety of temperatures (\SI{1.45}{\kelvin} - \SI{175}{\kelvin}) and out-of-plane magnetic fields ranging up to \SI{11}{\tesla}. We found a clear signature of a structural phase transition at $\approx 160$\,K as reported for thin crystals of $\alpha$-RuCl$_3$, as well as a thermally activated behavior at temperatures above $\approx 30$\,K with a characteristic activation energy significantly smaller than the energy gap that we observe for $\alpha$-RuCl$_3$ bulk crystals through our Angle Resolved Photoemission Spectroscopy (ARPES) experiments. Additionally we found that below $\approx 30$\,K, transport is ruled by Efros-Shklovskii (ES) VRH. These observations point to the presence of Coulomb impurities in our thin crystals. Most importantly, our data shows that below the magnetic ordering transition known for bulk $\alpha$-RuCl$_3$ ($\approx 7$\,K), there is a clear deviation from VRH or thermal activation transport mechanisms. Our work demonstrates the possibility of reaching through specialized high impedance measurements, the thrilling ground states predicted for $\alpha$-RuCl$_3$ at low temperatures in the frame of the Kitaev model, and informs about the transport mechanisms in this material in a wide temperature range as well as on important characteristic quantities such as the localization length of the impurities in a thin $\alpha$-RuCl$_3$ crystal.Comment: 8 pages, 6 figures, Supplementary Material

Implications of tolerance to iron toxicity on root system architecture changes in rice (Oryza sativa L.)

IntroductionToxicity due to excess soil iron (Fe) is a significant concern for rice cultivation in lowland areas with acidic soils. Toxic levels of Fe adversely affect plant growth by disrupting the absorption of essential macronutrients, and by causing cellular damage. To understand the responses to excess Fe, particularly on seedling root system, this study evaluated rice genotypes under varying Fe levels.MethodsSixteen diverse rice genotypes were hydroponically screened under induced Fe levels, ranging from normal to excess. Morphological and root system characteristics were observed. The onset of leaf bronzing was monitored to identify the toxic response to the excess Fe. Additionally, agronomic and root characteristics were measured to classify genotypes into tolerant and sensitive categories by computing a response stability index.ResultsOur results revealed that 460 ppm of Fe in the nutrient solution served as a critical threshold for screening genotypes during the seedling stage. Fe toxicity significantly affected root system traits, emphasizing the consequential impact on aerial biomass and nutrient deprivation. To classify genotypes into tolerant and sensitive categories, leaf bronzing score was used as a major indicator of Fe stress. However, the response stability index provided a robust basis for classification for the growth performance. Apart from the established tolerant varieties, we could identify a previously unrecognized tolerant variety, ILS 12–5 in this study. Some of the popular mega varieties, including BPT 5204 and Pusa 44, were found to be highly sensitive.DiscussionOur findings suggest that root system damage, particularly in root length, surface area, and root volume, is the key factor contributing to the sensitivity responses under Fe toxicity. Tolerant genotypes were found to retain more healthy roots than the sensitive ones. Fe exclusion, by reducing Fe2+ uptake, may be a major mechanism for tolerance among these genotypes. Further field evaluations are necessary to confirm the behavior of identified tolerant and sensitive lines under natural conditions. Insights from the study provide potential scope for enhancement of tolerance through breeding programs as well as throw light on the role root system in conferring tolerance

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

Funder: NCI U24CA211006Abstract: The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) curated consensus somatic mutation calls using whole exome sequencing (WES) and whole genome sequencing (WGS), respectively. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which aggregated whole genome sequencing data from 2,658 cancers across 38 tumour types, we compare WES and WGS side-by-side from 746 TCGA samples, finding that ~80% of mutations overlap in covered exonic regions. We estimate that low variant allele fraction (VAF < 15%) and clonal heterogeneity contribute up to 68% of private WGS mutations and 71% of private WES mutations. We observe that ~30% of private WGS mutations trace to mutations identified by a single variant caller in WES consensus efforts. WGS captures both ~50% more variation in exonic regions and un-observed mutations in loci with variable GC-content. Together, our analysis highlights technological divergences between two reproducible somatic variant detection efforts

Global, regional, and national burden of disorders affecting the nervous system, 1990–2021: a systematic analysis for the Global Burden of Disease Study 2021

BackgroundDisorders affecting the nervous system are diverse and include neurodevelopmental disorders, late-life neurodegeneration, and newly emergent conditions, such as cognitive impairment following COVID-19. Previous publications from the Global Burden of Disease, Injuries, and Risk Factor Study estimated the burden of 15 neurological conditions in 2015 and 2016, but these analyses did not include neurodevelopmental disorders, as defined by the International Classification of Diseases (ICD)-11, or a subset of cases of congenital, neonatal, and infectious conditions that cause neurological damage. Here, we estimate nervous system health loss caused by 37 unique conditions and their associated risk factors globally, regionally, and nationally from 1990 to 2021.MethodsWe estimated mortality, prevalence, years lived with disability (YLDs), years of life lost (YLLs), and disability-adjusted life-years (DALYs), with corresponding 95% uncertainty intervals (UIs), by age and sex in 204 countries and territories, from 1990 to 2021. We included morbidity and deaths due to neurological conditions, for which health loss is directly due to damage to the CNS or peripheral nervous system. We also isolated neurological health loss from conditions for which nervous system morbidity is a consequence, but not the primary feature, including a subset of congenital conditions (ie, chromosomal anomalies and congenital birth defects), neonatal conditions (ie, jaundice, preterm birth, and sepsis), infectious diseases (ie, COVID-19, cystic echinococcosis, malaria, syphilis, and Zika virus disease), and diabetic neuropathy. By conducting a sequela-level analysis of the health outcomes for these conditions, only cases where nervous system damage occurred were included, and YLDs were recalculated to isolate the non-fatal burden directly attributable to nervous system health loss. A comorbidity correction was used to calculate total prevalence of all conditions that affect the nervous system combined.FindingsGlobally, the 37 conditions affecting the nervous system were collectively ranked as the leading group cause of DALYs in 2021 (443 million, 95% UI 378–521), affecting 3·40 billion (3·20–3·62) individuals (43·1%, 40·5–45·9 of the global population); global DALY counts attributed to these conditions increased by 18·2% (8·7–26·7) between 1990 and 2021. Age-standardised rates of deaths per 100 000 people attributed to these conditions decreased from 1990 to 2021 by 33·6% (27·6–38·8), and age-standardised rates of DALYs attributed to these conditions decreased by 27·0% (21·5–32·4). Age-standardised prevalence was almost stable, with a change of 1·5% (0·7–2·4). The ten conditions with the highest age-standardised DALYs in 2021 were stroke, neonatal encephalopathy, migraine, Alzheimer's disease and other dementias, diabetic neuropathy, meningitis, epilepsy, neurological complications due to preterm birth, autism spectrum disorder, and nervous system cancer.InterpretationAs the leading cause of overall disease burden in the world, with increasing global DALY counts, effective prevention, treatment, and rehabilitation strategies for disorders affecting the nervous system are needed

Annealing Study of the Cuprate Superconductor HgBa2CuO4+delta

Faculty adviser: Martin GrevenGrowths of the cuprate superconductor HgBa2CuO4+δ were carried out. In an attempt to reach extreme doping levels (i.e., Tc below 45 K), an entire boule was annealed at 680°C and 480 mTorr for a period of 1 month. The end result was unsuccessful, with a final Tc of about 83 K.This research was supported by the Undergraduate Research Opportunities Program (UROP)