169 research outputs found

    An Overall Evaluation Of The Resistance (r) And Pathogenesis-related (pr) Super Families In Soybean, As Compared With Medicago And Arabidopsis

    Get PDF
    Plants have the ability to recognize and respond to a multitude of pathogens, resulting in a massive reprogramming of the plant to activate defense responses including Resistance (R) and Pathogenesis-Related (PR) genes. Abiotic stresses can also activate PR genes and enhance pathogen resistance, representing valuable genes for breeding purposes. The present work offers an overview of soybean Rand PR genes present in the GENOSOJA (Brazilian Soybean Genome Consortium) platform, regarding their structure, abundance, evolution and role in the plant-pathogen metabolic pathway, as compared with Medicago and Arabidopsis. Searches revealed 3,065 R candidates (756 in Soybean, 1,142 in Medicago and 1,167 in Arabidopsis), and PR candidates matching to 1,261 sequences (310, 585 and 366 for the three species, respectively). The identified transcripts were also evaluated regarding their expression pattern in 65 libraries, showing prevalence in seeds and developing tissues. Upon consulting the Super SAGE libraries, 1,072 Rand 481 PR tags were identified in association with the different libraries. Multiple alignments were generated forXa21andPR-2genes, allowing inferences about their evolution. The results revealed interesting insights regarding the variability and complexity of defense genes in soybean, as compared with Medicago and Arabidopsis. © 2012, Sociedade Brasileira de Genética.35SUPPL.1260271Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., Walter, P., (2002) Molecular Biology of the Cell, p. 1616. , 4th edition. Garland Publishing Company, New York & LondonAltschul, S.F., Gish, W., Miller, W., Myers, E., Basic local alignment search tool (1990) J Mol Biol, 215, pp. 403-410Ashfield, T., Bocian, A., Held, D., Henk, A.D., Marek, L.F., Danesh, D., Penuela, S., Young, N.D., Genetic and physical localization of the soybean Rpg1-b disease resistance gene reveals a complex locus containing several tightly linked families of NBS-LRR genes (2003) Mol Plant Microbe Interact, 16, pp. 817-826Atici, O., Nalbantoglu, B., Antifreeze proteins in higher plants (2003) Phytochemistry, 64, pp. 1187-1196Barbosa-da-Silva, A., Wanderley-Nogueira, A.C., Silva, R.R.M., Belarmino, L.C., Soares-Cavalcanti, N.M., Benko-Iseppon, A.M., In silico survey of resistance (R) genes in Eucalyptus transcriptome (2005) Genet Mol Biol, 28, pp. 562-574Benko-Iseppon, A.M., Galdino, S.L., Calsa, T., Kido, E.A., Tossi, A., Belarmino, L.C., Crovella, S., Overview of plant antimicrobial peptides (2010) Curr Prot Pept Sci, 11, pp. 181-188Bent, A.F., Plant disease resistance genes: Function meets structure (1996) Plant Cell, 8, pp. 1751-1771Bolton, M., Primary metabolism and plant defense-Fuel for the fire (2009) Mol Plant Microbe Interact, 22, pp. 487-497Bonas, U., Anckerveken, G.V., Gene-for-gene interactions: Bacterial avirulence proteins specify plant disease resistance (1999) Curr Opin Plant Biol, 2, pp. 94-98Bonasera, J.M., Kim, J.F., Beer, S.V., PR genes of apple: Identification and expression in response to elicitors and inoculation with Erwinia amylovora (2006) BMC Plant Biol, 6, pp. 23-34Cannon, S.B., May, G.D., Jackson, S.A., Three sequenced legume genomes and many crop species: Rich opportunities for translational genomics (2009) Plant Physiol, 151, pp. 970-977Chester, K.S., The problem of acquired physiological immunity in plants (1933) Quart Rev Phytopathol, 42, pp. 185-209Dafny-Yelin, M., Tzfira, T., Delivery of multiple trans-genes to plant cells (2007) Plant Physiol, 145, pp. 1118-1128Dinesh-Kumar, S.P., Whitham, S., Choi, D., Hehl, R., Corr, C., Baker, B., Transposon tagging of tobacco mosaic virus resistance gene N:I its possible role in the TMV-N-mediated signal transduction pathway (1995) Proc Natl Acad Sci USA, 92, pp. 4175-4180Dixon, M.S., Jones, D.A., Keddie, J.S., Thomas, C.T., Harrison, K., Jones, J.D.G., The tomato Cf2 disease resistance locus comprises two functional genes encoding leucine rich repeats proteins (1996) Cell, 84, pp. 451-459Durrant, W.E., Dong, X., Systemic acquired resistance (2004) Annu Rev Plant Pathol, 42, pp. 185-209Eisen, M.B., Spellman, P.T., Brown, P.O., Botstein, B., Cluster analysis and display of genome-wide expression patterns (1998) Genetics, 25, pp. 14863-14868Ellis, J., Jones, D., Structure and function of proteins controlling strain-specific pathogen resistance in plants (2000) Curr Opin Plant Biol, 1, pp. 288-293Ellis, J., Lawrence, G.J., Finnegan, E.J., Anderson, P.A., Contrasting complexity of two rust resistance loci in flax (1995) Proc Natl Acad Sci USA, 92, pp. 4185-4188Ellis, J., Dodds, P., Pryor, T., Structure, function and evolution of plant disease resistance genes (2000) Curr Opin Plant Biol, 3, pp. 278-284Gaffney, T., Friedrich, L., Vernooij, B., Negrotto, D., Nye, G., Ukness, S., Ward, E., Kessman Hand Ryals, J., Requirementofsalicylic acid for the induction of systemic acquired resistance (1993) Science, 261, pp. 754-756Glombitza, S., Dubuis, P.-H., Thulke, O., Welzl, G., Bovet, L., Götz, M., Affenzeller, M., Asnaghi, C., Crosstalk and differential response to abiotic and biotic stressors reflected at the transcriptional level of effector genes from secondary metabolism (2004) Plant Mol Biol, 54, pp. 817-835Griffith, M., Yaish, M.W.F., Antifreeze proteins in overwintering plants: A tale of two activities (2004) Trends Plant Sci, 9, pp. 399-405Hammond-Kosack, K.E., Jones, J.D.G., Plant disease resistance genes (1997) Annu Rev Plant Physiol, 48, pp. 575-607Hon, W.C., Griffith, M., Mlynarz, A., Kwok, Y.C., Yang, D.S.C., Antifreeze proteins in winter rye are similar to pathogenesis-related proteins (1995) Plant Physiol, 109, pp. 879-889Hulbert, S.H., Webb, C.A., Smith, S.M., Sun, Q., Resistance gene complexes: Evolution and utilization (2001) Annu Rev Phytopathol, 39, pp. 285-312Joahal, G.S., Briggs, S.P., Reductase activity encodes by the Hm1 resistance gene in maize (1992) Science, 198, pp. 985-987Kanazin, V., Marek, L.F., Shoemaker, R.C., Resistance gene analogs are conserved and clustered in soybean (1996) Proc Natl Acad Sci USA, 93, pp. 11746-11750Kido, E.A., Barbosa, P.K., Ferreira Neto, J.C.R., Pandolfi, V., Houllou-Kido, L.M., Crovella, S., Benko-Iseppon, A.M., Identification of plant protein kinases in response to abiotic and biotic stresses using Super SAGE (2011) Curr Prot Pept Sci, 12, pp. 643-656Kitajima, S., Sato, F., Plant pathogenesis-related proteins: Molecular mechanisms of gene expression and protein function (1999) J Biochem, 125, pp. 1-8Lavin, M., Herendeen, P.S., Wojciechowski, M.F., Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary (2005) Syst Biol, 54, pp. 575-594Lawrence, G.J., Finnegan, E.J., Ayliffe, M.A., Ellis, J.G., The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene (1995) N. Plant Cell, 7, pp. 1195-1206Leubner-Metzger, G., β-1,3-glucanase gene expression in low-hydrated seeds as a mechanism for dormancy release during tobacco after-ripening (2005) Plant J, 41, pp. 133-145Li, L., He, H., Zhang, J., Wang, X., Bai, S., Stolc, V., Tongprasit, W., Deng, X.W., Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays (2008) Genome Biol, 9, pp. R57Libault, M., Farmer, A., Joshi, T., Takahashi, K., Langley, R.J., Franklin, L.D., He, J., Stacey, G., An integrated transcriptome atlas of the crop model Glycine max and its use in comparative analyses in plants (2010) Plant J, 63, pp. 86-99Liu, B., Zhang, S., Zhu, X., Yang, Q., Wu, S., Mei, M., Mauleon, R., Leung, H., Candidate defense genes as predictors of quantitative blast resistance in rice (2004) Mol Plant Microbe Int, 17, pp. 1146-1152Maisonneuve, B., Bellec, Y., Anderson, P., Michelmore, R.W., Rapid mapping of two genes for resistance to downy mildew from Lactuca serriola to existing clusters of resistance genes (1994) Theor Appl Genet, 89, pp. 96-104Matsumura, H., Kruger, D.H., Kahl, G., Terauchi, R., SuperSAGE: A modern platform for genome-wide quantitative transcript profiling (2008) Curr Pharm Biotechnol, 9, pp. 368-374Melotto, M., Coelho, M.F., Pedrosa-Harand, A., Kelly, J.D., Camargo, L.E., The anthracnose resistance locus Co-4 of common bean is located on chromosome 3 and contains putative disease resistance-related genes (2004) Theor Appl Genet, 109, pp. 690-699Metzler, M.C., Cutt, J.R., Klessig, D.F., Isolation and characterization of a gene encoding a PR-1 like protein from Arabidopsis thaliana (1991) Plant Physiol, 96, pp. 346-348Michelmore, R.W., Meyers, B.C., Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process (1998) Genome Res, 8, pp. 1113-1130Mindrinos, M., Katagiri, F., Yu, G.L., Ausubel, F.M., The Arabidopsis thaliana disease resistance gene encodes a protein containing a nucleotide-binding site and leucine rich repeats (1994) Cell, 78, pp. 1089-1099Mudge, J., Cannon, S.B., Kalo, P., Oldroyd, G.E., Roe, B.A., Town, C.D., Young, N.D., Highly syntenic regions in the genomes of soybean, Medicago truncatula and Arabidopsis thaliana (2005) BMC Plant Biol, 5, pp. e15Nanda, A.K., Andrio, E., Marino, D., Pauly, N., Dunand, C., Reactive Oxygen Species during plant-microorganism early interactions (2010) J Integr Plant Biol, 52, pp. 195-204Nurnberg, T., Brunner, F., Innate immunity in plants and animals: Emerging parallels between the recognition of general elicitors and pathogen-associated molecular patterns (2002) Curr Opin Plant Biol, 5, pp. 318-324Page, R.D., (1996) Comp Appl Biosci, 12, pp. 357-358Rayapati, P.J., Lee, M., Gregory, J.W., Wise, R.P., A linkage map of diploid Avena based on RFLP loci and a locus conferring resistance to nine isolates of Puccinia coronata var. 'avenae' (1994) Theor Appl Genet, 89, pp. 831-837Salmeron, J.M., Oldroyd, G.E.D., Romens, C.M.T., Scofield, S.R., Kim, H.S., Lavelle, D.T., Dahlbeck, D., Staskawicz, B.J., Tomato Prf is a member of the leucine rich repeats class of plant disease resistance genes and lies embedded within the Pto kinase gene cluster (1996) Cell, 86, pp. 123-133Shoemaker, R.C., Schlueter, J., Doyle, J.J., Paleopolyploidy and gene duplication in soybean and other legumes (2006) Curr Opin Plant Biol, 9, pp. 104-109Song, W.Y., Pi, L.Y., Wang, G.L., Gardner, J., Holsten, T., Ronald, P.C., Evolution of the rice Xa21 disease resistance genes family (1997) Plant Cell, 9, pp. 1279-1287Song, W.Y., Wang, G.L., Kim, H.S., Pi, L.Y., Gardner, J., Wang, B., Holsten, T., Fauquet, C., A receptor kinase-like protein encoded by the rice disease resistance gene Xa21 (1995) Science, 270, pp. 1804-1806Sparla, F., Rotino, L., Valgimigli, M.C., Pupillo, P., Trost, P., Systemic resistance induced by benzothisdizole in pear inoculated with the agent of fire blight (2004) Sci Hortic, 101, pp. 269-279Tamura, K., Dudley, J., Nei, M., Kumar, S., MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software ver. 4.0 (2007) Mol Biol Evol, 24, pp. 1596-1599Tang, X., Xie, M., Kim, Y.J., Zhou, J., Klessing, D.F., Martin, G.B., Overexpression of Pto activates defense responses and confers broad resistance (1999) Plant Cell, 11, pp. 15-29Thiel, T., Graner, A., Waugh, R., Grosse, I., Close, T.J., Stein, N., Evidence and evolutionary of ancient whole-genome duplication in barley predating the divergence from rice (2009) BMC Evol Biol, 9, pp. 209-227Tornero, P., Gadea, J., Conejero, V., Vera, P., Two PR-1 genes from tomato are differentially regulated and reveal a novel mode of expression for a pathogenesis-related gene during the hypersensitive response and development (1997) Plant Microbe Interact, 10, pp. 624-634Van-Loon, L.C., Geraats, B.P.J., Linthorst, H.J.M., Ethylene as a modulator of disease resistance in plants (2006) Trends Plant Sci, 11, pp. 184-191Van-Loon, L.C., Pierpoint, W.S., Boller, T., Conejero, V., Recommendations for naming plant pathogenesis-related proteins (1999) Plant Mol Biol Rep, 12, pp. 245-264Velazhahan, R., Muthukrishnan, S., Transgenic tobacco plants constitutively overexpressing a rice thaumatin-like protein (PR-5) show enhanced resistance to Alternaria alternata (2003) Plant Biol, 47, pp. 347-354Vergne, E., Grand, X., Ballini, R., Chalvon, V., Saindrenan, P., Tharreau, D., Nottéghem, J.-L., Morel, J.-B., Preformed expression of defense is a hallmark of partial resistance to rice blast fungal pathogen Magnaporthe oryzae (2010) BMC Plant Biol, 10, pp. e206Wanderley-Nogueira, A.C., Mota, N., Lima-Morais, D., Silva, L.C.B., Silva, A.B., Benko-Iseppon, A.M., Abundance and diversity of resistance (R) genes in the sugarcane trans-criptome (2007) Genet Mol Res, 6, pp. 866-889Wang, G.L., Holsten, T.E., Song, W.Y., Wang, H.P., Ronald, P.C., Construction of a rice bacterial artificial chromosome library and identification of clones linked to the Xa21 disease resistance locus (1995) Plant J, 7, pp. 525-533Wendell, J., Genome evolution in polyploids (2000) Plant Mol Biol, 42, pp. 225-249Weng, J.K., Banks, J.A., Chapple, C., Parallels in lignin biosynthesis: A study in Selaginella moellendorffii reveals convergence across 400 million years of evolution (2008) Comm Int Biol, 1, pp. 20-22Wilkstrom, N., Savolainen, V., Chase, M.W., Evolution of the angiosperms: Calibrating the family tree (2001) Proc Soc Biol Sci, 268, pp. 2211-2220Zeier, J., Pink, B., Mueller, M.J., Berger, S., Light conditions influence specific defense responses in incompatible plant-pathogen interactions: Uncoupling systemic resistance from salicylic acid and PR-1 accumulation (2004) Planta, 219, pp. 673-68

    Use of Melaleuca alternifolia Cheel (Myrtaceae) oil in dentistry: perspectives on its use as alternative antimicrobial to infectious diseases of oral origin

    Get PDF
    The interest in alternative medicines, especially those from natural extracts, has increased in recent decades. Melaleuca alternifolia is a shrub belonging to the genus Melaleuca, popularly known as tea tree, the main product of which is its essential oil (TTO - tea tree oil), of great medicinal importance for its proven bactericidal and antifungal activity against several human pathogens. By virtue of its therapeutic activity in various medical specialties, TTO is now used in dentistry. This literature review was conducted in order to discuss the tests already carried out with TTO against microorganisms related to dental caries, periodontal disease and pulpal problems. Melaleuca oil has shown good in vitro antibacterial activity against oral microorganisms; however, research involving the study of its mechanism of action on the microbial cells or in vivo studies are still scarce and need to be done since this product may be useful in dentistry, either in the chemical maintenance of hygiene or in the prevention of oral diseases.O interesse por medicamentos alternativos, principalmente daqueles provenientes de extratos naturais, tem aumentado nas últimas décadas. A Melaleuca alternifolia é um arbusto pertencente ao gênero Melaleuca, popularmente conhecida como árvore de chá, cujo principal produto é o óleo essencial (TTO - tea tree oil), de grande importância medicinal por possuir comprovada ação bactericida e antifúngica contra diversos patógenos humanos. Em virtude da atividade terapêutica em diversas especialidades médicas, o TTO passou a ser empregado na área odontológica. Esta revisão de literatura foi realizada com o objetivo de discutir os ensaios já realizados com o TTO contra microrganismos relacionados à doença cárie, doença periodontal e problemas pulpares. O óleo de Melaleuca tem demonstrado boa ação antibacteriana in vitro contra microrganismos bucais, porém, pesquisas envolvendo o estudo do mecanismo de ação sobre as células microbianas ou estudos in vivo ainda são escassos e precisam ser realizados, já que esse produto pode ser útil na odontologia, seja na manutenção química da higiene ou prevenção de doenças bucais.49249
    corecore