Seasonal reproduction in a fluctuating energy environment: Insolation-driven synchronized broadcast spawning in corals

*Background/Question/Methods:* Colonies of spawning corals reproduce in mass-spawning events, in which polyps within each colony release sperm and eggs for fertilization in the water column, with fertilization occurring only between gametes from different colonies. Participating colonies synchronize their gamete release to a window of a few hours once a year (for the species Acropora digitifera we study experimentally). This remarkable synchrony is essential for successful coral reproduction and thus, maintenance of the coral reef ecosystem that is currently under threat from local and global environmental effects such as pollution, global warming and ocean acidification. The mechanisms determining this tight synchrony in reproduction are not well understood, although several influences have been hypothesized and studied including lunar phase, solar insolation, and influences of temperature and tides. Moreover, most corals are in a symbiotic relationship with photosynthetic algae (Symbiodinium spp.) that live within the host tissue. Experiments supported by detailed bioenergetic modeling of the coral-algae symbiosis have shown that corals receive >90% of their energy needs from these symbionts. We develop a bioenergetic integrate-and-fire model in order to investigate whether annual insolation rhythms can entrain the gametogenetic cycles that produce mature gametes to the appropriate spawning season, since photosynthate is their primary source of energy. We solve the integrate-and-fire bioenergetic model numerically using the Fokker-Planck equation and use analytical tools such as rotation number to study entrainment.

*Results/Conclusions:* In the presence of short-term fluctuations in the energy input, our model shows that a feedback regulatory mechanism is required to achieve coherence of spawning times to within one lunar cycle, in order for subsequent cues such as lunar and diurnal light cycles to unambiguously determine the “correct” night of spawning. Entrainment to the annual insolation cycle is by itself not sufficient to produce the observed coherence in spawning. The feedback mechanism can also provide robustness against population heterogeneity due to genetic and environmental effects. We also discuss how such bioenergetic, stochastic, integrate-and-fire models are also more generally applicable: for example to aquatic insect emergence, synchrony in cell division and masting in trees

Semi-Classical Description of Antiproton Capture on Atomic Helium

A semi-classical, many-body atomic model incorporating a momentum-dependent Heisenberg core to stabilize atomic electrons is used to study antiproton capture on Helium. Details of the antiproton collisions leading to eventual capture are presented, including the energy and angular momentum states of incident antiprotons which result in capture via single or double electron ionization, i.e. into [He$^{++}\,\bar p$ or He$^{+}\,\bar p$], and the distribution of energy and angular momentum states following the Auger cascade. These final states are discussed in light of recently reported, anomalously long-lived antiproton states observed in liquid He.Comment: 15 pages, 9 figures may be obtained from authors, Revte

Variational Approach to Hard Sphere Segregation Under Gravity

It is demonstrated that the minimization of the free energy functional for hard spheres and hard disks yields the result that excited granular materials under gravity segregate not only in the widely known "Brazil nut" fashion, i.e. with the larger particles rising to the top, but also in reverse "Brazil nut" fashion. Specifically, the local density approximation is used to investigate the crossover between the two types of segregation occurring in the liquid state, and the results are found to agree qualitatively with previously published results of simulation and of a simple model based on condensation.Comment: 10 pages, 3 figure

Thermodynamic Casimir effects involving interacting field theories with zero modes

Systems with an O(n) symmetrical Hamiltonian are considered in a $d$-dimensional slab geometry of macroscopic lateral extension and finite thickness $L$ that undergo a continuous bulk phase transition in the limit $L\to\infty$. The effective forces induced by thermal fluctuations at and above the bulk critical temperature $T_{c,\infty}$ (thermodynamic Casimir effect) are investigated below the upper critical dimension $d^*=4$ by means of field-theoretic renormalization group methods for the case of periodic and special-special boundary conditions, where the latter correspond to the critical enhancement of the surface interactions on both boundary planes. As shown previously [\textit{Europhys. Lett.} \textbf{75}, 241 (2006)], the zero modes that are present in Landau theory at $T_{c,\infty}$ make conventional RG-improved perturbation theory in $4-\epsilon$ dimensions ill-defined. The revised expansion introduced there is utilized to compute the scaling functions of the excess free energy and the Casimir force for temperatures T\geqT_{c,\infty} as functions of $\mathsf{L}\equiv L/\xi_\infty$, where $\xi_\infty$ is the bulk correlation length. Scaling functions of the $L$-dependent residual free energy per area are obtained whose $\mathsf{L}\to0$ limits are in conformity with previous results for the Casimir amplitudes $\Delta_C$ to $O(\epsilon^{3/2})$ and display a more reasonable small-$\mathsf{L}$ behavior inasmuch as they approach the critical value $\Delta_C$ monotonically as $\mathsf{L}\to 0$.Comment: 23 pages, 10 figure

Fluctuations of elastic interfaces in fluids: Theory and simulation

We study the dynamics of elastic interfaces-membranes-immersed in thermally excited fluids. The work contains three components: the development of a numerical method, a purely theoretical approach, and numerical simulation. In developing a numerical method, we first discuss the dynamical coupling between the interface and the surrounding fluids. An argument is then presented that generalizes the single-relaxation time lattice-Boltzmann method for the simulation of hydrodynamic interfaces to include the elastic properties of the boundary. The implementation of the new method is outlined and it is tested by simulating the static behavior of spherical bubbles and the dynamics of bending waves. By means of the fluctuation-dissipation theorem we recover analytically the equilibrium frequency power spectrum of thermally fluctuating membranes and the correlation function of the excitations. Also, the non-equilibrium scaling properties of the membrane roughening are deduced, leading us to formulate a scaling law describing the interface growth, W^2(L,T)=L^3 g[t/L^(5/2)], where W, L and T are the width of the interface, the linear size of the system and the temperature respectively, and g is a scaling function. Finally, the phenomenology of thermally fluctuating membranes is simulated and the frequency power spectrum is recovered, confirming the decay of the correlation function of the fluctuations. As a further numerical study of fluctuating elastic interfaces, the non-equilibrium regime is reproduced by initializing the system as an interface immersed in thermally pre-excited fluids.Comment: 15 pages, 11 figure

Reliability and Validity of S3 Pressure Sensation as an Alternative to Deep Anal Pressure in Neurologic Classification of Persons With Spinal Cord Injury.

OBJECTIVE: To determine whether pressure sensation at the S3 dermatome (a new test) could be used in place of deep anal pressure (DAP) to determine completeness of injury as part of the International Standards for Neurological Classification of Spinal Cord Injury. DESIGN: Prospective, multicenter observational study. SETTING: U.S. Spinal Cord Injury Model Systems. PARTICIPANTS: Persons (N=125) with acute traumatic spinal cord injury (SCI), neurologic levels T12 and above, were serially examined at 1 month (baseline), 3, 6, and 12 months postinjury. There were 80 subjects with tetraplegia and 45 with paraplegia. INTERVENTIONS: S3 pressure sensation at all time points, with a retest at the 1-month time point. MAIN OUTCOME MEASURES: Test-retest reliability and agreement (κ), sensitivity, specificity, positive and negative predictive values. RESULTS: Test-retest reliability of S3 pressure at 1 month was almost perfect (κ=.98). Agreement of S3 pressure with DAP was substantial both at 1 month (κ=.73) and for all time points combined (κ=.76). The positive predictive value of S3 pressure for DAP was 89.3% at baseline and 90.3% for all time points. No pattern in outcomes was seen in those cases where S3 pressure and DAP differed at 1 month. CONCLUSIONS: S3 pressure sensation is reliable and has substantial agreement with DAP in persons with SCI at least 1 month postinjury. We suggest S3 pressure as an alternative test of sensory sacral sparing for supraconus SCI, at least in cases where DAP cannot be tested. Further research is needed to determine whether S3 pressure could replace DAP for classification of SCI

Resonances in a two-dimensional electron waveguide with a single delta-function scatterer

We study the conductance properties of a straight two-dimensional electron waveguide with an s-like scatterer modeled by a single delta-function potential with a finite number of modes. Even such a simple system exhibits interesting resonance phenomena. These resonances are explained in terms of quasi-bound states both by using a direct solution of the Schroedinger equation and by studying the Green's function of the system. Using the Green's function we calculate the survival probability as well as the power absorption and show the influence of the quasi-bound states on these two quantities.Comment: 5 pages, 6 figures, to be published in Physical Review

Optical imaging of the chorioretinal vasculature in the living human eye

Detailed visualization of microvascular changes in the human retina is clinically limited by the capabilities of angiography imaging, a 2D fundus photograph that requires an intravenous injection of fluorescent dye. Whereas current angiography methods enable visualization of some retinal capillary detail, they do not adequately reveal the choriocapillaris or other microvascular features beneath the retina. We have developed a noninvasive microvascular imaging technique called phase-variance optical coherence tomography (pvOCT), which identifies vasculature three dimensionally through analysis of data acquired with OCT systems. The pvOCT imaging method is not only capable of generating capillary perfusion maps for the retina, but it can also use the 3D capabilities to segment the data in depth to isolate vasculature in different layers of the retina and choroid. This paper demonstrates some of the capabilities of pvOCT imaging of the anterior layers of choroidal vasculature of a healthy normal eye as well as of eyes with geographic atrophy (GA) secondary to age-related macular degeneration. The pvOCT data presented permit digital segmentation to produce 2D depth-resolved images of the retinal vasculature, the choriocapillaris, and the vessels in Sattler’s and Haller’s layers. Comparisons are presented between en face projections of pvOCT data within the superficial choroid and clinical angiography images for regions of GA. Abnormalities and vascular dropout observed within the choriocapillaris for pvOCT are compared with regional GA progression. The capability of pvOCT imaging of the microvasculature of the choriocapillaris and the anterior choroidal vasculature has the potential to become a unique tool to evaluate therapies and understand the underlying mechanisms of age-related macular degeneration progression

Targeted control of pneumolysin production by a mobile genetic element in Streptococcus pneumoniae

Streptococcus pneumoniae is a major human pathogen that can cause severe invasive diseases such as pneumonia, septicaemia and meningitis. Young children are at a particularly high risk, with an estimated 3–4 million cases of severe disease and between 300 000 and 500 000 deaths attributable to pneumococcal disease each year. The haemolytic toxin pneumolysin (Ply) is a primary virulence factor for this bacterium, yet despite its key role in pathogenesis, immune evasion and transmission, the regulation of Ply production is not well defined. Using a genome-wide association approach, we identified a large number of potential affectors of Ply activity, including a gene acquired horizontally on the antibiotic resistance-conferring Integrative and Conjugative Element (ICE) ICESp23FST81. This gene encodes a novel modular protein, ZomB, which has an N-terminal UvrD-like helicase domain followed by two Cas4-like domains with potent ATP-dependent nuclease activity. We found the regulatory effect of ZomB to be specific for the ply operon, potentially mediated by its high affinity for the BOX repeats encoded therein. Using a murine model of pneumococcal colonization, we further demonstrate that a ZomB mutant strain colonizes both the upper respiratory tract and lungs at higher levels when compared to the wild-type strain. While the antibiotic resistance-conferring aspects of ICESp23FST81 are often credited with contributing to the success of the S. pneumoniae lineages that acquire it, its ability to control the expression of a major virulence factor implicated in bacterial transmission is also likely to have played an important role