Effetto dell’ivabradina nelle fasi iniziali e nella progressione dell’aterosclerosi

Effect of ivabradine in the initial steps and in the progression of the atherosclerosis Purpose: Ivabradine reduces heart rate (HR) by selectively inhibiting the If current in the sinus node. A sub-group of the BEAUTifUL study showed that ivabradine reduces the incidence of myocardial infarction in coronary artery disease (CAD) patients with HR ≥ 70bpm, suggesting a protective effect on the arterial wall. The SIGNifY study is currently testing this hypothesis in more than 19000 CAD patients. In dyslipidaemic mice, ivabradine improves vascular function and reduces aortic plaques area. It has been suggested that ivabradine may exert a protective activity by decreasing low/oscillatory shear stress, which is proinflammatory in the endothelium. This study aims to determine if HR reduction with ivabradine induces an atheroprotective gene expression profile in the endothelium of dyslipidaemic mice before plaque formation. Methods: 6 week-old ApoE deficient mice (n=6), fed a chow diet, were treated with ivabradine (30 mg/Kg/day, in drinking water) for 2 or 4 weeks. Two control groups (n=6) received no ivabradine. Ivabradine reduced HR by 17.4% and 22.9% in mice treated for 2 weeks and 4 weeks respectively. At the end of treatment, endothelium-enriched RNA was isolated from the aortic arch. Gene expression was analyzed by Agilent Whole Mouse Gene Expression Microarray (60k probes). Pathway analysis was performed using DAVID tools. Principal components analysis showed that most of the variability in gene expression can be attributed to ivabradine treatment and was independent of treatment duration. Differentially expressed genes were selected as having a ≥ 1.5-fold expression difference between treated and untreated groups with a p-value ≤ 0.01 at unpaired t-test. Results: Treatment induced changes in the expression of 930 transcripts. Shear stress-modulated pathways such as MAPK signalling and steroid biosynthesis process (both inhibited by treatment) were among the most significantly affected pathways (p-value = 0.0065 and 0.0009, respectively). We found up-regulation of anti-inflammatory genes and down-regulation of pro-apoptotic and pro-inflammatory genes, the majority of which were NF-kappa B and/or Ang II-regulated genes. Among them, the receptor for oxidized lipoprotein (Olr1) was strongly downregulated (3.2 fold). Conclusions: In dyslipidaemic mice, short term treatment with ivabradine induces an atheroprotective gene expression profile in the endothelium. Since many of the affected genes are shear stress regulated, our data suggest that shear stress frequency modulation could be part of the molecular mechanisms by which ivabradine protects the endothelium

A catalogue of nuclear stellar velocity dispersions of nearby galaxies from \u2009H\u3b1 STIS spectra to constrain supermassive black hole masses

We present new measurements for the nuclear stellar velocity dispersion \u3c3* within sub-arcsecond apertures for 28 nearby galaxies. Our data consist of Space Telescope Imaging Spectrograph (STIS) long-slit spectra obtained with the G750M grating centred on the H\u3b1 spectral range. We fit the spectra using a library of single stellar population models and Gaussian emission lines, while constraining in most cases the stellar-population content from an initial fit to G430L STIS spectra. We illustrate how these \u3c3* measurements can be useful for constraining the mass M\u2022 of supermassive black holes (SBHs) by concentrating on the cases of the lenticular galaxies NGC 4435 and NGC 4459. These are characterized by similar ground-based half-light radii stellar velocity dispersion \u3c3e values but remarkably different M\u2022 as obtained from modelling their central ionized-gas kinematics, where NGC 4435 appears to host a significantly undermassive SBH compared to what is expected from the M\u2022 - \u3c3e relation. For both galaxies, we build Jeans axisymmetric dynamical models to match the ground-based stellar kinematics obtained with Spectrographic Areal Unit for Research on Optical Nebulae integral-field spectrograph, including an SBH with M\u2022 value as predicted by the M\u2022 - \u3c3e relation and using high-resolution HST images taken with the Advanced Camera for Surveys to construct the stellar-mass model. By mimicking the HST observing conditions we use such reference models to make a prediction for the nuclear \u3c3* value. Whereas this was found to agree with our nuclear \u3c3* measurement for NGC 4459, for NGC 4435 the observed \u3c3* is remarkably smaller than the predicted one, which further suggests that this galaxy could host an undermassive SBH

INSPEcT: a computational tool to infer mRNA synthesis, processing and degradation dynamics from RNA- and 4sU-seq time course experiments.

Abstract Motivation: Cellular mRNA levels originate from the combined action of multiple regulatory processes, which can be recapitulated by the rates of pre-mRNA synthesis, pre-mRNA processing and mRNA degradation. Recent experimental and computational advances set the basis to study these intertwined levels of regulation. Nevertheless, software for the comprehensive quantification of RNA dynamics is still lacking. Results: INSPEcT is an R package for the integrative analysis of RNA- and 4sU-seq data to study the dynamics of transcriptional regulation. INSPEcT provides gene-level quantification of these rates, and a modeling framework to identify which of these regulatory processes are most likely to explain the observed mRNA and pre-mRNA concentrations. Software performance is tested on a synthetic dataset, instrumental to guide the choice of the modeling parameters and the experimental design. Availability and implementation: INSPEcT is submitted to Bioconductor and is currently available as Supplementary Additional File S1. Contact: [email protected] Supplementary Information: Supplementary data are available at Bioinformatics online

Selective transcriptional regulation by Myc: Experimental design and computational analysis of high-throughput sequencing data

AbstractThe gene expression programs regulated by the Myc transcription factor were evaluated by integrated genome-wide profiling of Myc binding sites, chromatin marks and RNA expression in several biological models. Our results indicate that Myc directly drives selective transcriptional regulation, which in certain physiological conditions may indirectly lead to RNA amplification. Here, we illustrate in detail the experimental design concerning the high-throughput sequencing data associated with our study (Sabò et al., Nature. (2014) 511:488–492) and the R scripts used for their computational analysis

Reawakening the Intrinsic Cardiac Regenerative Potential: Molecular Strategies to Boost Dedifferentiation and Proliferation of Endogenous Cardiomyocytes

Despite considerable efforts carried out to develop stem/progenitor cell-based technologies aiming at replacing and restoring the cardiac tissue following severe damages, thus far no strategies based on adult stem cell transplantation have been demonstrated to efficiently generate new cardiac muscle cells. Intriguingly, dedifferentiation, and proliferation of pre-existing cardiomyocytes and not stem cell differentiation represent the preponderant cellular mechanism by which lower vertebrates spontaneously regenerate the injured heart. Mammals can also regenerate their heart up to the early neonatal period, even in this case by activating the proliferation of endogenous cardiomyocytes. However, the mammalian cardiac regenerative potential is dramatically reduced soon after birth, when most cardiomyocytes exit from the cell cycle, undergo further maturation, and continue to grow in size. Although a slow rate of cardiomyocyte turnover has also been documented in adult mammals, both in mice and humans, this is not enough to sustain a robust regenerative process. Nevertheless, these remarkable findings opened the door to a branch of novel regenerative approaches aiming at reactivating the endogenous cardiac regenerative potential by triggering a partial dedifferentiation process and cell cycle re-entry in endogenous cardiomyocytes. Several adaptations from intrauterine to extrauterine life starting at birth and continuing in the immediate neonatal period concur to the loss of the mammalian cardiac regenerative ability. A wide range of systemic and microenvironmental factors or cell-intrinsic molecular players proved to regulate cardiomyocyte proliferation and their manipulation has been explored as a therapeutic strategy to boost cardiac function after injuries. We here review the scientific knowledge gained thus far in this novel and flourishing field of research, elucidating the key biological and molecular mechanisms whose modulation may represent a viable approach for regenerating the human damaged myocardium

Cardiotoxicity of Anticancer Drugs: Molecular Mechanisms and Strategies for Cardioprotection

Chemotherapy and targeted therapies have significantly improved the prognosis of oncology patients. However, these antineoplastic treatments may also induce adverse cardiovascular effects, which may lead to acute or delayed onset of cardiac dysfunction. These common cardiovascular complications, commonly referred to as cardiotoxicity, not only may require the modification, suspension, or withdrawal of life-saving antineoplastic therapies, with the risk of reducing their efficacy, but can also strongly impact the quality of life and overall survival, regardless of the oncological prognosis. The onset of cardiotoxicity may depend on the class, dose, route, and duration of administration of anticancer drugs, as well as on individual risk factors. Importantly, the cardiotoxic side effects may be reversible, if cardiac function is restored upon discontinuation of the therapy, or irreversible, characterized by injury and loss of cardiac muscle cells. Subclinical myocardial dysfunction induced by anticancer therapies may also subsequently evolve in symptomatic congestive heart failure. Hence, there is an urgent need for cardioprotective therapies to reduce the clinical and subclinical cardiotoxicity onset and progression and to limit the acute or chronic manifestation of cardiac damages. In this review, we summarize the knowledge regarding the cellular and molecular mechanisms contributing to the onset of cardiotoxicity associated with common classes of chemotherapy and targeted therapy drugs. Furthermore, we describe and discuss current and potential strategies to cope with the cardiotoxic side effects as well as cardioprotective preventive approaches that may be useful to flank anticancer therapies

Adrenal Ganglioneuroma with Multifocal Retroperitoneal Extension: A Challenging Diagnosis

A ganglioneuroma (GN) is the rarest and most benign of the neuroblastic tumors and originates from neural crest cells wherever sympathetic nervous tissue exists, such as in the retroperitoneum and adrenal gland. The diagnosis can be very challenging, given the rarity and asymptomatic presentation of this neoplasia, and can be achieved only by means of histological evaluation. Although benign, a few cases of metastatic GNs have been reported in the literature. The prognosis, however, seems to be excellent after surgical resection. We describe a rare case of multifocal retroperitoneal GN, diagnosed incidentally in a 46-year-old woman, with para-aortic and adrenal localizations. After intraoperative pathological diagnosis was made, complete excision of all the visible masses was performed. The postoperative period was uneventful and she was recurrence free 3 months after surgery. To our knowledge, this is the first case report of a multifocal retroperitoneal GN. Among the broad differential diagnoses of adrenal incidentalomas, an adrenal location of neuroblastic tumors should not be forgotten

Persistent systemic microbial translocation, inflammation, and intestinal damage during Clostridioides difficile infection

Background. Clostridioides difficile infection (CDI) might be complicated by the development of nosocomial bloodstream infection (n-BSI). Based on the hypothesis that alteration of the normal gut integrity is present during CDI, we evaluated markers of microbial translocation, inflammation, and intestinal damage in patients with CDI. Methods. Patients with documented CDI were enrolled in the study. For each subject, plasma samples were collected at T0 and T1 (before and after CDI therapy, respectively), and the following markers were evaluated: lipopolysaccharide-binding protein (LPB), EndoCab IgM, interleukin-6, intestinal fatty acid binding protein (I-FABP). Samples from nonhospitalized healthy controls were also included. The study population was divided into BSI+/BSI- and fecal microbiota transplantation (FMT) +/FMT- groups, according to the development of n-BSI and the receipt of FMT, respectively. Results. Overall, 45 subjects were included; 8 (17.7%) developed primary n-BSI. Markers of microbial translocation and intestinal damage significantly decreased between T0 and T1, however, without reaching values similar to controls (P < .0001). Compared with BSI-, a persistent high level of microbial translocation in the BSI+ group was observed. In the FMT+ group, markers of microbial translocation and inflammation at T1 tended to reach control values. Conclusions. CDI is associated with high levels of microbial translocation, inflammation, and intestinal damage, which are still present at clinical resolution of CDI. The role of residual mucosal perturbation and persistence of intestinal cell damage in the development of n-BSI following CDI, as well as the possible effect of FMT in the restoration of mucosal integrity, should be further investigated

Identification and Measurement of Carbonic Anhydrase-II Molecule Numbers in the Rat Carotid Body

Carbonic anhydrase (CA) in the carotid body (CB) plays an important role in the maintenance of blood PO2 and PCO2/pH homeostasis by regulating ventilation. It has been observed that the activity of CA in the rabbit CB is stronger under hypoxic conditions than under normoxic and hyperoxic conditions. In conditions of chronic hypoxia, the volume of the CB increases significantly because the number of type I and II cells increases. So far, the number of CA molecules in the CB has not been assessed. We develop a technique to quantify the number of CA molecules in the CB. The CBs were dissected out from 8 rats, immediately frozen with liquid nitrogen, pulverized and centrifuged. The proteins extracted from CB tissue were heat-denatured and separated by electrophoresis on a 12.5% denatured-polyacrylamide gel (SDSPAGE); a 31 kDa protein band was determined which reacted with a rabbit polyclonal antibody specific for rat CA-II in Western blot analysis. The immunoreactive 31 kDa CA-II protein was detected and quantified by laser scanner densitometry using 125I-rProtein A as a tracer. The mean 125I radioactivity emitted by the antibody bound CA-II was 31277 cpm. This value corresponds to 4.57 ng CA-II. When compared with a rat CA-II calibration curve, an average of number of 3.54 x 107 CA-II molecules were quantified for 1 µg of whole CB tissue. This is a sensitive and accurate radioimmunoassay technique and may be useful in future studies on the role of CA-II in different pathophysiologic conditions