Discrete spectra and damped waves in quasilinear theory

Discrete spectra and damped waves in quasilinear theor

Shock-like solutions of the electrostatic Vlasov equation

Shock like solutions of electrostatic Vlasov equatio

Magnetic dynamo action in two-dimensional turbulent magneto-hydrodynamics

Two-dimensional magnetohydrodynamic turbulence is explored by means of numerical simulation. Previous analytical theory, based on non-dissipative constants of the motion in a truncated Fourier representation, is verified by following the evolution of highly non-equilibrium initial conditions numerically. Dynamo action (conversion of a significant fraction of turbulent kinetic energy into long-wavelength magnetic field energy) is observed. It is conjectured that in the presence of dissipation and external forcing, a dual cascade will be observed for zero-helicity situations. Energy will cascade to higher wave numbers simultaneously with a cascade of mean square vector potential to lower wave numbers, leading to an omni-directional magnetic energy spectrum which varies as 1/k 3 at lower wave numbers, simultaneously with a buildup of magnetic excitation at the lowest wave number of the system. Equipartition of kinetic and magnetic energies is expected at the highest wave numbers in the system

Bayesian inference of natural selection from allele frequency time series

The advent of accessible ancient DNA technology now allows the direct ascertainment of allele frequencies in ancestral populations, thereby enabling the use of allele frequency time series to detect and estimate natural selection. Such direct observations of allele frequency dynamics are expected to be more powerful than inferences made using patterns of linked neutral variation obtained from modern individuals. We develop a Bayesian method to make use of allele frequency time series data and infer the parameters of general diploid selection, along with allele age, in non-equilibrium populations. We introduce a novel path augmentation approach, in which we use Markov chain Monte Carlo to integrate over the space of allele frequency trajectories consistent with the observed data. Using simulations, we show that this approach has good power to estimate selection coefficients and allele age. Moreover, when applying our approach to data on horse coat color, we find that ignoring a relevant demographic history can significantly bias the results of inference. Our approach is made available in a C++ software package.Comment: 27 page