45 research outputs found
Large magnetoresistances and non-Ohmic conductivity in EuWO[1+x]N[2-x]
The magnetic field and voltage dependent electronic transport properties of EuWO[1+x]N[2-x] ceramics are reported. Large negative magnetoresistances are observed at low temperatures, up to 70% in the least doped (x=0.09) material. Non-Ohmic conduction emerges below the 12 K Curie transition. This is attributed to a microstructure of ferromagnetic conducting and antiferromagnetic insulating regions resulting from small spatial fluctuations in the chemical doping
A Network of Conformational Transitions Revealed by Molecular Dynamics Simulations of the Binary Complex of <i>Escherichia coli</i> 6âHydroxymethyl-7,8-dihydropterin Pyrophosphokinase with MgATP
6-Hydroxymethyl-7,8-dihydropterin
pyrophosphokinase (HPPK) catalyzes
the first reaction in the folate biosynthetic pathway. Comparison
of its X-ray and nuclear magnetic resonance structures suggests that
the enzyme undergoes significant conformational change upon binding
to its substrates, especially in three catalytic loops. Experimental
research has shown that, in its binary form, even bound by analogues
of MgATP, loops 2 and 3 remain rather flexible; this raises questions
about the putative large-scale induced-fit conformational change of
the HPPKâMgATP binary complex. In this work, long-time all-atomic
molecular dynamics simulations were conducted to investigate the loop
dynamics in this complex. Our simulations show that, with loop 3 closed,
multiple conformations of loop 2, including the open, semiopen, and
closed forms, are all accessible to the binary complex. These results
provide valuable structural insights into the details of conformational
changes upon 6-hydroxymethyl-7,8-dihydropterin (HP) binding and biological
activities of HPPK. Conformational network analysis and principal
component analysis related to the loops are also discussed
Programmed Synthesis of Sn<sub>3</sub>N<sub>4</sub> Nanoparticles via a Soft Chemistry Approach with Urea: Application for Ethanol Vapor Sensing
Metal nitrides are a significant
class of multifunctional materials
that have attracted a huge and ever-increasing interest for their
new structural and redox chemical, as well as physical, characteristics.
In this work, we present a designed synthesis of Sn<sub>3</sub>N<sub>4</sub> nanoparticles through a soft urea route for the first time.
The strategy includes the synthesis of gel-like tinâurea precursor
and subsequent transformation to Sn<sub>3</sub>N<sub>4</sub> nanoparticles
via thermal treatment of the as-prepared precursor under NH<sub>3</sub> flow. Various techniques were employed to characterize the structure
and morphology of the as-prepared Sn<sub>3</sub>N<sub>4</sub> samples.
When innovatively utilized as sensing material for a gas sensor, Sn<sub>3</sub>N<sub>4</sub> nanoparticles exhibited high sensitivity, excellent
cyclability, and long-term stability to ethanol at the operating temperature
of 120 °C, which is lower than those of metal oxide-based ethanol
sensors. This research work provides an efficient method for preparing
Sn<sub>3</sub>N<sub>4</sub>nanoparticles that are promising sensing
materials for ethanol gas sensors
Mesoporous Ti<sub>0.5</sub>Cr<sub>0.5</sub>N Supported PdAg Nanoalloy as Highly Active and Stable Catalysts for the Electro-oxidation of Formic Acid and Methanol
We report a robust noncarbon Ti<sub>0.5</sub>Cr<sub>0.5</sub>N support synthesized by an efficient solidâsolid phase separation method. This ternary nitride exhibits highly porous, sintered, and random network structure with a crystallite size of 20â40 nm, resulting in a high specific surface area. It is not only kinetically stable in both acid and alkaline media, but also electrochemically stable in the potential range of fuel cell operation. Two typical anode reactions, formic acid oxidation in acid media and methanol oxidation in alkaline media, are employed to investigate the possibility of Ti<sub>0.5</sub>Cr<sub>0.5</sub>N as an alternative to carbon. Bimetallic PdAg nanoparticles (âź4 nm) act as anode catalysts for the two anode reactions. PdAg/Ti<sub>0.5</sub>Cr<sub>0.5</sub>N exhibits much higher mass activity and durability for the two reactions than PdAg/C and Pd/C catalyst, suggesting that mesoporous Ti<sub>0.5</sub>Cr<sub>0.5</sub>N is a very promising support in both acid and alkaline media
Convenient Size Analysis of Nanoplastics on a Microelectrode
Chemical
recycling is a promising approach to reduce plastic pollution.
Timely and accurate size analysis of produced nanoplastics is necessary
to monitor the process and assess the quality of chemical recycling.
In this work, a sandwich-type microelectrode sensor was developed
for the size assessment of nanoplastics. β-Mercaptoethylamine
was modified on the microelectrode to enhance its surface positive
charge density. Polystyrene (PS) nanoplastics were captured on the
sensor through electrostatic interactions. Ferrocene was used as an
electrochemical beacon and attached to PS via hydrophobic interactions.
The results show a nonlinear dependence of the sensorâs current
response on the PS particle size. The size resolving ability of the
microelectrode is mainly attributed to the small size of the electrode
and the resulting attenuation of the electric field strength. For
mixed samples with different particle sizes, this method can provide
accurate average particle sizes. Through an effective pretreatment
process, the method can be applied to PS nanoplastics with different
surface properties, ensuring its application in evaluating different
chemical recycling methods
Electrochemical Biosensing Platform Using Hydrogel Prepared from Ferrocene Modified Amino Acid as Highly Efficient Immobilization Matrix
To
increase the loading of glucose oxidase (GOx) and simplify glucose
biosensor fabrication, hydrogel prepared from ferrocene (Fc) modified
amino acid phenylalanine (Phe, F) was utilized for the incorporation
of GOx. The synthesized hydrogel displays good biocompatibility and
contains a significant number of Fc moieties, which can be considered
as an ideal matrix to immobilize enzymes for the preparation of mediator-based
biosensors. The hydrogel was studied by scanning electron microscopy,
which indicated that it was composed of nanofibers with a diameter
of around 50â100 nm and length extended to 1 mm. With the addition
of GOx into the hydrogel and by directly dropping the resulting biocomposite
onto the electrode surface, a glucose biosensor, that displays good
performance due to improved enzyme loading and efficient electron
transfer, can be simply constructed. The favorable network structure
and good biocompatibility of the hydrogel could effectively avoid
enzyme leakage and maintain the bioactivity of the enzymes, which
resulted in good stability of the biosensor. The biosensor was utilized
for the detection of glucose in blood samples with results comparable
to those obtained from the hospital. The hydrogel as a functional
component of an amperometric biosensor has implications for future
development of biosensors and for clinical applications
Molecular Dynamics Simulations of the <i>Escherichia coli</i> HPPK Apo-enzyme Reveal a Network of Conformational Transitions
6-Hydroxymethyl-7,8-dihydropterin
pyrophosphokinase (HPPK) catalyzes
the first reaction in the folate biosynthetic pathway. Comparison
of its X-ray and nuclear magnetic resonance structures suggests that
the enzyme undergoes significant conformational change upon binding
to its substrates, especially in three catalytic loops. Experimental
research has shown that even when confined by crystal contacts, loops
2 and 3 remain rather flexible when the enzyme is in its apo form,
raising questions about the putative large-scale induced-fit conformational
change of HPPK. To investigate the loop dynamics in a crystal-free
environment, we performed conventional molecular dynamics simulations
of the apo-enzyme at two different temperatures (300 and 350 K). Our
simulations show that the crystallographic <i>B</i>-factors
considerably underestimate the loop dynamics; multiple conformations
of loops 2 and 3, including the open, semi-open, and closed conformations
that an enzyme must adopt throughout its catalytic cycle, are all
accessible to the apo-enzyme. These results revise our previous view
of the functional mechanism of conformational change upon MgATP binding
and offer valuable structural insights into the workings of HPPK.
In this paper, conformational network analysis and principal component
analysis related to the loops are discussed to support the presented
conclusions
Silver Nanoclusters-Based Fluorescence Assay of Protein Kinase Activity and Inhibition
A simple
and sensitive fluorescence method for monitoring the activity
and inhibition of protein kinase (PKA) has been developed using polycytosine
oligonucleotide (dC<sub>12</sub>)-templated silver nanoclusters (Ag
NCs). Adenosine-5â˛-triphosphate (ATP) was found to enhance
the fluorescence of Ag NCs, while the hydrolysis of ATP to adenosine
diphosphate (ADP) by PKA decreased the fluorescence of Ag NCs. Compared
to the existing methods for kinase activity assay, the developed method
does not involve phosphorylation of the substrate peptides, which
significantly simplifies the detection procedures. The method exhibits
high sensitivity, good selectivity, and wide linear range toward PKA
detection. The inhibition effect of kinase inhibitor H-89 on the activity
of PKA was also studied. The sensing protocol was also applied to
the assay of drug-stimulated activation of PKA in HeLa cell lysates
Electronic tuning of two metals and colossal magnetoresistances in EuWO1+ xN2- x perovskites
A remarkable electronic flexibility and colossal magnetoresistance effects have been discovered in the perovskite oxynitrides EuWO1+xN 2-x. Ammonolysis of Eu2W2O9 yields scheelite-type intermediates EuWO4-yNy with a very small degree of nitride substitution (y = 0.04) and then EuWO1+xN 2-x perovskites that show a wide range of compositions -0.16 0 materials have chemical reduction of W (electron doping of the W:5d band). Hence, both the Eu and W oxidation states and the hole/electron doping are tuned by varying the O/N ratio. EuWO1+xN2-x phases order ferromagnetically at 12 K, and colossal magnetoresistances (CMR) are observed in the least doped (x = -0.04) sample. Distinct mechanisms for the hole and electron magnetotransport regimes are identified. Š 2010 American Chemical Society
Quasiclassical Trajectory Studies of the O(<sup>3</sup>P) + CX<sub>4</sub>(<i>v</i><sub><i>k</i></sub> = 0, 1) â OX(<i>v</i>) + CX<sub>3</sub>(<i>n</i><sub>1</sub><i>n</i><sub>2</sub><i>n</i><sub>3</sub><i>n</i><sub>4</sub>) [X = H and D] Reactions on an Ab Initio Potential Energy Surface
We report quasiclassical trajectory
calculations of the integral
and differential cross sections and the mode-specific product state
distributions for the âcentral-barrierâ OÂ(<sup>3</sup>P) + CH<sub>4</sub>/CD<sub>4</sub>(<i>v</i><sub><i>k</i></sub> = 0, 1) [<i>k</i> = 1, 2, 3, 4] reactions
using a full-dimensional ab initio potential energy surface. The mode-specific
vibrational distributions for the polyatomic methyl products are obtained
by doing a normal-mode analysis in the Eckart frame, followed by standard
histogram binning (HB) and energy-based Gaussian binning (1GB). The
reactant bending excitations slightly enhance the reactivity, whereas
stretching excitations activate the reaction more efficiently. None
of the reactant vibrational excitations is as efficient as an equivalent
amount of translational energy to promote the reactions. The excitation
functions without product zero-point energy (ZPE) constraint are in
good agreement with previous 8-dimensional quantum mechanical (QM)
results for the ground-state and stretching-excited O + CH<sub>4</sub> reactions, whereas for the bending-excited reactions the soft ZPE
constraint, which is applied to the sum of the product vibrational
energies, provides better agreement with the QM cross sections. All
angular distributions show the dominance of backward scattering indicating
a direct rebound mechanism, in agreement with experiment. The title
reactions produce mainly OH/ODÂ(<i>v</i> = 0) products for
all the initial states. HB significantly overestimates the populations
of OH/ODÂ(<i>v</i> = 1), especially in the energetic threshold
regions, whereas 1GB provides physically correct results. The CH<sub>3</sub>/CD<sub>3</sub> vibrational distributions show dominant populations
for ground (<i>v</i> = 0), umbrella-excited (<i>v</i><sub>2</sub> = 1, 2), in-plane-bending-excited (<i>v</i><sub>4</sub> = 1), and <i>v</i><sub>2</sub> + <i>v</i><sub>4</sub> methyl product states. Neither translational energy
nor reactant vibrational excitation transfers significantly into product
vibrations