6 research outputs found
Iodination of carbohydrate-derived 1,2-oxazines to enantiopure 5-iodo-3,6 -dihydro-2H-1,2-oxazines and subsequent palladium-catalyzed cross-coupling reactions
Iodination of carbohydrate-derived 3,6-dihydro-2H-1,2-oxazines of type 3 using
iodine and pyridine in DMF furnished 5-iodo-substituted 1,2-oxazine
derivatives 4 with high efficacy. The alkenyl iodide moiety of 1,2-oxazine
derivatives syn-4 and anti-4 was subsequently exploited for the introduction
of new functionalities at the C-5 position by applying palladium-catalyzed
carbon–carbon bond-forming reactions such as Sonogashira, Heck, or Suzuki
coupling reactions as well as a cyanation reaction. These cross-coupling
reactions led to a series of 5-alkynyl-, 5-alkenyl-, 5-aryl- and 5-cyano-
substituted 1,2-oxazine derivatives being of considerable interest for further
synthetic elaborations. This was exemplarily demonstrated by the hydrogenation
of syn-21 and anti-24 and by a click reaction of a 5-alkynyl-substituted
precursor
Synthesis and Properties of 6′-Fluoro-tricyclo-DNA
The synthesis of the two fluorinated tricyclic nucleosides 6?-F-tc-T and 6?-F-tc-5MeC, as well as the corresponding building blocks for oligonucleotide assembly, was accomplished. An X-ray analysis of N4-benzoylated 6?-F-tc-5MeC reavealed a 2?-exo (north) conformation of the furanose ring, characterizing it as an RNA mimic. In contrast to observations in the bicyclo-DNA series, no short contact between the fluorine atom and the H6 of the base, reminiscent of a nonclassical F···H hydrogen bond, could be observed. Tm measurements of modified oligodeoxynucleotides with complementary RNA showed slightly sequence-dependent duplex stabilization profiles with maximum ?Tm/mod values of +4.5 °C for 6?-F-tc-5MeC and +1 °C for 6?-F-tc-T. In comparison with parent tc-modified oligonucleotides, no relevant changes in Tm were detected, attributing the fluorine substituent a neutral role in RNA affinity. A structural analysis of duplexes with DNA and RNA by CD-spectroscopy revealed a shift from B- to A-type conformation induced by the 6?-F-tc-nucleosides. This is not a specific ?fluorine effect?, as the same is also observed for the parent tc-modifications. The two fluorinated tc-nucleosides were also incorporated into a pure tricyclo-DNA backbone and showed no discrimination in Tm with complementary RNA, demonstrating that 6?-F substitution is also compatible within fully modified tc-oligonucleotides
2′-Fluorination of Tricyclo-DNA Controls Furanose Conformation and Increases RNA Affinity
The
synthesis of 2′-fluoro tricyclo-DNA pyrimidine nucleosides
with fluorine in the ribo-configuration and their incorporation into
oligodeoxynucleotides was accomplished. Unlike the parent tc-T nucleoside,
the 2′F-RNA-tc-T unit occurs in the 2′-exo conformation
in the crystal. Specifically, F-RNA-tc-T was found to stabilize duplexes
with RNA by +2 to +4 °C in <i>T</i><sub>m</sub>/mod.
F-RNA-tc-nucleosides mix well with the DNA backbone and thus open
up possibilities of using shorter and mixed-(DNA/tc-DNA) backbone
oligonucleotides for therapeutic applications
Synthesis and Properties of 6′-Fluoro-tricyclo-DNA
The synthesis of the two fluorinated
tricyclic nucleosides 6′-F-tc-T
and 6′-F-tc-5<sup>Me</sup>C, as well as the corresponding building
blocks for oligonucleotide assembly, was accomplished. An X-ray analysis
of N<sup>4</sup>-benzoylated 6′-F-tc-<sup>5Me</sup>C reavealed
a 2′-exo (north) conformation of the furanose ring, characterizing
it as an RNA mimic. In contrast to observations in the bicyclo-DNA
series, no short contact between the fluorine atom and the H6 of the
base, reminiscent of a nonclassical F···H hydrogen
bond, could be observed. <i>T</i><sub>m</sub> measurements
of modified oligodeoxynucleotides with complementary RNA showed slightly
sequence-dependent duplex stabilization profiles with maximum Δ<i>T</i><sub>m</sub>/mod values of +4.5 °C for 6′-F-tc-<sup>5Me</sup>C and +1 °C for 6′-F-tc-T. In comparison with
parent tc-modified oligonucleotides, no relevant changes in <i>T</i><sub>m</sub> were detected, attributing the fluorine substituent
a neutral role in RNA affinity. A structural analysis of duplexes
with DNA and RNA by CD-spectroscopy revealed a shift from B- to A-type
conformation induced by the 6′-F-tc-nucleosides. This is not
a specific “fluorine effect”, as the same is also observed
for the parent tc-modifications. The two fluorinated tc-nucleosides
were also incorporated into a pure tricyclo-DNA backbone and showed
no discrimination in <i>T</i><sub>m</sub> with complementary
RNA, demonstrating that 6′-F substitution is also compatible
within fully modified tc-oligonucleotides
Applications of Modern Technologies in the Production of Aircraft Propeller Prototype
In the field of engineering relatively new designs and manufacturing processes are constantly emerging. These changes are often seen in designing and manufacturing of prototypes or in single part production. We decided to analyse an aircraft propeller prototype using modern technologies. Existing aircraft blade design was converted to digital models which were analysed