AliceDennis_sequences.zip

Alignment files in FASTA format. There are 4 species and three genes, each in an individual file. The 4 species are: (1) Melampus coffeus, (2) Melampus bidentatus cryptic species NORTH, (3) Melampus bidentatus cryptic species SOUTH, (4) Melampus bidentatus cryptic species GULF. The 3 genes are: (1) Histone H3 (2) Cytochrome oxidase I (CO1) and (3) MCP, which has been Probable mitochondrial phosphate carrier protein

SNP036_oculina_bait_reads.fq

file containing the sequences generated from the symbiont-free coral colony used for sequence capture approac

2015_coralv3_vcfref595

Fasta file containing the entire contig sequence

Genet+phased

Nexus file containing sequences for all Oculina patagonica and several Cladocora colonies genotyped for a nuclear gene

Structure/GenoDive input file

Input file generated for Structure and GenoDiv

2015_coralv3

VCF file containing SNP