IL1B and DEFB1 Polymorphisms Increase Susceptibility to Invasive Mold Infection After Solid-Organ Transplantation

Background. Single-nucleotide polymorphisms (SNPs) in immune genes have been associated with susceptibility to invasive mold infection (IMI) among hematopoietic stem cell but not solid-organ transplant (SOT) recipients. Methods. Twenty-four SNPs from systematically selected genes were genotyped among 1101 SOT recipients (715 kidney transplant recipients, 190 liver transplant recipients, 102 lung transplant recipients, 79 heart transplant recipients, and 15 recipients of other transplants) from the Swiss Transplant Cohort Study. Association between SNPs and the end point were assessed by log-rank test and Cox regression models. Cytokine production upon Aspergillus stimulation was measured by enzyme-linked immunosorbent assay in peripheral blood mononuclear cells (PBMCs) from healthy volunteers and correlated with relevant genotypes. Results. Mold colonization (n = 45) and proven/probable IMI (n = 26) were associated with polymorphisms in the genes encoding interleukin 1β (IL1B; rs16944; recessive mode, P = .001 for colonization and P = .00005 for IMI, by the log-rank test), interleukin 1 receptor antagonist (IL1RN; rs419598; P = .01 and P = .02, respectively), and β-defensin 1 (DEFB1; rs1800972; P = .001 and P = .0002, respectively). The associations with IL1B and DEFB1 remained significant in a multivariate regression model (P = .002 for IL1B rs16944; P = .01 for DEFB1 rs1800972). The presence of 2 copies of the rare allele of rs16944 or rs419598 was associated with reduced Aspergillus-induced interleukin 1β and tumor necrosis factor α secretion by PBMCs. Conclusions. Functional polymorphisms in IL1B and DEFB1 influence susceptibility to mold infection in SOT recipients. This observation may contribute to individual risk stratificatio

An electron-impact cross section data set (10 eV–1 keV) of DNA constituents based on consistent experimental data A requisite for Monte Carlo simulations

International audienceThis work provides the first cross section data set of DNA constituents for an impact of electrons in the energy range between about 10 eV and 1 keV on a DNA target. The data set is designed for an implementation in Monte Carlo simulations and consists of model functions, taking into account elastic scattering, ionization and excitation interactions with the DNA constituents tetrahydrofuran, trimethylphosphate, pyrimidine and purine. It was developed on the basis of experimentally determined absolute differential and total scattering cross sections in accordance with the available literature data. The data set will be available in the Geant4-DNA toolkit to allow secondary electron transport in a DNA-like medium down to the ionization threshold. © 2016 Elsevier Lt

Sources and movements of marine turtles in the Gulf of Venezuela: regional and local assessments

Marine turtles are challenging species to protect because they occur over large geographic scales. Tagging individual turtles at nesting beaches and foraging areas, and the resulting mark-recapture data sets have gradually enabled us to understand marine turtle migratory behaviour and dispersal. Within the Caribbean region, several turtle tagging projects have led to longer-term evaluations and assessments of connectivity. Thus, marine turtle mark-recapture data is important for developing conservation strategies at regional-scale. In this study, we analyse turtle tagging data from the Gulf of Venezuela to determine regional (Caribbean and Atlantic geographic level) and local (within the Gulf of Venezuela) links. To achieve this, we retrieved, compiled, and analysed multiple databases with records of marine turtles that were tagged and then recaptured in the Gulf of Venezuela. Sixty-six tag return records were evaluated, 43 from animals initially tagged outside of the Gulf of Venezuela and then recaptured inside, plus 23 records retrieved from turtles that were tagged and recaptured within the Gulf of Venezuela. We found evidence of connectivity between 12 different locations where initial tagging events occurred, eight from other feeding areas and four from nesting beaches. We described four different movement patterns for 23 turtles tagged and re-captured within the Gulf of Venezuela. Most of the recapture records we obtained occurred after the turtles were known, or presumed, to have been killed by local fishers. Hence, knowing patterns of dispersal and connectivity are crucial to improving local and regional conservation and threat mitigation