339 research outputs found
A Mobile Money Solution for Illiterate Users
Existing mobile money platforms have text based interfaces and target literate people. Illiterate people, without the assistance of literate individuals, cannot use such platforms. Applying user-centered requirements gathered in an Ethiopian context, this paper presents the design and development of a mobile money solution that targets illiterate people. Particular emphasis is given to how illiterate users deal with cash money in their everyday life and how such practices can be mapped into financial technology design. Given the ubiquity of mobile telephony in Africa, our solution is based on the widely available, relatively inexpensive and open source Android mobile web platform. The proposed system enables illiterate individuals to count money bills, while providing the facility to accept and make payments. In so doing, we provide an example of how a pervasive technology such as smartphones can empower a hitherto often neglected user category of illiterate users
Effect od Soybean/Cassava Flour Blend in the Proximate Composition of Ethiopian Traditional Bread Prepared from Quality Protein Maize
The effect of soybean and cassava flour blend on the proximate composition of Ethiopian traditional bread prepared from quality protein maize (QPM) was tested. Normal maize and quality protein maize grains were dried, cleaned and milled using a laboratory-scale mill. Similarly, soybean seeds were roasted, boiled, decorticated, and milled into the required particle size flour sample. Cassava tubers were also peeled, chopped, dried and milled in a similar fashion. Eventually, the soybean and cassava flour samples were blended individually with the quality protein maize flour in three different proportions: 5:95, 10:90 and 15:85, respectively. Normal maize flour was used as a control for the quality protein maize flour. Then bread samples were prepared from the respective composite flours using the sponge and dough method of bread making commonly used in the country. Both the composite flours and the respective bread samples were then analyzed for their proximate compositions: moisture, ash, crude protein, crude fat, crude fibre and carbohydrate. The proximate analyses indicated that there is a significant difference (p ⤠0.05) in proximate composition of the plain quality protein maize bread (QPMB) and the soybean- or cassava-supplemented quality protein maize bread samples (SSBs and CSBs). The ash, crude protein, crude fat and crude fibre contents of the soybean-supplemented breads increased with progressive increase in the proportion of soybean flour addition. In the case of the cassava-supplemented bread samples, the highest proximate composition values were recorded for the 10% substitution. Moreover, highest values of carbohydrate, 39.83% and 44.08%, were obtained for the 10% soybean-supplemented breads and 10% cassava-supplemented breads, respectively. The use of these locally available and easily produced grains through blending technology of flours can contribute to combat the widespread protein-energy malnutrition (PEM) in Ethiopia. This approach can also serve as an alternative means for having balanced diet especially for the low-income groups of the most food-insecure people in the country.Key words: Maize, soybean/cassava, bread, proximate compositio
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The RIR motif in the scaffold protein XRCC1 mediates a low-affinity interaction with polynucleotide kinase/phosphatase (PNKP) during DNA single-strand break repair
The scaffold protein X-ray repair cross-complementing 1 (XRCC1)interacts with multiple enzymes involved in DNA base excision repair and single-strand break repair(SSBR) and is important for genetic integrity and normal neurological
function. One of the most important interactions of XRCC1 is that with polynucleotide kinase/phosphatase(PNKP), a dual-function DNA kinase/phosphatase that processes damaged DNA termini and that, if mutated, results in ataxia with oculomotor apraxia 4 (AOA4) and microcephaly with early-onset seizures and developmental delay(MCSZ). XRCC1 and PNKP interact via a high-affinity phosphorylationdependent
interaction site in XRCC1 and a fork-head associated domain
in PNKP. Here, we identified using biochemical and biophysical approaches a second PNKP interaction site in XRCC1 that binds PNKP with lower affinity and independently of XRCC1 phosphorylation. However, this interaction nevertheless stimulated PNKP activity and promoted SSBR
and cell survival. The low-affinity interaction site required the highly conserved REV1-interacting (RIR)
motif in XRCC1 and included three critical and evolutionarily invariant phenylalanine residues. We propose
a bipartite interaction model in which the previously identified highaffinity interaction acts as a molecular tether, holding XRCC1 and PNKP together and thereby
promoting the low-affinity interaction identified here, which then stimulates PNKP directly
Genetic diversity assessment of farmersâ and improved potato (Solanum tuberosum) cultivars from Eritrea using simple sequence repeat (SSR) markers
Sixty three potato clones (51 farmersâ and 12 varieties) from Eritrea, 18 and 12 varieties from Kenya and Rwanda, respectively were characterized using 12 highly polymorphic simple sequence repeat (SSR) markers. The study was designed to assess the genetic diversity and varietal distinctness among the different samples. In total, 91 alleles ranging between 2 (STM1053) to 13 (STM0031) alleles per marker were scored. All but 97.8 SSR markers were highly polymorphic with an average PIC value of 0.87 (0.51 to 0.98). All of the 51 farmersâ cultivars were clearly distinct from each other. Samples from Eritrea showed the highest genetic diversity as explained by the diversity index (h). The principal coordinate analysis (PCoA) revealed that the local farmersâ Eritrean samples are different from the Kenyan, Rwandese and even the imported varieties. Genetic distance analysis generated three clusters correlating with the PCoA findings. Cluster I consisted of 45 samples with 6 sub-clusters; Cluster II consisted of 29 samples with a majority (26) from Eritrea while cluster III consisted of 19 samples. Potato materials from Eritrea appeared to cluster separately from the other samples, which reflects a contribution from the Tuberosum germplasm prominent in temperate regions, unlike from the Andigenum germplasm for Kenyan and Rwandan potato materials. Most of the Eritrean samples in cluster I are farmersâ cultivars with intermediate maturity, good performance and better tuber quality characteristics. Cluster II contains mainly the imported variety from Eritrea characterized by late emergence and late maturity. The Kenyan and Rwandese were grouped mainly in Cluster III. In summary, the farmersâ cultivars are distinct from the Kenyan and Rwandese materials and represent more genetic diversity than the varieties imported into Eritrea. This finding is of interest to national breeding program to use the farmerâs materials as source of genetic variation for traits of interest.Keywords: Potato, simple sequence repeat (SSR), principal coordinate analysis (PCoA), cluster analysis, Eritrea, multivariat
Polio Outbreak Response in Ethiopia
Background: Ethiopia had been polio-free for almost four years until December 2004. However, between December 2004 and February 2006, 24 children were paralysed as a result of infection with wild poliovirus imported from the neighbouring country of Sudan. In response, the country has attempted to document the impact of various response measures on the containment of wild poliovirus transmission.
Objectives: This study aims at systematic and epidemiological assessment of the extent of the outbreak, its determinants, and the lessons learned as well as the implications for future control strategies to interrupt wild poliovirus transmission.
Design: A cross-sectional study design with qualitative and quantitative data collection approaches was used to conduct the epidemiologic assessment.
Subjects: All confirmed wild poliovirus cases, and reported acute flaccid paralysis cases in close proximity to the confirmed polio cases were the study subjects. Child caretakers and health service providers were interviewed as part of the investigation.
Results: Between December 2004 and February 2006, eight children from Tigray Regional State, nine children from Amhara Regional State and seven children from Oromia Regional State were paralysed as a result of infection with wild poliovirus type 1. Genetic sequencing demonstrated two separate importations to Ethiopia. Risk factors that may have facilitated spread of the outbreak within the country included gaps in vaccination coverage and interruption of the cold chain system, gaps in acute flaccid paralysis surveillance performance, high population mobility, poor environmental sanitation, crowded living conditions and unsafe drinking water. In response to the outbreak, Ethiopia conducted detailed outbreak investigations within two days of confirmation of the index cases. Large-scale, house-to-house vaccination campaigns were also implemented. As a result, the three regions interrupted the wild poliovirus transmission within the regions within one year of confirmation of the index case.
Conclusion: Outbreak response activities were successful in interrupting the imported wild
poliovirus transmission in Tigray, Amhara and Oromia Regional States of Ethiopia within a oneyear period of time. In Ethiopia, programme strategies should be intensified to contain further spread and prevent future importation of wild poliovirus. Large-scale immunisation campaigns should reach every child, including those isolated by geography, poverty and security. East African Medical Journla Vol. 85 (5) 2008: pp. 222-23
Calpain mediates proteolysis of the voltage-gated sodium channel alpha-subunit
Alterations in the expression, molecular composition, and localization of voltage-gated sodium channels play major roles in a broad range of neurological disorders. Recent evidence identifies sodium channel proteolysis as a key early event after ischemia and traumatic brain injury, further expanding the role of the sodium channel in neurological diseases. In this study, we investigate the protease responsible for proteolytic cleavage of voltage-gated sodium channels (NaChs). NaCh proteolysis occurs after protease activation in rat brain homogenates, pharmacological disruption of ionic homeostasis in cortical cultures, and mechanical injury using an in vitro model of traumatic brain injury. Proteolysis requires Ca2+ and calpain activation but is not influenced by caspase-3 or cathepsin inhibition. Proteolysis results in loss of the full-length {alpha}-subunits, and the creation of fragments comprising all domains of the channel that retain interaction even after proteolysis. Cell surface biotinylation after mechanical injury indicates that proteolyzed NaChs remain in the membrane before noticeable evidence of neuronal death, providing a mechanism for altered action potential initiation, propagation, and downstream signaling events after Ca2+ elevation
Transcript profiling of two alfalfa genotypes with contrasting cell wall composition in stems using a cross-species platform: optimizing analysis by masking biased probes
<p>Abstract</p> <p>Background</p> <p>The GeneChip<sup>ÂŽ </sup><it>Medicago </it>Genome Array, developed for <it>Medicago truncatula</it>, is a suitable platform for transcript profiling in tetraploid alfalfa [<it>Medicago sativa </it>(L.) subsp. <it>sativa</it>]. However, previous research involving cross-species hybridization (CSH) has shown that sequence variation between two species can bias transcript profiling by decreasing sensitivity (number of expressed genes detected) and the accuracy of measuring fold-differences in gene expression.</p> <p>Results</p> <p>Transcript profiling using the <it>Medicago </it>GeneChip<sup>ÂŽ </sup>was conducted with elongating stem (ES) and post-elongation stem (PES) internodes from alfalfa genotypes 252 and 1283 that differ in stem cell wall concentrations of cellulose and lignin. A protocol was developed that masked probes targeting inter-species variable (ISV) regions of alfalfa transcripts. A probe signal intensity threshold was selected that optimized both sensitivity and accuracy. After masking for both ISV regions and previously identified single-feature polymorphisms (SFPs), the number of differentially expressed genes between the two genotypes in both ES and PES internodes was approximately 2-fold greater than the number detected prior to masking. Regulatory genes, including transcription factor and receptor kinase genes that may play a role in development of secondary xylem, were significantly over-represented among genes up-regulated in 252 PES internodes compared to 1283 PES internodes. Several cell wall-related genes were also up-regulated in genotype 252 PES internodes. Real-time quantitative RT-PCR of differentially expressed regulatory and cell wall-related genes demonstrated increased sensitivity and accuracy after masking for both ISV regions and SFPs. Over 1,000 genes that were differentially expressed in ES and PES internodes of genotypes 252 and 1283 were mapped onto putative orthologous loci on <it>M. truncatula </it>chromosomes. Clustering simulation analysis of the differentially expressed genes suggested co-expression of some neighbouring genes on <it>Medicago </it>chromosomes.</p> <p>Conclusions</p> <p>The problems associated with transcript profiling in alfalfa stems using the <it>Medicago </it>GeneChip as a CSH platform were mitigated by masking probes targeting ISV regions and SFPs. Using this masking protocol resulted in the identification of numerous candidate genes that may contribute to differences in cell wall concentration and composition of stems of two alfalfa genotypes.</p
Performance of Local Light Microscopy and the ParaScreen Pan/Pf Rapid Diagnostic Test to Detect Malaria in Health Centers in Northwest Ethiopia
Background: Diagnostic tests are recommended for suspected malaria cases before treatment, but comparative performance of microscopy and rapid diagnostic tests (RDTs) at rural health centers has rarely been studied compared to independent expert microscopy. Methods: Participants (N = 1997) with presumptive malaria were recruited from ten health centers with a range of transmission intensities in Amhara Regional State, Northwest Ethiopia during October to December 2007. Microscopy and ParaScreen Pan/PfH RDT were done immediately by health center technicians. Blood slides were re-examined later at a central laboratory by independent expert microscopists. Results: Of 1,997 febrile patients, 475 (23.8%) were positive by expert microscopists, with 57.7 % P.falciparum, 24.6 % P.vivax and 17.7 % mixed infections. Sensitivity of health center microscopists for any malaria species was.90 % in five health centers (four of which had the highest prevalence),.70 % in nine centers and 44 % in one site with lowest prevalence. Specificity for health center microscopy was very good (.95%) in all centers. For ParaScreen RDT, sensitivity was 70 % in six and,60 % in four centers. Specificity was $90 % in all centers except one where it was 85%. Conclusions: Health center microscopists performed well in nine of the ten health centers; while for ParaScreen RDT they performed well in only six centers. Overall the accuracy of local microscopy exceeded that of RDT for all outcomes. Thi
Identification and genetic diversity of two invasive Pissodes spp. Germar (Coleoptera : Curculionidae) in their introduced range in the southern hemisphere
During the first half of the twentieth
century, two accidental cases of introduction of
Pissodes weevils were recorded from the southern
hemisphere. The weevils in South Africa were identified
as the deodar weevil (Pissodes nemorensis) and
those in South America as the small banded pine
weevil (Pissodes castaneus). Wide distribution of the
two species in their invasive range, general difficulty
in identifying some Pissodes spp., and the varying
feeding and breeding behaviours of the species in
South Africa has necessitated better evidence of
species identity and genetic diversity of both species
and population structure of the species in South Africa.
Barcoding and the Jerry-to-Pat region of the COI gene were investigated. Morphometric data of the South
African species was analysed. Our results confirmed
the introduction of only one Pissodes species of North
American origin to South Africa. However, this
species is not P. nemorensis, but an unrecognized
species of the P. strobi complex or a hybrid between P.
strobi and P. nemorensis. Only P. castaneus, of
European origin, was identified from South America.
We identified ten mitochondrial DNA haplotypes from
South Africa with evidence of moderate genetic
structure among geographic populations. Terminal
leader and bole-feeding weevils did not differ at the
COI locus. A single haplotype was identified from
populations of P. castaneus in South America. Results
of the present study will have implications on quarantine,
research and management of these insect
species.Tree Protection Co-operative Program (TPCP), DST-National Research Foundation (NRF) and the University of Pretoria, South Africa.http://link.springer.com/journal/105302017-08-31hb2017Forestry and Agricultural Biotechnology Institute (FABI)GeneticsZoology and Entomolog
Dendritic Cells Activate and Mature after Infection with Mycobacterium tuberculosis
<p>Abstract</p> <p>Background</p> <p>Dendritic cells (DCs) can take up an array of different antigens, including microorganisms which they can process and present more effectively than any other antigen presenting cell. However, whether the interaction between the human DC and <it>Mycobacterium tuberculosis </it>represents a defense mechanism by the invaded host, or helping the invader to evade the defense mechanism of the host is still not clearly understood.</p> <p>Findings</p> <p>To analyze the interactions between <it>M. tuberculosis </it>and immune cells, human peripheral blood monocyte-derived immature DCs were infected with <it>M. tuberculosis </it>H37Rv wild type strain and flow cytometry was used to analyse cell surface expression markers. The ability of the <it>M. tuberculosis </it>infected DC to induce T cell proliferation using 5 and 6-carboxyfluorescein diacetate succinimidyl ester (CFSE) dilution technique was also investigated. DCs were found to internalize the mycobacteria and show dose dependent infection and necrosis with different multiplicity of infection. Flow cytometry analysis of cell surface expression markers CD40, CD54, CD80, CD83, CD86 and HLA DR in infected DC revealed significant (p < 0.05) up regulation following infection with <it>M. tuberculosis </it>in comparison to immature DC with no stimulation. Lipopolysaccharide (LPS) from <it>Salmonella abortus equi</it>, a known DC maturation agent, was used as a positive control and showed a comparable up regulation of cell surface markers as observed with <it>M. tuberculosis </it>infected DC. It was revealed that the <it>M. tuberculosis </it>infected DC induced T cell proliferation.</p> <p>Conclusion</p> <p>These data clearly demonstrate that <it>M. tuberculosis </it>induces activation and maturation of human monocyte-derived immature DC as well as induces T cell proliferation <it>in vitro</it>.</p
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