Participating institutions in the eagle-i Network.

<p>Participating institutions in the eagle-i Network.</p

Teleost Anatomy Ontology (revision 2012-08-10)

Version 2012-08-10 of the Teleost Anatomy Ontology incorporates major changes in its development by importing terms from the Vertebrate Skeletal Anatomy Ontology

Teleost Anatomy Ontology (revision 1.144)

This data file contains the version (1.144) of the Teleost Anatomy Ontology described in Dahdul et al. (2010). It is a text file in OBO format (http://www.geneontology.org/GO.format.obo-1_2.shtml)

VSAO Workshop Version (OBO format)

This data file contains the workshop version of the Vertebrate Skeletal Anatomy Ontology described in Dahdul et al. (2012). It is a text file in OBO format (http://www.geneontology.org/GO.format.obo-1_2.shtml)

VSAO Revision 2012-11-6 (OBO format)

This data file contains the version (2012-11-6) of the Vertebrate Skeletal Anatomy Ontology described in Dahdul et al. (2012). It is a text file in OBO format (http://www.geneontology.org/GO.format.obo-1_2.shtml)

Representation of a skeletal element with multiple classification criteria.

<p>The ‘tripus’ is directly asserted (solid lines) to be a type of ‘endochondral bone’, <i>part_of</i> the ‘Weberian ossicle set’, <i>part_of</i> ‘vertebra 3′ and to form through the process of (‘<i>participates_in</i>’) ‘intramembranous ossification’. The reasoner infers (dotted lines) the tripus to be a type of ‘membrane bone’ and a ‘Weberian ossicle’, and infers it to participate in ‘endochondral ossification’. Skeletal element terms are shown in blue fill, skeletal subdivision term in green fill, TAO terms in blue font, VSAO terms in black font, and GO process terms in green font.</p

Some skeletal tissues in the VSAO and selected relationships to other tissues, cells, and skeletal elements.

<p>CL terms are shown in yellow fill, tissue terms in grey fill, skeletal element terms in blue fill, and skeletal subdivision terms in green fill.</p

Four high-level classes of skeletal anatomy (‘cell’, ‘skeletal tissue’, ‘skeletal element’, ‘skeletal subdivision’) and their children based on anatomical granularity.

<p>Cell terms (CL) are shown in yellow fill, tissue terms in grey fill, skeletal element terms in blue fill, and skeletal subdivision terms in green fill. Parent classes from CARO in red font. <i>Alligator mississippiensis</i> sectioned maxilla (∼day 27 in ovo; Ferguson stage 19) stained with Mallory's trichrome (A); midsagittally sectioned embryonic head (day 45 in ovo; Ferguson stage 23) in lateral (B) and saggital (C) view, double stained whole-mount (alizarin red and alcian blue).</p

Vertebrate anatomy ontologies and others formally related to VSAO (*applicable to multiple species).

<p>Ontology files can be downloaded from the Open Biological and Biomedical Ontologies Foundry (<a href="http://obofoundry.org/" target="_blank">http://obofoundry.org/</a>).</p

Some skeletal subdivisions and their relationships in the VSAO.

<p>CARO parent term is in red font and VSAO terms in black font.</p