New Records of the Cryptogenic Soft Coral Genus Stragulum (Tubiporidae) from the Eastern Caribbean and the Persian Gulf

The monotypic soft coral genus Stragulum van Ofwegen and Haddad, 2011 (Octocorallia: Malacalcyonacea: Tubiporidae) was originally described from Brazil, southwest Atlantic Ocean. Here, we report the first records of the genus from the eastern Caribbean and the Persian Gulf in the northwest Indian Ocean. We compare the morphological features of specimens, together with molecular data from three commonly used barcoding markers (COI, mtMutS, 28S rDNA) and 308 ultraconserved elements (UCE) and exon loci sequenced using a target-enrichment approach. The molecular and morphological data together suggest that specimens from all three localities are the same species, i.e., Stragulum bicolor van Ofwegen and Haddad, 2011. It is still not possible to establish the native range of the species or determine whether it may be an introduced species due to the limited number of specimens included in this study. However, the lack of historical records, its fouling abilities on artificial substrates, and a growing number of observations support the invasive nature of the species in Brazilian and Caribbean waters and therefore suggest that it may have been introduced into the Atlantic from elsewhere. Interestingly, the species has not shown any invasive behaviour in the Persian Gulf, where it has been found only on natural, rocky substrates. The aim of the present report is to create awareness of this taxon with the hope that this will lead to new records from other localities and help to establish its native range

Demographic changes in Pleistocene sea turtles were driven by past sea level fluctuations affecting feeding habitat availability

Pleistocene environmental changes are generally assumed to have dramatically affected species’ demography via changes in habitat availability, but this is challenging to investigate due to our limited knowledge of how Pleistocene ecosystems changed through time. Here, we tracked changes in shallow marine habitat availability resulting from Pleistocene sea level fluctuations throughout the last glacial cycle (120–14 thousand years ago; kya) and assessed correlations with past changes in genetic diversity inferred from genome-wide SNPs, obtained via ddRAD sequencing, in Caribbean hawksbill turtles, which feed in coral reefs commonly found in shallow tropical waters. We found sea level regression resulted in an average 75% reduction in shallow marine habitat availability during the last glacial cycle. Changes in shallow marine habitat availability correlated strongly with past changes in hawksbill turtle genetic diversity, which gradually declined to ~1/4th of present-day levels during the Last Glacial Maximum (LGM; 26–19 kya). Shallow marine habitat availability and genetic diversity rapidly increased after the LGM, signifying a population expansion in response to warming environmental conditions. Our results suggest a positive correlation between Pleistocene environmental changes, habitat availability and species’ demography, and that demographic changes in hawksbill turtles were potentially driven by feeding habitat availability. However, we also identified challenges associated with disentangling the potential environmental drivers of past demographic changes, which highlights the need for integrative approaches. Our conclusions underline the role of habitat availability on species’ demography and biodiversity, and that the consequences of ongoing habitat loss should not be underestimated

In the aftermath of hurricane Irma: Colonization of a 4-year-old shipwreck by native and non-native corals, including a new cryptogenic species for the Caribbean

Little is known about early coral settlement on shipwrecks with regard to their species and size compositions. Hurricanes in the Caribbean have a long history of sinking ships but a link with new coral settlement is understudied. In 2017, Hurricane Irma caused the sinking of over 300 vessels in the coastal waters of Saint Martin, eastern Caribbean. In 2021, coral settlement was studied on one of them, which included two native, one non-native, and two cryptogenic species. The corals were smaller than 8 cm in diameter. The invasive Tubastraea coccinea was the most abundant scleractinian and was predominantly represented by juveniles. A cryptogenic species, Stragulum bicolor, new for the Caribbean, was the most common octocoral. Because they can be harmful to the environment, shipwrecks should be monitored frequently for the occurrence of non-native species, especially when they are only a few years old

Underwater towed video : a novel method to estimate densities of queen conch (Lobatus gigas; Strombidae) across its depth range

Queen conch (Lobatus gigas) populations living deeper than 20 m are rarely studied, because of the limitations of conventional survey methods using divers [i.e., belt transect (BT), towed-diver].Acrucial management goal for conch populations is to maintain adult densities at adequate levels to ensure reproduction, which is highly density dependent. Therefore, accurate estimates of adult conch densities, both in shallow and deep areas, are essential. The rapid technical progress of video systems has made it possible to develop new cost-effective ecological sampling tools, which can be used to survey areas previously accessible. A lightweight towed video array was used, which was able to survey adult conch throughout the species entire depth range (ca. 0–60 m depth), in a safe and efficient manner. The towed video method (TVM) was compared with a conventional BT method using scuba divers, in its ability to identify adult live and dead conch. A series of intercalibration transects was conducted in a high-complexity (HC) and in a low-complexity (LC) habitat by having the towed video followed by a diver conducting a concurrent standard BT, covering the exact same surface area as the towed video. In both the HC and LC habitat, adult live queen conch had similar counts with both methods. Adult dead conch were not mistaken for live conch but were significantly underestimated with the towed video compared with the BT. The results validate estimate densities of live adult conch in both HC and LC habitats throughout the species depth range

Data underlying the publication: "Spatial dependency in abundance of Queen conch, Aliger gigas, in the Caribbean, indicates the importance of surveying deep-water distributions"

Evaluate how the spatial distribution of a heavily exploited marine gastropod (i.e., Queen conch) varies in response to a number of known biotic and abiotic variables within and between sites that vary in environmental conditions. A novel towed video system complemented belt transects to estimate adult queen conch densities throughout its depth range. Bayesian hierarchical spatial models (Integrated Nested Laplace approximations) modeled distribution patterns of adult conch and indicated that the general patchy distribution pattern and the lack of strong generic location over-crossing relationships between abiotic and biotic factors and adult conch abundance and distribution is likely to at least partly due to this spatial dependency and location-specific factors, that affect different parts of the conch life-history

Supplementary File S1 from The evolution of asymmetric genitalia in Coleoptera

List of all material, collection and voucher details, and sequences used for this study. Sequence accession numbers shown in bold are newly generated in this study, whereas all other ones were previously published. Please note: C. fuliginosus (IBE-AF32) and C. subfuscus (MNCN-AI550) were published in Fresneda et al. (2011) as C. ventricosus and C. tristis, respectively, but later re-identified (I. Ribera and J. Fresneda, pers. comm.

Supplementary File S2 from The evolution of asymmetric genitalia in Coleoptera

Overview of male genital asymmetry in most major coleopteran groups that were represented in Fig. 2 of Hunt et al. (2007). For many taxa, the amount of literature perused was limited, so this list is meant as a first indication, rather than an exhaustive survey, of genital asymmetry in the Coleoptera

Supplementary File S1 from The evolution of asymmetric genitalia in Coleoptera

List of all material, collection and voucher details, and sequences used for this study. Sequence accession numbers shown in bold are newly generated in this study, whereas all other ones were previously published. Please note: C. fuliginosus (IBE-AF32) and C. subfuscus (MNCN-AI550) were published in Fresneda et al. (2011) as C. ventricosus and C. tristis, respectively, but later re-identified (I. Ribera and J. Fresneda, pers. comm.

Diet and growth of juvenile queen conch Lobatus gigas (Gastropoda: Strombidae) in native, mixed and invasive seagrass habitats

Juvenile queen conch are primarily associated with native seagrass such as Thalassia testudinum in large parts of their range in the Caribbean and the southern Gulf of Mexico. Here, a number of non-native seagrass species have been introduced including Halophila stipulacea, which is natural to the Red Sea and the Indo-Pacific. In the Caribbean, H. stipulacea often creates dense continuous mats with little or no sediment exposed, compared to native seagrass, which grows much less dense. We examined the diet and growth of juvenile conch in both native, mixed, and invasive seagrass beds using stable isotope analysis and an in situ growth enclosure experiment. Organic material in the sediment (i.e. benthic diatoms and particulate organic matter) was found to be the most important source of carbon and nitrogen for juvenile queen conch in all 3 habitats investigated, and there was a significantly higher probability of positive growth in the native seagrass compared to the invasive seagrass. Due to the importance of the organic material in the sediment as a source of nutrition for juvenile conch, limited access to the sediment in the invasive seagrass can potentially cause inadequate nutritional conditions to sustain high growth rates. Thus, it is likely that there is a negative effect on juvenile queen conch growth currently inhabiting invasive seagrass beds, compared to native seagrass beds, when other potential sources of nutrition are not available.</p

Diet and growth of juvenile queen conch Lobatus gigas (Gastropoda: Strombidae) in native, mixed and invasive seagrass habitats

<p>Juvenile queen conch are primarily associated with native seagrass such as Thalassia testudinum in large parts of their range in the Caribbean and the southern Gulf of Mexico. Here, a number of non-native seagrass species have been introduced including Halophila stipulacea, which is natural to the Red Sea and the Indo-Pacific. In the Caribbean, H. stipulacea often creates dense continuous mats with little or no sediment exposed, compared to native seagrass, which grows much less dense. We examined the diet and growth of juvenile conch in both native, mixed, and invasive seagrass beds using stable isotope analysis and an in situ growth enclosure experiment. Organic material in the sediment (i.e. benthic diatoms and particulate organic matter) was found to be the most important source of carbon and nitrogen for juvenile queen conch in all 3 habitats investigated, and there was a significantly higher probability of positive growth in the native seagrass compared to the invasive seagrass. Due to the importance of the organic material in the sediment as a source of nutrition for juvenile conch, limited access to the sediment in the invasive seagrass can potentially cause inadequate nutritional conditions to sustain high growth rates. Thus, it is likely that there is a negative effect on juvenile queen conch growth currently inhabiting invasive seagrass beds, compared to native seagrass beds, when other potential sources of nutrition are not available.</p