XX/XY Sex Chromosomes in the South American Dwarf Gecko (\u3cem\u3eGonatodes humeralis\u3c/em\u3e)

Sex-specific genetic markers identified using restriction site-associated DNA sequencing, or RADseq, permits the recognition of a species’ sex chromosome system in cases where standard cytogenetic methods fail. Thus, species with male-specific RAD markers have an XX/XY sex chromosome system (male heterogamety) while species with female-specific RAD markers have a ZZ/ZW sex chromosome (female heterogamety). Here, we use RADseq data from 5 male and 5 female South American dwarf geckos (Gonatodes humeralis) to identify an XX/XY sex chromosome system. This is the first confidently known sex chromosome system in a Gonatodes species. We used a low-coverage de novo G. humeralis genome assembly to design PCR primers to validate the male-specificity of a subset of the sex-specific RADseq markers and describe how even modest genome assemblies can facilitate the design of sex-specific PCR primers in species with diverse sex chromosome systems

Community structure of soil fungi in a novel perennial crop monoculture, annual agriculture, and native prairie reconstruction

The use of perennial crop species in agricultural systems may increase ecosystem services and sustainability. Because soil microbial communities play a major role in many processes on which ecosystem services and sustainability depend, characterization of soil community structure in novel perennial crop systems is necessary to understand potential shifts in function and crop responses. Here, we characterized soil fungal community composition at two depths (0–10 and 10–30 cm) in replicated, long-term plots containing one of three different cropping systems: a tilled three-crop rotation of annual crops, a novel perennial crop monoculture (Intermediate wheatgrass, which produces the grain Kernza®), and a native prairie reconstruction. The overall fungal community was similar under the perennial monoculture and native vegetation, but both were distinct from those in annual agriculture. The mutualist and saprotrophic community subsets mirrored differences of the overall community, but pathogens were similar among cropping systems. Depth structured overall communities as well as each functional group subset. These results reinforce studies showing strong effects of tillage and sampling depth on soil community structure and suggest plant species diversity may play a weaker role. Similarities in the overall and functional fungal communities between the perennial monoculture and native vegetation suggest Kernza® cropping systems have the potential to mimic reconstructed natural systems

Abiotic and biotic context dependency of perennial crop yield

A grant from the One-University Open Access Fund at the University of Kansas was used to defray the author's publication fees in this Open Access journal. The Open Access Fund, administered by librarians from the KU, KU Law, and KUMC libraries, is made possible by contributions from the offices of KU Provost, KU Vice Chancellor for Research & Graduate Studies, and KUMC Vice Chancellor for Research. For more information about the Open Access Fund, please see http://library.kumc.edu/authors-fund.xml.Perennial crops in agricultural systems can increase sustainability and the magnitude of ecosystem services, but yield may depend upon biotic context, including soil mutualists, pathogens and cropping diversity. These biotic factors themselves may interact with abiotic factors such as drought. We tested whether perennial crop yield depended on soil microbes, water availability and crop diversity by testing monocultures and mixtures of three perennial crop species: a novel perennial grain (intermediate wheatgrass—Thinopyrum intermedium-- that produces the perennial grain Kernza®), a potential perennial oilseed crop (Silphium intregrifolium), and alfalfa (Medicago sativa). Perennial crop performance depended upon both water regime and the presence of living soil, most likely the arbuscular mycorrhizal (AM) fungi in the whole soil inoculum from a long term perennial monoculture and from an undisturbed native remnant prairie. Specifically, both Silphium and alfalfa strongly benefited from AM fungi. The presence of native prairie AM fungi had a greater benefit to Silphium in dry pots and alfalfa in wet pots than AM fungi present in the perennial monoculture soil. Kernza did not benefit from AM fungi. Crop mixtures that included Kernza overyielded, but overyielding depended upon inoculation. Specifically, mixtures with Kernza overyielded most strongly in sterile soil as Kernza compensated for poor growth of Silphium and alfalfa. This study identifies the importance of soil biota and the context dependence of benefits of native microbes and the overyielding of mixtures in perennial crops.Perennial Agricultural Project sponsored by the Malone Family Land Preservation FoundationNational Science Foundation (DEB-1556664, DEB- 1738041, OIA 1656006

Pseudo-homogeneous CSTR Simulation of a Fluidized Bed Reactor operating in condensed-mode including Sanchez-Lacombe n-hexane co-solubility effect predictions

Abstract This work explores the impact of the inert condensing agent (ICA) n-hexane in the production of Polyethylene via gasphase condensed mode bed reactor. The gas loaded to these reactors contains mainly ethylene, nitrogen and other reaction agents like hydrogen. But it also includes condensed inert agents like n-hexane. They have an important role in cooling down the bed of the reactor not only because they have a relevant heat capacity but primarily because they can be in a condensed state. As the gas-liquid mixture enters the reactor, the condensed liquid content vaporizes and removes latent heat that way allowing bigger productions. ICA's like hexane seem, in addition, to solubilize the ethylene gas in the amorphous polyethylene of the growing polymer phase (co-solubility effect) enabling even higher polymerization rates. The Sanchez-Lacombe equation of state have been successfully used in predicting the mentioned co-solubility effect of n-hexane in ethylene polymerization. Its lately computational predictions on such subject were used in the current work. This work simulates a reacting system composed by an ethylene/nitrogen/n-hexane gas phase in equilibrium with an ethylene/amorphous polyethylene/n-hexane polymer phase, using a pseudo-homogeneous steady-state CSTR approach. This system was evaluated at 7 bar ethylene, 1 bar nitrogen and within a range of 0.0 -1.0 bar n-hexane, with different operation conditions such as catalyst flowrates, inlet gas temperature and kinetic rate constants. The global results showed that from no hexane in reactor to a pressure of 0.1bar hexane there's a variation of polyethylene production of about 2% (n-hexane co-solubility effect). And as total pressure adds 0.1bar hexane, the polyethylene production variation approximately follows this trend; it is like this as far as inlet stream cooling capacity is not too high (declining temperature and, by extension, kinetics) that it subordinates the n-hexane co-solubility effect. Regarding reactor temperature, there are two distinct behaviours: if the reactor operates in a non-condensed mode (less than 0.4bar hexane), there's a moderate decrease of temperature (2% maximum) with rising hexane pressure. It falls down much faster when the reactor starts to operate in a condensed-mode reaching the 8% variation for each 0.1bar hexane increasing step

A novel approach for preparation of nanocomposites with an excellent rigidity/deformability balance based on reinforced HDPE with halloysite

An innovative approach, designated as supported activator (SA), allows preparation of high density polyethylene (HDPE)-based highly performant hybrid materials. This procedure makes use of a nano-sized supported methylaluminoxane (MAO)-activator, based on halloysite natural nanotubes (HNT), combined with an in situ supporting concept. The new protocol when compared with a more conventional approach gives rise to higher polymerization activities as well as ultimate materials with better morphological features, greater crystallinity, thicker crystals, and highly increased stiffness. Moreover, a remarkable synergy between rigidity and toughness is attained. The Young’s modulus of a film obtained from the nanocomposite with the highest HNT content increases more than 70 % relatively to a pristine HDPE film, while retaining the limit stretching ability of pristine HDPE (more than 800%). A beneficial impact of using a high aspect ratio support such as HNT in the mechanical properties is also observed, when compared to similar HDPE hybrid materials derived from dendrimer-like silica (DS) nanospheres. Interestingly, polymerization activity, polymer features and derived properties found in the ultimate materials are less impacted by support/filler nature than by preparation method. This fact highlights the crucial role of the synthetic methodology used and corroborates the high potential of the SA route for the preparation of high-performance polyethylene-based nanocomposites with an excellent balance between stiffness and deformability.info:eu-repo/semantics/publishedVersio