Gyrotactic phytoplankton in laminar and turbulent flows: a dynamical systems approach

Gyrotactic algae are bottom heavy, motile cells whose swimming direction is determined by a balance between a buoyancy torque directing them upwards and fluid velocity gradients. Gyrotaxis has, in recent years, become a paradigmatic model for phytoplankton motility in flows. The essential attractiveness of this peculiar form of motility is the availability of a mechanistic description which, despite its simplicity, revealed predictive, rich in phenomenology, easily complemented to include the effects of shape, feed-back on the fluid and stochasticity (e.g. in cell orientation). In this review we consider recent theoretical, numerical and experimental results to discuss how, depending on flow properties, gyrotaxis can produce inhomogeneous phytoplankton distributions on a wide range of scales, from millimeters to kilometers, in both laminar and turbulent flows. In particular, we focus on the phenomenon of gyrotactic trapping in nonlinear shear flows and in fractal clustering in turbulent flows. We shall demonstrate the usefulness of ideas and tools borrowed from dynamical systems theory in explaining and interpreting these phenomena

Clustering and Turbophoresis in a Shear Flow without Walls

We investigate the spatial distribution of inertial particles suspended in the bulk of a turbulent inhomogeneous flow. By means of direct numerical simulations of particle trajectories transported by the turbulent Kolmogorov flow, we study large and small scale mechanisms inducing inhomogeneities in the distribution of heavy particles. We discuss turbophoresis both for large and weak inertia, providing heuristic arguments for the functional form of the particle density profile. In particular, we argue and numerically confirm that the turbophoretic effect is maximal for particles of intermediate inertia. Our results indicate that small-scale fractal clustering and turbophoresis peak in different ranges in the particles' Stokes number and the separation of the two peaks increases with the flow's Reynolds number.Comment: 13 pages, 5 figure

Geotropic tracers in turbulent flows: a proxy for fluid acceleration

We investigate the statistics of orientation of small, neutrally buoyant, spherical tracers whose center of mass is displaced from the geometrical center. If appropriate-sized particles are considered, a linear relation can be derived between the horizontal components of the orientation vector and the same components of acceleration. Direct numerical simulations are carried out, showing that such relation can be used to reconstruct the statistics of acceleration fluctuations up to the order of the gravitational acceleration. Based on such results, we suggest a novel method for the local experimental measurement of accelerations in turbulent flows.Comment: 14 pages, 6 figure

Appendiceal abscess in a giant left-sided inguinoscrotal hernia: a rare case of Amyand hernia

The hernia of Amyand is an inguinal hernia containing the appendix in the sac. It is a rare pathology often diagnosed only intra-operatively. We report a case even more rare of a giant left-sided inguinoscrotal Amyand hernia with appendiceal abscess without clinical findings of incarceration/strangulation, occlusion, perforation, or acute scrotum and with the presence in the sac of the caecum and other anatomical structures (last ileal loops, bladder and omentum). The 68-years-old man patient successfully underwent surgical treatment only through the hernia sac (meshless repair according to Postempski technique)

Turbulent fluid acceleration generates clusters of gyrotactic microorganisms

The motility of microorganisms is often biased by gradients in physical and chemical properties of their environment, with myriad implications on their ecology. Here we show that fluid acceleration reorients gyrotactic plankton, triggering small-scale clustering. We experimentally demonstrate this phenomenon by studying the distribution of the phytoplankton Chlamydomonas augustae within a rotating tank and find it to be in good agreement with a new, generalized model of gyrotaxis. When this model is implemented in a direct numerical simulation of turbulent flow, we find that fluid acceleration generates multi-fractal plankton clustering, with faster and more stable cells producing stronger clustering. By producing accumulations in high-vorticity regions, this process is fundamen- tally different from clustering by gravitational acceleration, expanding the range of mechanisms by which turbulent flows can impact the spatial distribution of active suspensions.Comment: 5 pages, 4 figure