20 research outputs found
Clinical Score and Machine Learning-Based Model to Predict Diagnosis of Primary Aldosteronism in Arterial Hypertension
Primary aldosteronism (PA) is the cause of arterial hypertension in 4% to 6% of patients, and 30% of patients with PA are affected by unilateral and surgically curable forms. Current guidelines recommend screening for PA approximate to 50% of patients with hypertension on the basis of individual factors, while some experts suggest screening all patients with hypertension. To define the risk of PA and tailor the diagnostic workup to the individual risk of each patient, we developed a conventional scoring system and supervised machine learning algorithms using a retrospective cohort of 4059 patients with hypertension. On the basis of 6 widely available parameters, we developed a numerical score and 308 machine learning-based models, selecting the one with the highest diagnostic performance. After validation, we obtained high predictive performance with our score (optimized sensitivity of 90.7% for PA and 92.3% for unilateral PA [UPA]). The machine learning-based model provided the highest performance, with an area under the curve of 0.834 for PA and 0.905 for diagnosis of UPA, with optimized sensitivity of 96.6% for PA, and 100.0% for UPA, at validation. The application of the predicting tools allowed the identification of a subgroup of patients with very low risk of PA (0.6% for both models) and null probability of having UPA. In conclusion, this score and the machine learning algorithm can accurately predict the individual pretest probability of PA in patients with hypertension and circumvent screening in up to 32.7% of patients using a machine learning-based model, without omitting patients with surgically curable UPA
Albumin-Binding PSMA Ligands: Optimization of the Tissue Distribution Profile
The prostate-specific membrane antigen
(PSMA) has emerged as an attractive prostate cancer associated target
for radiotheragnostic application using PSMA-specific radioligands.
The aim of this study was to design new PSMA ligands modified with
an albumin-binding moiety in order to optimize their tissue distribution
profile. The compounds were prepared by conjugation of a urea-based
PSMA-binding entity, a DOTA chelator, and 4-(<i>p</i>-iodophenyl)butyric acid using multistep solid phase synthesis. The three ligands (PSMA-ALB-02,
PSMA-ALB-05, and PSMA-ALB-07) were designed with varying linker entities.
Radiolabeling with <sup>177</sup>Lu was performed at a specific activity
of up to 50 MBq/nmol resulting in radioligands of >98% radiochemical
purity and high stability. In vitro investigations revealed high binding
of all three PSMA radioligands to mouse (>64%) and human plasma
proteins (>94%). Uptake and internalization into PSMA-positive
PC-3 PIP tumor cells was equally high for all radioligands. Negligible
accumulation was found in PSMA-negative PC-3 flu cells, indicating
PSMA-specific binding of all radioligands. Biodistribution and imaging
studies performed in PC-3 PIP/flu tumor-bearing mice showed enhanced
blood circulation of the new radioligands when compared to the clinically
employed <sup>177</sup>Lu-PSMA-617. The PC-3 PIP tumor uptake of all
three radioligands was very high (76.4 ± 2.5% IA/g, 79.4 ±
11.1% IA/g, and 84.6 ± 14.2% IA/g, respectively) at 24 h post
injection (p.i.) resulting in tumor-to-blood ratios of âŒ176,
âŒ48, and âŒ107, respectively, whereas uptake into PC-3
flu tumors was negligible. Kidney uptake at 24 h p.i. was lowest for <sup>177</sup>Lu-PSMA-ALB-02 (10.7 ± 0.92% IA/g), while <sup>177</sup>Lu-PSMA-ALB-05 and <sup>177</sup>Lu-PSMA-ALB-07 showed higher renal
retention (23.9 ± 4.02% IA/g and 51.9 ± 6.34% IA/g, respectively). Tumor-to-background ratios calculated from values of the
area under the curve (AUC) of time-dependent biodistribution data
were in favor of <sup>177</sup>Lu-PSMA-ALB-02 (tumor-to-blood, 46;
tumor-to-kidney, 5.9) when compared to <sup>177</sup>Lu-PSMA-ALB-05
(17 and 3.7, respectively) and <sup>177</sup>Lu-PSMA-ALB-07 (39 and
2.1, respectively). The high accumulation of the radioligands in PC-3
PIP tumors was visualized on SPECT/CT images demonstrating increasing
tumor-to-kidney ratios over time. Taking all of the characteristics
into account, <sup>177</sup>Lu-PSMA-ALB-02 emerged as the most promising
candidate. The applied concept may be attractive for future clinical
translation potentially enabling more potent and convenient prostate
cancer radionuclide therapy
Preclinical Development of Novel PSMA-Targeting Radioligands: Modulation of Albumin-Binding Properties To Improve Prostate Cancer Therapy
The treatment of metastatic castration-resistant
prostate cancer
(mCRPC) remains challenging with current treatment options. The development
of more effective therapies is, therefore, urgently needed. Targeted
radionuclide therapy with prostate-specific membrane antigen (PSMA)-targeting
ligands has revealed promising clinical results. In an effort to optimize
this concept, it was the aim of this study to design and investigate
PSMA ligands comprising different types of albumin binders. PSMA-ALB-53
and PSMA-ALB-56 were designed by combining the glutamate-urea-based
PSMA-binding entity, a DOTA chelator and an albumin binder based on
the 4-(<i>p</i>-iodophenyl)-moiety or <i>p</i>-(tolyl)-moiety. The compounds were labeled with <sup>177</sup>Lu
(50 MBq/nmol) resulting in radioligands of high radiochemical purity
(â„98%). Both radioligands were stable (â„98%) over 24
h in the presence of l-ascorbic acid. The uptake into PSMA-positive
PC-3 PIP tumor cells in vitro was in the same range (54â58%)
for both radioligands; however, <sup>177</sup>Lu-PSMA-ALB-53 showed
a 15-fold enhanced binding to human plasma proteins. Biodistribution
studies performed in PC-3 PIP/flu tumor-bearing mice revealed high
tumor uptake of <sup>177</sup>Lu-PSMA-ALB-53 and <sup>177</sup>Lu-PSMA-ALB-56,
respectively, demonstrated by equal areas under the curves (AUCs)
for both radioligands. The increased retention of <sup>177</sup>Lu-PSMA-ALB-53
in the blood resulted in almost 5-fold lower tumor-to-blood AUC ratios
when compared to <sup>177</sup>Lu-PSMA-ALB-56. Kidney clearance of <sup>177</sup>Lu-PSMA-ALB-56 was faster, and hence, the tumor-to-kidney
AUC ratio was 3-fold higher than in the case of <sup>177</sup>Lu-PSMA-ALB-53.
Due to the more favorable tissue distribution profile, <sup>177</sup>Lu-PSMA-ALB-56 was selected for a preclinical therapy study in PC-3
PIP tumor-bearing mice. The tumor growth delay after application of <sup>177</sup>Lu-PSMA-ALB-56 and <sup>177</sup>Lu-PSMA-617 applied at
the same activities (2 or 5 MBq per mouse) revealed better antitumor
effects in the case of <sup>177</sup>Lu-PSMA-ALB-56. As a consequence,
the survival of mice treated with <sup>177</sup>Lu-PSMA-ALB-56 was
prolonged when compared to the mice, which received the same activity
of <sup>177</sup>Lu-PSMA-617. Our results demonstrated the superiority
of <sup>177</sup>Lu-PSMA-ALB-56 over <sup>177</sup>Lu-PSMA-ALB-53
indicating that the <i>p</i>-(tolyl)-moiety was more suited
as an albumin binder to optimize the tissue distribution profile. <sup>177</sup>Lu-PSMA-ALB-56 was more effective to treat tumors than <sup>177</sup>Lu-PSMA-617 resulting in complete tumor remission in four
out of six mice. This promising results warrant further investigations
to assess the potential for clinical application of <sup>177</sup>Lu-PSMA-ALB-56
Synthesis, Radiolabeling, and Characterization of Plasma Protein-Binding Ligands: Potential Tools for Modulation of the Pharmacokinetic Properties of (Radio)Pharmaceuticals
The
development of (radio)Âpharmaceuticals with favorable pharmacokinetic
profiles is crucial for allowing the optimization of the imaging or
therapeutic potential and the minimization of undesired side effects.
The aim of this study was, therefore, to evaluate and compare three
different plasma protein binders (PPB-01, PPB-02, and PPB-03) that
are potentially useful in combination with (radio)Âpharmaceuticals
to enhance their half-life in the blood. The entities were functionalized
with a 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA)
chelator via a l-lysine and ÎČ-alanine linker moiety
using solid-phase peptide chemistry and labeled with <sup>177</sup>Lu (<i>T</i><sub>1/2</sub> = 6.65 days), a clinically established
radiometal. The binding capacities of these radioligands and <sup>177</sup>LuâDOTA were evaluated using human plasma and solutions
of human serum albumin (HSA), human α<sub>1</sub>-acid glycoprotein
(α<sub>1</sub>-AGP), and human transthyretin (hTTR) by applying
an ultrafiltration assay. <sup>177</sup>LuâDOTAâPPB-01
and <sup>177</sup>LuâDOTAâPPB-02 bound to a high and
moderate extent to human plasma proteins (>90% and âŒ70%,
respectively),
whereas the binding to hTTR was considered negligible (<10%). <sup>177</sup>LuâDOTAâPPB-03 showed almost complete binding
to human plasma proteins (>90%) with a high fraction bound to hTTR
(âŒ50%). Plasma protein binding of the <sup>177</sup>LuâDOTA
complex, which was used as a control, was not observed (<1%). <sup>177</sup>LuâDOTAâPPB-01 and <sup>177</sup>LuâDOTAâPPB-02
were both displaced (>80%) from HSA by ibuprofen, specific for
Sudlowâs
binding site II and coherent with the aromatic structures, and >80%
by their respective binding entities. <sup>177</sup>LuâDOTAâPPB-03
was displaced from hTTR by the site-marker l-thyroxine (>60%)
and by its binding entity PPB-03* (>80%). All three radioligands
were
investigated with regard to the in vivo blood clearance in normal
mice. <sup>177</sup>LuâDOTAâPPB-01 showed the slowest
blood clearance (<i>T</i><sub>1/2,ÎČ</sub>: >15
h)
followed by <sup>177</sup>LuâDOTAâPPB-03 (<i>T</i><sub>1/2,ÎČ</sub>: âŒ2.33 h) and <sup>177</sup>LuâDOTAâPPB-02
(<i>T</i><sub>1/2,ÎČ</sub>: âŒ1.14 h), which
was excreted relatively fast. Our results confirmed the high affinity
of the 4-(4-iodophenyl)-butyric acid entity (PPB-01) to plasma proteins,
while replacement of the halogen by an ethynyl entity (PPB-02) reduced
the plasma protein binding significantly. An attractive approach is
the application of the transthyretin binder (PPB-03), which shows
high affinity to hTTR. Future studies in our laboratory will be focused
on the application of these binding entities in combination with clinically
relevant targeting agents for diagnostic and therapeutic purposes
in nuclear medicine
(S)-Selectivity in Phenylacetyl Carbinol Synthesis Using the Wild- Type Enzyme Acetoin:Dichlorophenolindophenol Oxidoreductase from Bacillus licheniformis
Thiamine diphosphate (ThDP)-dependent enzymes are well known biocatalysts for the asym- metric synthesis of a-hydroxy ketones with preferential (R)-selectivity. Pharmaceutically relevant phenyl- acetyl carbinol (PAC) has been prepared with absolute (S)-configuration only on a few occasions using enzyme variants suitably designed through rational site-directed mutagenesis approaches. Herein, we de- scribe the synthesis of (S)-phenylacetyl carbinol products with extended reaction scope employing the readily available wild-type ThDP-dependent enzyme acetoin :dichlorophenolindophenol oxidore- ductase (Ao:DCPIP OR) from Bacillus lichenifor- mis. On a semipreparative scale, cross-benzoin-like condensations of methylacetoin (donor) and differently substituted benzaldehydes proceed with almost complete chemoselectivity yielding the target (S)-1- hydroxy-1-phenylpropan-2-one derivatives with high conversion efficiencies (up to 95%) and good enan- tioselectivities (up to 99%). Ao:DCPIP OR accepts hydroxy- and nitrobenzaldehydes and also sterically demanding substrates such as 1-naphthaldehyde and 4-(tert-butyl)benzaldehyde, which are typically poor acceptors in enzymatic transformations. The explorative synthesis of (S)-phenylpropionyl carbinol medi- ated by Ao:DCPIP OR via carboligation of benzal- dehyde with 3,4-hexanedione is also reported
Binding Mode Characterization of Novel RNA Polymerase Inhibitors Using a Combined Biochemical and NMR Approach
Bacterial
RNA polymerase (RNAP) represents a validated target for the development
of broad-spectrum antibiotics. However, the medical value of RNAP
inhibitors in clinical use is limited by the prevalence of resistant
strains. To overcome this problem, we focused on the exploration of
alternative target sites within
the RNAP. Previously, we described the discovery of a novel RNAP inhibitor
class containing an ureidothiophene-2-carboxylic acid core structure.
Herein, we demonstrate that these compounds are potent against a set
of methicillin-resistant <i>Staphylococcus aureus</i> (MRSA)
strains (MIC 2â16 ÎŒg mL<sup>â1</sup>) and rifampicin-resistant <i>Escherichia coli</i> TolC strains (MIC 12.5â50 ÎŒg
mL<sup>â1</sup>). Additionally, an abortive transcription assay
revealed that these compounds inhibit the bacterial transcription
process during the initiation phase. Furthermore, the binding mode
of the ureidothiophene-2-carboxylic acids was characterized by mutagenesis
studies and ligand-based NMR spectroscopy. Competition saturation
transfer difference (STD) NMR experiments with the described RNAP
inhibitor myxopyronin A (<b>Myx</b>) suggest that the ureidothiophene-2-carboxylic
acids compete with <b>Myx</b> for the same binding site in the
RNAP switch region. INPHARMA (interligand NOE for pharmacophore mapping)
experiments and molecular docking simulations provided a binding model
in which the ureidothiophene-2-carboxylic acids occupy the region
of the <b>Myx</b> western chain binding site and slightly occlude
that of the eastern chain. These results demonstrate that the ureidothiophene-2-carboxylic
acids are a highly attractive new class of RNAP inhibitors that can
avoid the problem of resistance
Cylindrofridins AâC, Linear Cylindrocyclophane-Related Alkylresorcinols from the Cyanobacterium <i>Cylindrospermum stagnale</i>
A rapid and exhaustive one-step biomass
extraction as well as an
enrichment and cleanup procedure has been developed for HPLC-UV detection
and quantification of closely related [7.7]Âparacyclophanes and structural
derivatives based on a two-phase solvent system. The procedure has
been validated using the biomass of the carbamidocyclophane- and cylindrocyclophane-producing
cyanobacterium <i>Nostoc</i> sp. CAVN2 and was utilized
to perform a screening comprising 102 cyanobacterial strains. As a
result, three new cylindrocyclophane-related alkylresorcinols, cylindrofridins
AâC (<b>1</b>â<b>3</b>), and known cylindrocyclophanes
(<b>4</b>â<b>6</b>) were detected and isolated
from <i>Cylindrospermum stagnale</i> PCC 7417. Structures
of <b>1</b>â<b>3</b> were elucidated by a combination
of 1D and 2D NMR experiments, HRMS, and ECD spectroscopy. Cylindrofridin
A (<b>1</b>) is the first naturally occurring [7.7]Âparacyclophane-related
monomeric derivative. In contrast, cylindrofridins B (<b>2</b>) and C (<b>3</b>) represent dimers related to <b>1</b>. Due to chlorination at the alkyl carbon atom in <b>1</b>â<b>3</b>, the site of [7.7]Âparacyclophane macrocycle formation, the
cylindrofridins represent linearized congeners of the cylindrocyclophanes.
Compounds <b>1</b>â<b>3</b> were not toxic against
nontumorigenic HaCaT cells (IC<sub>50</sub> values >25 ÎŒM)
compared
to the respective cylindrocyclophanes, but <b>1</b> was the
only cylindrofridin showing moderate activity against methicillin-resistant <i>Staphylococcus aureus</i> (MRSA) and <i>Streptococcus pneumoniae</i> with MIC values of 9 and 17 ÎŒM, respectively
Discovery of Cycloalkyl[<i>c</i>]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2α Inhibitors
Hypoxia-inducible factors (HIFs) are heterodimeric transcription
factors induced in diverse pathophysiological settings. Inhibition
of HIF-2α has become a strategy for cancer treatment since the
discovery that small molecules, upon binding into a small cavity of
the HIF-2α PAS B domain, can alter its conformation and disturb
the activity of the HIF dimer complex. Herein, the design, synthesis,
and systematic SAR exploration of cycloalkyl[c]thiophenes
as novel HIF-2α inhibitors are described, providing the first
chemotype featuring an alkoxyâaryl scaffold. X-ray data confirmed
the ability of these inhibitors to induce perturbation of key amino
acids by appropriately presenting key pharmacophoric elements in the
hydrophobic cavity. Selected compounds showed inhibition of VEGF-A
secretion in cancer cells and prevention of Arg1 expression and activity
in IL4-stimulated macrophages. Moreover, in vivo target gene modulation
was demonstrated with compound 35r. Thus, the disclosed
HIF-2α inhibitors represent valuable tools for investigating
selective HIF-2α inhibition and its effect on tumor biology
Anaerobic Metabolism of 3-Hydroxybenzoate by the Denitrifying Bacterium Thauera aromatica
The anaerobic metabolism of 3-hydroxybenzoate was studied in the denitrifying bacterium Thauera aromatica. Cells grown with this substrate were adapted to grow with benzoate but not with 4-hydroxybenzoate. Vice versa, 4-hydroxybenzoate-grown cells did not utilize 3-hydroxybenzoate. The first step in 3-hydroxybenzoate metabolism is a coenzyme A (CoA) thioester formation, which is catalyzed by an inducible 3-hydroxybenzoateâCoA ligase. The enzyme was purified and characterized. Further metabolism of 3-hydroxybenzoyl-CoA by cell extract required MgATP and was coupled to the oxidation of 2 mol of reduced viologen dyes per mol of substrate added. Purification of the 3-hydroxybenzoyl-CoA reducing enzyme revealed that this activity was due to benzoyl-CoA reductase, which reduced the 3-hydroxy analogue almost as efficiently as benzoyl-CoA. The further metabolism of the alicyclic dienoyl-CoA product containing the hydroxyl substitution obviously required additional specific enzymes. Comparison of the protein pattern of 3-hydroxybenzoate-grown cells with benzoate-grown cells revealed several 3-hydroxybenzoate-induced proteins; the N-terminal amino acid sequences of four induced proteins were determined and the corresponding genes were identified and sequenced. A cluster of six adjacent genes contained the genes for substrate-induced proteins 1 to 3; this cluster may not yet be complete. Protein 1 is a short-chain alcohol dehydrogenase. Protein 2 is a member of enoyl-CoA hydratase enzymes. Protein 3 was identified as 3-hydroxybenzoateâCoA ligase. Protein 4 is another member of the enoyl-CoA hydratases. In addition, three genes coding for enzymes of ÎČ-oxidation were present. The anaerobic 3-hydroxybenzoate metabolism here obviously combines an enzyme (benzoyl-CoA reductase) and electron carrier (ferredoxin) of the general benzoyl-CoA pathway with enzymes specific for the 3-hydroxybenzoate pathway. This raises some questions concerning the regulation of both pathways