A preliminary assessment of soil sulphur contamination and vegetations the vicinity of former boreholes on the afforested post-mine site Jeziórko

The work aims to assess soil sulfur contamination degree indicating various reclamation efficiencies within microhabitats formed in the “Jeziorko” inoperative boreholes of former sulfur-mining areas which have been reclaimed to forest. Three plot categories have been initially determined in post-mining areas: category D – degraded, i.e. ineffectively reclaimed and unsuccessfully afforested plots, pine stands category (P), and birch stands (B), successfully afforestated. Afterwards, four circular plots were defined within each of the determined categories (4 replications, i.e. a total of 12 plots). For each plot, cover-abundance (according to the Braun-Blanquet scale) and dominant herbaceous vegetation species, tree species and stand density were determined. Height (Ht) and diameter at breast height (DBH) measurements were taken, and a vitality assessment was completed according to the IUFRO classification. Soil samples were collected at each plot from the plots in 5 points at two different depths (0–5 cm and 5–40 cm) and laboratory analysis were prepared. Soil  properties such as texture, pH, electrical  conductivity (EC), hydrolytic acidity (Hh), the contents of soil organic carbon SOC, total nitrogen TN, total sulfur TS, and exchangeable cations (Ca2+, Mg2+, K+, Na+) were determined. Soils from the D plot category were characterised by high sulfur contamination, excess salinity (EC), and strong acidity in top soil. These parameters indicated the completed neutralization had not been performed effectively at certain sites. Pine (P) and birch (B) stands categories showed good growth rates and soil parameters indicating the reclamation treatments  had been completed successfully.The work aims to assess the degree of soil sulphur contamination of the various abandoned reclamation efficiencies, within the microhabitats formed in the “Jeziórko” inoperative boreholes of former sulphur-mining areas. These areas have been reclaimed to the forest. Three plot categories were initially determined in the post-mining areas: category D – degraded, i.e. ineffectively reclaimed and unsuccessfully afforested plots, with low cover-abundance or complete lack of vegetation, pine stands category, category (P) - birch stands and category (B)- successfully afforested. Afterwards, four circular plots were defined within each of the determined categories (4 replications, i.e. a total of 12 plots). For each plot, cover-abundance (according to the Braun-Blanquet scale) and dominant herbaceous vegetation species, tree species and stand density were determined. Height (Ht) and diameter at breast height (DBH) measurements were taken, and a vitality assessment was completed, according to the IUFRO classification. Soil samples were collected at each plot, in 5 points, at two different depths (0–5 cm and 5–40 cm). Finally, laboratory analysis was undertaken. Soil properties such as texture, pH, electrical  conductivity (EC), hydrolytic acidity (Hh), the contents of soil organic carbon SOC, total nitrogen TN, total sulphur TS, and exchangeable cations (Ca2+, Mg2+, K+, Na+) were determined. Soils from the D plot category were characterised by high sulphur contamination, excess salinity (EC) and strong acidity in top soil. These parameters indicated that completed neutralization was not performed effectively at certain sites. Pine (P) and birch (B) stands categories showed good growth rates and soil parameters, indicating that the reclamation treatments were completed successfully

Security theory and practice: Energy security and environmental/climate protection in the second decade of the 21st century: Development trends

ZE WSTĘPU: W niniejszym tomie podjęte zostały aktualne zagadnienia związane z wybranymi aspektami bezpieczeństwa ekologicznego (w ujęciu przedmiotowym i narodowym), jak również implikacjami powiązania kwestii ochrony środowiska i klimatu z rozwojem społeczno-ekonomicznym oraz polityką i bezpieczeństwem energetycznym

A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines

<p>Abstract</p> <p>Background</p> <p>Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or 'workflow', is a well-defined protocol, with a specific structure defined by the topology of data-flow interdependencies, and a particular functionality arising from the data transformations applied at each step. In computer science, the dataflow programming (DFP) paradigm defines software systems constructed in this manner, as networks of message-passing components. Thus, bioinformatic workflows can be naturally mapped onto DFP concepts.</p> <p>Results</p> <p>To enable the flexible creation and execution of bioinformatics dataflows, we have written a modular framework for parallel pipelines in Python ('PaPy'). A PaPy workflow is created from re-usable components connected by data-pipes into a directed acyclic graph, which together define nested higher-order map functions. The successive functional transformations of input data are evaluated on flexibly pooled compute resources, either local or remote. Input items are processed in batches of adjustable size, all flowing one to tune the trade-off between parallelism and lazy-evaluation (memory consumption). An add-on module ('NuBio') facilitates the creation of bioinformatics workflows by providing domain specific data-containers (<it>e.g</it>., for biomolecular sequences, alignments, structures) and functionality (<it>e.g</it>., to parse/write standard file formats).</p> <p>Conclusions</p> <p>PaPy offers a modular framework for the creation and deployment of parallel and distributed data-processing workflows. Pipelines derive their functionality from user-written, data-coupled components, so PaPy also can be viewed as a lightweight toolkit for extensible, flow-based bioinformatics data-processing. The simplicity and flexibility of distributed PaPy pipelines may help users bridge the gap between traditional desktop/workstation and grid computing. PaPy is freely distributed as open-source Python code at <url>http://muralab.org/PaPy</url>, and includes extensive documentation and annotated usage examples.</p

Comprehensive Study of Reclaimed Soil, Plant, and Water Chemistry Relationships in Highly S-Contaminated Post Sulfur Mine Site Jeziórko (Southern Poland)

The aim of the work was a comprehensive study of the soils (pH, EC, SOC, NT, ST), surface waters (pH, EC, Ca2+ Mg2+, Na+, NO3&minus;, SO42&minus;, Cl&minus;, HCO3&minus;), and reactions of trees and herbaceous plants in the restored forest ecosystem of a former sulfur mine. Common birch and Scots pine growth reaction, vitality (according to IUFRO standards- International Union of Forest Research Organizations), nutrient supply (Na, K, P, Ca, Mg, K), and Calamagrostis epigejos (L.) Roth chemical composition (Na, K, P, Ca, Mg, K) were assayed. The chemistry dynamics (pH, EC, DOC, NT, Ca, Mg, and S at the beginning and end of the experiment) of soil leaching and the sulfur load leached from the sulfur-contaminated soil substrates were evaluated. The remediation effects of birch and pine litter were assayed in an experiment under controlled conditions. It was found that reclamation was effective in the majority of the post-mining site; however, hotspots with sulfur contamination reaching even 45,000 mg kg&minus;1, pH &lt; 2.0 and electrical conductivity (EC) of 6500 &micro;S cm&minus;1 were reported. Surface waters typically displayed elevated concentrations of sulfate ions (average 935.13 mg L&minus;1), calcium ions (up to 434 mg L&minus;1), and high EC (average 1797 &micro;S cm&minus;1), which was related both to sulfur contamination and the sludge lime that was used in neutralization. Calamagrostis epigejos was found to be a species that adapted well to the conditions of elevated soil salinity and sulfur concentration. It was observed that the application of organic matter had a significant beneficial impact on the chemistry of soil solutions, but did not show a remediation effect by increased sulfur leaching in a short-term study

The Influence of Sedimentation Ponds of the Former Soda “Solvay” Plant in Krakow on the Chemistry of the Wilga River

This paper explores how the chemistry of the Wilga River is affected by the sedimentation ponds at the former Soda “Solvay” Plant in Krakow. Despite the revitalization of the sedimentation ponds about 30 years ago, the chemistry of the samples was characterized by high EC (from 845 to 3000 µS cm−1), high concentration of Cl− (up to 800 mg L−1), Ca (up to 270 mg L−1), and SO42− (up to 115 mg L−1), and a high value for Na (up to 270 mg L−1) was noted—surface water quality standards were exceeded. The effect of high mineralization by those elements, generated in wastewater during soda waste production, were noted to have seasonal and vertical variability. We concluded that, despite the industrial shutdown and revitalization processes, the drainage of industrial water can have serious and long-term negative effects on quality of water and the Wilga River ecosystem. The Wilga River is one of the most important examples of important environmental problems in urban areas

The role of entropy and polarity in intermolecular contacts in protein crystals

Logistic regression was used to study the amino-acid composition and structure of crystal contacts in monomeric proteins. Crystal contacts are generally depleted of large flexible amino acids and enriched in small and hydrophobic residues such as Gly and Leu; additionally, larger contacts have cores depleted of polar residues

Boletín de Segovia: Número 30 - 1895 marzo 11

Copia digital. Madrid : Ministerio de Cultura. Subdirección General de Coordinación Bibliotecaria, 200

Assessment of tree vitality, biomass and morphology of Scots pine (Pinus sylvestris L.) root systems growing on reclaimed landfill waste after zinc and lead flotation

The stability of introduced stands depends not only on aboveground but also on the belowground biomass. Results from reclaimed sites often indicate good growth of the aboveground part of stands, but data on the development of root systems are still lacking. Our aim was to assess the vitality of trees, their biomass and the morphology of the root systems of Scots pine (Pinus sylvestris L.) introduced on reclaimed landfill waste after zinc and lead flotation in Bukowno (southern Poland). The landfill site was reclaimed 20 years ago and reclamation treatments involved isolation and covering with mineral substrate layers (110–150 cm thickness) which formed a technogenic soil profile. Four research plots (10 m × 10 m) were set up in pure pine stands where soil profiles consisted entirely of flotation waste. Trees on the plots were assayed according to the Kraft and IUFRO classification system. In total, 15 trees of average growth parameters and bio-sociological position (I and II Kraft class) were selected for biomass and root system analyses and the root systems were excavated, washed, measured, weighed and photographed