Fragmentation paths in dynamical models

We undertake a quantitative comparison of multi-fragmentation reactions, as modeled by two different approaches: the Antisymmetrized Molecular Dynamics (AMD) and the momentum-dependent stochastic mean-field (SMF) model. Fragment observables and pre-equilibrium (nucleon and light cluster) emission are analyzed, in connection to the underlying compression-expansion dynamics in each model. Considering reactions between neutron-rich systems, observables related to the isotopic properties of emitted particles and fragments are also discussed, as a function of the parametrization employed for the isovector part of the nuclear interaction. We find that the reaction path, particularly the mechanism of fragmentation, is different in the two models and reflects on some properties of the reaction products, including their isospin content. This should be taken into account in the study of the density dependence of the symmetry energy from such collisions.Comment: 11 pages, 13 figures, submitted to Phys. Rev.

Regulatory T cells in melanoma revisited by a computational clustering of FOXP3+ T cell subpopulations

CD4+ T cells that express the transcription factor FOXP3 (FOXP3+ T cells) are commonly regarded as immunosuppressive regulatory T cells (Treg). FOXP3+ T cells are reported to be increased in tumour-bearing patients or animals, and considered to suppress anti-tumour immunity, but the evidence is often contradictory. In addition, accumulating evidence indicates that FOXP3 is induced by antigenic stimulation, and that some non-Treg FOXP3+ T cells, especially memory-phenotype FOXP3low cells, produce proinflammatory cytokines. Accordingly, the subclassification of FOXP3+ T cells is fundamental for revealing the significance of FOXP3+ T cells in tumour immunity, but the arbitrariness and complexity of manual gating have complicated the issue. Here we report a computational method to automatically identify and classify FOXP3+ T cells into subsets using clustering algorithms. By analysing flow cytometric data of melanoma patients, the proposed method showed that the FOXP3+ subpopulation that had relatively high FOXP3, CD45RO, and CD25 expressions was increased in melanoma patients, whereas manual gating did not produce significant results on the FOXP3+ subpopulations. Interestingly, the computationally-identified FOXP3+ subpopulation included not only classical FOXP3high Treg but also memory-phenotype FOXP3low cells by manual gating. Furthermore, the proposed method successfully analysed an independent dataset, showing that the same FOXP3+ subpopulation was increased in melanoma patients, validating the method. Collectively, the proposed method successfully captured an important feature of melanoma without relying on the existing criteria of FOXP3+ T cells, revealing a hidden association between the T cell profile and melanoma, and providing new insights into FOXP3+ T cells and Treg

Comparison of dynamical multifragmentation models

Multifragmentation scenarios, as predicted by antisymmetrized molecular dynamics (AMD) or momentum-dependent stochastic mean-field (BGBD) calculations are compared. While in the BGBD case fragment emission is clearly linked to the spinodal decomposition mechanism, i.e. to mean-field instabilities, in AMD many-body correlations have a stronger impact on the fragmentation dynamics and clusters start to appear at earlier times. As a consequence, fragments are formed on shorter time scales in AMD, on about equal footing of light particle pre-equilibrium emission. Conversely, in BGBD pre-equilibrium and fragment emissions happen on different time scales and are related to different mechanisms

Geometry and Conductance of Al Wires Suspended between Semi-Infinite Crystalline Electrodes

We present a first-principles study of a coherent relationship between the optimized geometry and conductance of a three-aluminum-atom wire during its elongation process. Our simulation employs the most definite model including semi-infinite crystalline electrodes using the overbridging boundary-matching method [Phys. Rev. B {\bf 67}, 195315 (2003)] extended to incorporate nonlocal pseudopotentials. The results that the conductance of the wire is $\sim$ 1 G$_0$ and the conductance trace as a function of electrode spacing shows a convex downward curve before breaking are in agreement with experimental data.Comment: 5 pages and 3 figure

Dynamics of an Acoustic Polaron in One-Dimensional Electron-Lattice System

The dynamical behavior of an acoustic polaron in typical non-degenerate conjugated polymer, polydiacetylene, is numerically studied by using Su-Schrieffer-Heeger's model for the one dimensional electron-lattice system. It is confirmed that the velocity of a polaron accelerated by a constant electric field shows a saturation to a velocity close to the sound velocity of the system, and that the width of a moving polaron decreases as a monotonic function of the velocity tending to zero at the saturation velocity. The effective mass of a polaron is estimated to be about one hundred times as heavy as the bare electron mass. Furthermore the linear mode analysis in the presence of a polaron is carried out, leading to the conclusion that there is only one localized mode, i.e. the translational mode. This is confirmed also from the phase shift of extended modes. There is no localized mode corresponding to the amplitude mode in the case of the soliton in polyacetylene. Nevertheless the width of a moving polaron shows small oscillations in time. This is found to be related to the lowest odd symmetry extended mode and to be due to the finite size effect.Comment: 12 pages, latex, 9 figures (postscript figures abailble on request to [email protected]) to be published in J. Phys. Soc. Jpn. vol.65 (1996) No.

Compatibility of localized wave packets and unrestricted single particle dynamics for cluster formation in nuclear collisions

Antisymmetrized molecular dynamics with quantum branching is generalized so as to allow finite time duration of the unrestricted coherent mean field propagation which is followed by the decoherence into wave packets. In this new model, the wave packet shrinking by the mean field propagation is respected as well as the diffusion, so that it predicts a one-body dynamics similar to that in mean field models. The shrinking effect is expected to change the diffusion property of nucleons in nuclear matter and the global one-body dynamics. The central \xenon+\tin collisions at 50 MeV/nucleon are calculated by the models with and without shrinking, and it is shown that the inclusion of the wave packet shrinking has a large effect on the multifragmentation in a big expanding system with a moderate expansion velocity.Comment: 16 pages, 7 figure

First-Principles Study on Leakage Current through Si/SiO2_2 Interface

The relationship between the presence of defects at the stacking structure of the Si/SiO$_2$ interface and leakage current is theoretically studied by first-principles calculation. I found that the leakage current through the interface with dangling bonds is 530 times larger than that without any defects, which is expected to lead to dielectric breakdown. The direction of the dangling bonds is closely related to the performance of the oxide as an insulator. In addition, it is proved that the termination of the dangling bonds by hydrogen atoms is effective for reducing the leakage current.Comment: 11 pages. to be published in Phys. Rev.

Spin Polarization and Magneto-Coulomb Oscillations in Ferromagnetic Single Electron Devices

The magneto-Coulomb oscillation, the single electron repopulation induced by external magnetic field, observed in a ferromagnetic single electron transistor is further examined in various ferromagnetic single electron devices. In case of double- and triple-junction devices made of Ni and Co electrodes, the single electron repopulation always occurs from Ni to Co electrodes with increasing a magnetic field, irrespective of the configurations of the electrodes. The period of the magneto-Coulomb oscillation is proportional to the single electron charging energy. All these features are consistently explained by the mechanism that the Zeeman effect induces changes of the Fermi energy of the ferromagnetic metal having a non-zero spin polarizations. Experimentally determined spin polarizations are negative for both Ni and Co and the magnitude is larger for Ni than Co as expected from band calculations.Comment: 4 pages, 3 figures, uses jpsj.sty, submitted to J. Phys. Soc. Jp

Semi-Phenomenological Analysis of Dynamics of Nonlinear Excitations in One-Dimensional Electron-Phonon System

The structure of moving nonlinear excitations in one-dimensional electron-phonon systems is studied semi-phenomenologically by using an effective action in which the width of the nonlinear excitation is treated as a dynamical variable. The effective action can be derived from Su, Schrieffer and Heeger's model or its continuum version proposed by Takayama, Lin-Liu and Maki with an assumption that the nonlinear excitation moves uniformly without any deformation except the change of its width. The form of the action is essentially the same as that discussed by Bishop and coworkers in studying the dynamics of the soliton in polyacetylene, though some details are different. For the moving excitation with a velocity $v$, the width is determined by minimizing the effective action. A requirement that there must be a minimum in the action as a function of its width provides a maximum velocity. The velocity dependence of the width and energy can be determined. The motions of a soliton in p olyacetylene and an acoustic polaron in polydiacetylene are studied within this formulation. The obtained results are in good agreement with those of numerical simulations.Comment: 19 pages, LaTeX, 7 Postscript figures, to be published in J. Phys. Soc. Jpn. vol.65 (1996) No.

Nonequilibrium spin distribution in single-electron transistor

Single-electron transistor with ferromagnetic outer electrodes and nonmagnetic island is studied theoretically. Nonequilibrium electron spin distribution in the island is caused by tunneling current. The dependencies of the magnetoresistance ratio $\delta$ on the bias and gate voltages show the dips which are directly related to the induced separation of Fermi levels for electrons with different spins. Inside a dip $\delta$ can become negative.Comment: 11 pages, 2 eps figure