13,251 research outputs found
Empirical Research Plan: Effects of Sketching on Program Comprehension
Sketching is an important means of communication in software engineering
practice. Yet, there is little research investigating the use of sketches. We
want to contribute a better understanding of sketching, in particular its use
during program comprehension. We propose a controlled experiment to investigate
the effectiveness and efficiency of program comprehension with the support of
sketches as well as what sketches are used in what way.Comment: 5 pages, 0 figures, Proc. International Conference on Agile Software
Development (XP'16). Volume 251 of the book series Lecture Notes in Business
Information Processing (LNBIP). Springer, 201
Atomic data from the IRON project - LI. Electron impact excitation of FeIX
We calculate collision strengths and thermally averaged collision strengths for electron excitation between the one hundred and forty energetically lowest levels of Fe8+. The scattering target is more elaborate than in any earlier work and large increases are found in the excitation rates among the levels of the 3s(2)3p(5)3d electron configuration due to resonance series that have not been considered previously. The implications for solar and stellar spectroscopy have been discussed elsewhere (Storey & Zeippen 2001). We correct some errors that were made in generating the figures given in that paper and present corrected versions
Multiple locus linkage analysis of genomewide expression in yeast.
With the ability to measure thousands of related phenotypes from a single biological sample, it is now feasible to genetically dissect systems-level biological phenomena. The genetics of transcriptional regulation and protein abundance are likely to be complex, meaning that genetic variation at multiple loci will influence these phenotypes. Several recent studies have investigated the role of genetic variation in transcription by applying traditional linkage analysis methods to genomewide expression data, where each gene expression level was treated as a quantitative trait and analyzed separately from one another. Here, we develop a new, computationally efficient method for simultaneously mapping multiple gene expression quantitative trait loci that directly uses all of the available data. Information shared across gene expression traits is captured in a way that makes minimal assumptions about the statistical properties of the data. The method produces easy-to-interpret measures of statistical significance for both individual loci and the overall joint significance of multiple loci selected for a given expression trait. We apply the new method to a cross between two strains of the budding yeast Saccharomyces cerevisiae, and estimate that at least 37% of all gene expression traits show two simultaneous linkages, where we have allowed for epistatic interactions. Pairs of jointly linking quantitative trait loci are identified with high confidence for 170 gene expression traits, where it is expected that both loci are true positives for at least 153 traits. In addition, we are able to show that epistatic interactions contribute to gene expression variation for at least 14% of all traits. We compare the proposed approach to an exhaustive two-dimensional scan over all pairs of loci. Surprisingly, we demonstrate that an exhaustive two-dimensional scan is less powerful than the sequential search used here. In addition, we show that a two-dimensional scan does not truly allow one to test for simultaneous linkage, and the statistical significance measured from this existing method cannot be interpreted among many traits
Three-Dimensional Ionisation, Dust RT and Chemical Modelling of Planetary Nebulae
The assumption of spherical symmetry is not justified for the vast majority
of PNe. The interpretation of spatially-resolved observations cannot rely
solely on the application of 1D codes, which may yield incorrect abundances
determinations resulting in misleading conclusions. The 3D photoionisation code
MOCASSIN (Monte CAarlo SimulationS of ionised Nebulae) is designed to remedy
these shortcomings. The 3D transfer of both primary and secondary radiation is
treated self-consistently without the need of approximations. The code was
benchmarked and has been applied to the study of several PNe. The current
version includes a fully self-consistent radiative transfer treatment for dust
grains mixed within the gas, taking into account the microphysics of dust-gas
interactions within the geometry-independent Monte Carlo transfer. The new code
provides an excellent tool for the self-consistent analysis of dusty ionised
regions showing asymmetries and/or density and chemical inhomogeneities. Work
is currently in progress to incorporate the processes that dominate the thermal
balance of photo-dissociation regions (PDRs), as well as the formation and
destruction processes for all the main molecular species.Comment: 3 pages, to appear in Proc. IAU Symp. 234, Planetary Nebulae in Our
Galaxy and Beyond (3-7 Apr 2006), eds. M.J. Barlow & R.H. Mendez (Cambridge
Univ. Press
Tau-aggregation inhibitor therapy for Alzheimer's disease
Article Accepted Date: 9 December 2013 Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.Peer reviewedPublisher PD
Electron pockets and pseudogap asymmetry observed in the thermopower of underdoped cuprates
We calculate the diffusion thermoelectric power of high-Tc cuprates using the
resonating-valence-bond spin-liquid model developed by Yang, Rice and Zhang
(YRZ). In this model, reconstruction of the energy-momentum dispersion results
in a pseudogap in the density of states that is heavily asymmetric about the
Fermi level. The subsequent asymmetry in the spectral conductivity is found to
account for the large magnitude and temperature dependence of the thermopower
observed in underdoped cuprates. In addition we find evidence in experimental
data for electron pockets in the Fermi surface, arising from a YRZ-like
reconstruction, near the onset of the pseudogap in the slightly overdoped
regime.Comment: 6 pages, 7 figures, accepted for publication in EP
Particle simulation of plasmas on the massively parallel processor
Particle simulations, in which collective phenomena in plasmas are studied by following the self consistent motions of many discrete particles, involve several highly repetitive sets of calculations that are readily adaptable to SIMD parallel processing. A fully electromagnetic, relativistic plasma simulation for the massively parallel processor is described. The particle motions are followed in 2 1/2 dimensions on a 128 x 128 grid, with periodic boundary conditions. The two dimensional simulation space is mapped directly onto the processor network; a Fast Fourier Transform is used to solve the field equations. Particle data are stored according to an Eulerian scheme, i.e., the information associated with each particle is moved from one local memory to another as the particle moves across the spatial grid. The method is applied to the study of the nonlinear development of the whistler instability in a magnetospheric plasma model, with an anisotropic electron temperature. The wave distribution function is included as a new diagnostic to allow simulation results to be compared with satellite observations
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