Starve to Sustain - An Ancient Syrian Landrace of Sorghum as Tool for Phosphorous Bio-Economy?

Phosphorus (P) is an essential macronutrient, playing a role in developmental and metabolic processes in plants. To understand the local and systemic responses of sorghum to inorganic phosphorus (Pi) starvation and the potential of straw and ash for reutilisation in agriculture, we compared two grain (Razinieh) and sweet (Della) sorghum varieties with respect to their morpho-physiological and molecular responses. We found that Pi starvation increased the elongation of primary roots, the formation of lateral roots, and the accumulation of anthocyanin. In Razinieh, lateral roots were promoted to a higher extent, correlated with a higher expression of SbPht1 phosphate transporters. Infrared spectra of straw from mature plants raised to maturity showed two prominent bands at 1371 and 2337 cm−1, which could be assigned to P-H(H2) stretching vibration in phosphine acid and phosphinothious acid, and their derivates, whose abundance correlated with phosphate uptake of the source plant and genotype (with a higher intensity in Razinieh). The ash generated from these straws stimulated the shoot elongation and root development of the rice seedlings, especially for the material derived from Razinieh raised under Pi starvation. In conclusion, sorghum growing on marginal lands has potential as a bio-economy alternative for mineral phosphorus recycling

The shape of ecological networks

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly through successful adaptations and speciations. We treat them as quenched random variables. These interactions determine long-term topological features of the species network, which are found to agree with those of biological systems.Comment: 4 pages, 2 figure

A comparison of taxon co-occurrence patterns for macro- and microorganisms

We examine co-occurrence patterns of microorganisms to evaluate community assembly “rules.” We use methods previously applied to macroorganisms, both to evaluate their applicability to microorganisms and to allow comparison of co-occurrence patterns observed in microorganisms to those found in macroorganisms. We use a null model analysis of 124 incidence matrices from microbial communities, including bacteria, archaea, fungi, and algae, and we compare these results to previously published findings from a meta-analysis of almost 100 macroorganism data sets. We show that assemblages of microorganisms demonstrate nonrandom patterns of co-occurrence that are broadly similar to those found in assemblages of macroorganisms. These results suggest that some taxon co-occurrence patterns may be general characteristics of communities of organisms from all domains of life. We also find that co-occurrence in microbial communities does not vary among taxonomic groups or habitat types. However, we find that the degree of co-occurrence does vary among studies that use different methods to survey microbial communities. Finally, we discuss the potential effects of the undersampling of microbial communities on our results, as well as processes that may contribute to nonrandom patterns of co-occurrence in both macrobial and microbial communities such as competition, habitat filtering, historical effects, and neutral processes

An Erythropoietin-Independent Mechanism of Erythrocytic Precursor Proliferation Underlies Hypoxia Tolerance in Sea Nomads

The Bajau Sea Nomads were recently demonstrated to have evolved larger spleens as an adaptation to millennia of a marine foraging lifestyle. The large-spleen phenotype appears to derive from increases in thyroid hormone (TH) production as a result of reduced expression of phosphodiesterase 10A (PDE10A), though the exact mechanism remains unknown. Through pharmacological inhibition of PDE10A using the selective inhibitor MP-10 in mice, we were able to mimic the Bajau adaptation and show that treated mice had significantly larger spleens than control animals. This difference appears connected to an excess of early stage erythrocytes and an apparent increase in red blood cell (RBC) precursor proliferation in response to increased TH. However, we determined that the stimulation of RBC production in the mouse model via TH is Erythropoietin (EPO)-independent, unlike in the altitude (chronic hypoxemia) response. We confirmed this using human GWAS data; although the Bajau PDE10A variants are significantly associated with increased TH levels and RBC count, they are not associated with EPO levels, nor are other strongly thyroid-associated SNPs. We therefore suggest that an EPO-independent mechanism of stimulating RBC precursor proliferation via TH upregulation underlies the increase in spleen size observed in Sea Nomad populations

Spatial representation of temporal information through spike timing dependent plasticity

We suggest a mechanism based on spike time dependent plasticity (STDP) of synapses to store, retrieve and predict temporal sequences. The mechanism is demonstrated in a model system of simplified integrate-and-fire type neurons densely connected by STDP synapses. All synapses are modified according to the so-called normal STDP rule observed in various real biological synapses. After conditioning through repeated input of a limited number of of temporal sequences the system is able to complete the temporal sequence upon receiving the input of a fraction of them. This is an example of effective unsupervised learning in an biologically realistic system. We investigate the dependence of learning success on entrainment time, system size and presence of noise. Possible applications include learning of motor sequences, recognition and prediction of temporal sensory information in the visual as well as the auditory system and late processing in the olfactory system of insects.Comment: 13 pages, 14 figures, completely revised and augmented versio

Spatial Dynamics and Ecosystem Functioning

Ecosystem functioning is dependent upon the way species become distributed across space

Hemispheric asymmetry of endogenous neural oscillations in young children: implications for hearing speech in noise

Speech signals contain information in hierarchical time scales, ranging from short-duration (e.g., phonemes) to long-duration cues (e.g., syllables, prosody). A theoretical framework to understand how the brain processes this hierarchy suggests that hemispheric lateralization enables specialized tracking of acoustic cues at different time scales, with the left and right hemispheres sampling at short (25 ms; 40 Hz) and long (200 ms; 5 Hz) periods, respectively. In adults, both speech-evoked and endogenous cortical rhythms are asymmetrical: low-frequency rhythms predominate in right auditory cortex, and high-frequency rhythms in left auditory cortex. It is unknown, however, whether endogenous resting state oscillations are similarly lateralized in children. We investigated cortical oscillations in children (3–5 years; N = 65) at rest and tested our hypotheses that this temporal asymmetry is evident early in life and facilitates recognition of speech in noise. We found a systematic pattern of increasing leftward asymmetry for higher frequency oscillations; this pattern was more pronounced in children who better perceived words in noise. The observed connection between left-biased cortical oscillations in phoneme-relevant frequencies and speech-in-noise perception suggests hemispheric specialization of endogenous oscillatory activity may support speech processing in challenging listening environments, and that this infrastructure is present during early childhood

Metacommunities, metaecosystems and the environmental fate of chemical contaminants

Although pollution is a major driver of ecosystem change, models predicting the environmental fate of contaminants suffer from critical uncertainties related to oversimplifying the dynamics of the biological compartment.It is increasingly recognized that contaminant processing is an outcome of ecosystem functioning, that ecosystem functioning is contingent on community structure and that community structure is influenced by organismal dispersal. We propose a conceptual organization of the contribution of organismal dispersal to local contaminant fate. Direct dispersal effects occur when the dispersing organism directly couples contaminant stocks in spatially separate ecosystems by transporting contaminants in its biomass. Indirect dispersal effects occur when the dispersing organism indirectly influences contaminant fate via community assembly. This can occur either when the dispersing organism is a contaminant processor or when the dispersing organism alters, via species interactions, the abundance of contaminant biotransporters or processors already established in the ecosystem. The magnitude of direct and indirect dispersal effects is modulated by many factors, including other contaminants. These will influence population growth rates of the dispersing species in the donor ecosystem, or the probability that a dispersing individual reaches the recipient ecosystem.We provide a review of pertinent literature demonstrating that these two mechanisms, and their chemical modulation, are well supported or likely to occur in many natural and human‐modified landscapes. The literature also demonstrates that they can operate in concert with each other.Synthesis and applications. Managed ecosystems thought to be important contaminant and nutrient sinks, such as artificial ponds and constructed wetlands, should be monitored and controlled for in‐and‐out animal movement if contaminant export is found to be relevant. Uncontaminated fishing grounds linked to contaminated sites via movement of dispersing species should be monitored and resident species evaluated for health consumption advisories. Assessing the success of contaminated site remediation can be improved by better matching the spatial extent of site remediation and the home range of monitored species. Finally, interagency research fund programmes should be developed that narrow the current gap between the fields of ecology and ecotoxicology.Managed ecosystems thought to be important contaminant and nutrient sinks, such as artificial ponds and constructed wetlands, should be monitored and controlled for in‐and‐out animal movement if contaminant export is found to be relevant. Uncontaminated fishing grounds linked to contaminated sites via movement of dispersing species should be monitored and resident species evaluated for health consumption advisories. Assessing the success of contaminated site remediation can be improved by better matching the spatial extent of site remediation and the home range of monitored species. Finally, interagency research fund programmes should be developed that narrow the current gap between the fields of ecology and ecotoxicology.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/143615/1/jpe13054.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/143615/2/jpe13054_am.pd