1,105 research outputs found

    How does torsional rigidity affect the wrapping transition of a semiflexible chain around a spherical core?

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    We investigated the effect of torsional rigidity of a semiflexible chain on the wrapping transition around a spherical core, as a model of nucleosome, the fundamental unit of chromatin. Through molecular dynamics simulation, we show that the torsional effect has a crucial effect on the chain wrapping around the core under the topological constraints. In particular, the torsional stress (i) induces the wrapping/unwrapping transition, and (ii) leads to a unique complex structure with an antagonistic wrapping direction which never appears without the topological constraints. We further examine the effect of the stretching stress for the nucleosome model, in relation to the unique characteristic effect of the torsional stress on the manner of wrapping

    Ring polymers in melts and solutions: scaling and crossover

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    We propose a simple mean-field theory for the structure of ring polymer melts. By combining the notion of topological volume fraction and a classical van der Waals theory of fluids, we take into account many body effects of topological origin in dense systems. We predict that although the compact statistics with the Flory exponent ν=1/3\nu=1/3 is realized for very long chains, most practical cases fall into the crossover regime with the apparent exponent ν=2/5\nu = 2/5 during which the system evolves toward a topological dense-packed limit.Comment: 4 pages, 3 figure

    Length-dependent translocation of polymers through nanochannels

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    We consider the flow-driven translocation of single polymer chains through nanochannels. Using analytical calculations based on the de Gennes blob model and mesoscopic numerical simulations, we estimate the threshold flux for the translocation of chains of different number of monomers. The translocation of the chains is controlled by the competition between entropic and hydrodynamic effects, which set a critical penetration length for the chain before it can translocate through the channel. We demonstrate that the polymers show two different translocation regimes depending on how their length under confinement compares to the critical penetration length. For polymer chains longer than the threshold, the translocation process is insensitive to the number of monomers in the chain as predicted in Sakaue {\it et al.}, {\it Euro. Phys. Lett.}, {\bf 72} 83 (2005). However, for chains shorter than the critical length we show that the translocation process is strongly dependent on the length of the chain. We discuss the possible relevance of our results to biological transport.Comment: To appear in Soft Matter. 10 pages 9 Figure

    Maxwell stress in fluid mixtures

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    We examine the structure of Maxwell stress in binary fluid mixtures under an external electric field and discuss its consequence. In particular, we show that, in immiscible blends, it is intimately related to the statistics of domain structure. This leads to a compact formula, which may be useful in the investigation of electro-rheological effects in such systems. The stress tensor calculated in a phase separated fluid under a steady electric field is in a good agreement with recent experiments.Comment: 5 page

    Feedback-free optical cavity with self-resonating mechanism

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    We demonstrated the operation of a high finesse optical cavity without utilizing an active feedback system to stabilize the resonance. The effective finesse, which is a finesse including the overall system performance, of the cavity was measured to be 394,000±10,000394,000 \pm 10,000, and the laser power stored in the cavity was 2.52±0.132.52 \pm 0.13 kW, which is approximately 187,000 times greater than the incident power to the cavity. The stored power was stabilized with a fluctuation of 1.7%1.7 \%, and we confirmed continuous cavity operation for more than two hours. This result has the potential to trigger an innovative evolution for applications that use optical resonant cavities such as compact photon sources with laser-Compton scattering or cavity enhanced absorption spectroscopy.Comment: 5 pages, 7 figure
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