Parameterized complexity of the MINCCA problem on graphs of bounded decomposability

In an edge-colored graph, the cost incurred at a vertex on a path when two incident edges with different colors are traversed is called reload or changeover cost. The "Minimum Changeover Cost Arborescence" (MINCCA) problem consists in finding an arborescence with a given root vertex such that the total changeover cost of the internal vertices is minimized. It has been recently proved by G\"oz\"upek et al. [TCS 2016] that the problem is FPT when parameterized by the treewidth and the maximum degree of the input graph. In this article we present the following results for the MINCCA problem: - the problem is W[1]-hard parameterized by the treedepth of the input graph, even on graphs of average degree at most 8. In particular, it is W[1]-hard parameterized by the treewidth of the input graph, which answers the main open problem of G\"oz\"upek et al. [TCS 2016]; - it is W[1]-hard on multigraphs parameterized by the tree-cutwidth of the input multigraph; - it is FPT parameterized by the star tree-cutwidth of the input graph, which is a slightly restricted version of tree-cutwidth. This result strictly generalizes the FPT result given in G\"oz\"upek et al. [TCS 2016]; - it remains NP-hard on planar graphs even when restricted to instances with at most 6 colors and 0/1 symmetric costs, or when restricted to instances with at most 8 colors, maximum degree bounded by 4, and 0/1 symmetric costs.Comment: 25 pages, 11 figure

Law, human capital, and the emergence of free city-states in medieval Italy

In this paper, we study how the birth of the first universities in Italy affected the emergence of the Italian free cities-states (the commune) in the period 1000-1300 a.d. Exploiting a panel dataset of 121 cities, we show that after the foundation of a new university the distance between each city in the sample and the university negatively predicts the timing of the birth of communal institutions in the city. Our evidence is consistent with the idea that universities in the Middle Ages provided the necessary juridical knowledge and skills to build legal capacity and develop broader-based institutions.This paper considers how the foundation of the first universities in Italy affected the emergence of free city-states (the communes) in the period 1000-1300 CE. Exploiting a panel dataset of 121 cities, we show that the time variant distance of the sample cities to their closest university is inversely correlated with the probability of their transition to communal institutions. Our evidence is consistent with the hypothesis that the medieval universities provided the useful juridical knowledge and skills for building legal capacity and developing communal institutions

Mechanistic understanding of dendritic cell activation in skin sensitization: additional evidences to support potency classification

Allergic contact dermatitis (ACD) is an important occupational and environmental disease caused by topical exposure to chemical allergens. In the EU, it has been calculated that 4 % of animals are used in toxicity test for the assessment of skin sensitization (Peiser et al., 2012). To come a complete replacement of animals, evaluation of relative skin sensitization potency is necessary. The identification of mechanisms influencing allergen potency requires a better understanding of molecular events that trigger cell activation. Therefore, (i) the effects of selected allergens on surface markers expression and cytokines release in contact allergen-induced cell activation were assessed, and (ii) the role of Protein Kinase C (PKC) beta activation in contact allergen-induced cell activation was investigated. The human pro-myelocytic cell line THP-1 was used as experimental model surrogate of dendritic cells. Cells were exposed to select contact allergens of different potency and cell surface marker expression (CD80, CD86, HLA-DR) was determined by flow cytometry analysis. Cytokines production (IL-6, IL-8, IL-10, IL-12p40, IL-18) was evaluated with specific sandwich ELISA. The effective contribution of PKC beta in chemical allergen-induced cell activation was assessed by Western Blot analysis (PKC beta activation) and using a specific PKC beta inhibitor (PKC beta pseudosubstrate). In addition, to investigate if contact allergens are able to induce indeed dendritic cells (DCs) maturation, THP-1 cells were differentiated to immature DC and then exposed to contact allergen of different potency. Overall, our finding provides insights into the process of sensitization and strength of cell activation associated with allergens of different potency. Results obtained suggest that contact allergens of different potency are able to induce a different degree of activation of dendritic cells maturation involved in the process of ACD

Numerical investigation of non-linear inverse Compton scattering in double-layer targets

Non-linear inverse Compton scattering (NICS) is of significance in laser-plasma physics and for application-relevant laser-driven photon sources. Given this interest, we investigated this synchrotron-like photon emission in a promising configuration achieved when an ultra-intense laser pulse interacts with a double-layer target (DLT). Numerical simulations with two-dimensional particle-in-cell codes and analytical estimates are used for this purpose. The properties of NICS are shown to be governed by the processes characterizing laser interaction with the near-critical and solid layers composing the DLT. In particular, electron acceleration, laser focusing in the low-density layer, and pulse reflection on the solid layer determine the radiated power, the emitted spectrum, and the angular properties of emitted photons. Analytical estimates, supported by simulations, show that quantum effects are relevant at laser intensities as small as similar to 1 0 21 W/cm(2) Target and laser parameters affect the NICS competition with bremsstrahlung and the conversion efficiency and average energy of emitted photons. Therefore, DLT properties could be exploited to tune and enhance photon emission in experiments and future applications

VvMYB60 expression is restricted to guard cells and correlates with stomatal conductance in the grape leaf

Grapevine (Vitis vinifera L.) is traditionally grown under non-irrigated field conditions in many cropping environments, including dry lands and semiarid regions. Good osmotic adjustment, architecture of the root system, xylem embolism and efficient stomatal control of water loss account for the drought resistance traits of the Vitis genus. Among these features, the regulation of stomatal activity is of particular relevance, as it directly shapes the isohydric versus anysohydric behaviour of different grape species and cultivars. Increasing evidence indicates a role for the transcriptional control of gene expression in modulating stomatal responses to both biotic and abiotic stimuli. R2R3 MYB transcription factors have been identified as key regulators of stomatal opening and transpirational water loss under stress in different plant species. We identified the grape gene VvMYB60 (VIT_08s0056g00800) as the functional ortholog of AtMYB60 (At1g08810), involved in the regulation of stomatal activity in Arabidopsis. Here, we report results from the analysis of VvMYB60 expression in the grape leaf, including: 1. The qPCR analyses of stomata-enriched grape epidermal fragments and lasermicrodissected guard cells; 2. The confocal analysis of grape leaves agro-infiltrated with the VvMYB60promoter::GFP construct; 3. The analysis of changes in VvMYB60 expression relatively to variations in stomatal conductance (gs) in plants grown under control or drought stress conditions. As a whole our data confirmed the guard cell-specificity of VvMYB60 expression in the grape leaf and revealed a positive correlation between gs and the relative abundance of the VvMYB60 transcripts, thus substantiating the notion of VvMYB60 being a transcriptional mediator of stomatal activity in grape

The Dually Acylated NH2-terminal Domain of Gi1α Is Sufficient to Target a Green Fluorescent Protein Reporter to Caveolin-enriched Plasma Membrane Domains: PALMITOYLATION OF CAVEOLIN-1 IS REQUIRED FOR THE RECOGNITION OF DUALLY ACYLATED G-PROTEIN α SUBUNITS IN VIVO

Here we investigate the molecular mechanisms that govern the targeting of G-protein α subunits to the plasma membrane. For this purpose, we used Gi1α as a model dually acylated G-protein. We fused full-length Gi1α or its extreme NH2-terminal domain (residues 1–32 or 1–122) to green fluorescent protein (GFP) and analyzed the subcellular localization of these fusion proteins. We show that the first 32 amino acids of Gi1α are sufficient to target GFP to caveolin-enriched domains of the plasma membrane in vivo, as demonstrated by co-fractionation and co-immunoprecipitation with caveolin-1. Interestingly, when dual acylation of this 32-amino acid domain was blocked by specific point mutations (G2A or C3S), the resulting GFP fusion proteins were localized to the cytoplasm and excluded from caveolin-rich regions. The myristoylated but nonpalmitoylated (C3S) chimera only partially partitioned into caveolin-containing fractions. However, both nonacylated GFP fusions (G2A and C3S) no longer co-immunoprecipitated with caveolin-1. Taken together, these results indicate that lipid modification of the NH2-terminal of Gi1α is essential for targeting to its correct destination and interaction with caveolin-1. Also, a caveolin-1 mutant lacking all three palmitoylation sites (C133S, C143S, and C156S) was unable to co-immunoprecipitate these dually acylated GFP-G-protein fusions. Thus, dual acylation of the NH2-terminal domain of Gi1α and palmitoylation of caveolin-1 are both required to stabilize and perhaps regulate this reciprocal interaction at the plasma membrane in vivo. Our results provide the first demonstration of a functional role for caveolin-1 palmitoylation in its interaction with signaling molecules

The Parameterized Complexity of Domination-type Problems and Application to Linear Codes

We study the parameterized complexity of domination-type problems. (sigma,rho)-domination is a general and unifying framework introduced by Telle: a set D of vertices of a graph G is (sigma,rho)-dominating if for any v in D, |N(v)\cap D| in sigma and for any $v\notin D, |N(v)\cap D| in rho. We mainly show that for any sigma and rho the problem of (sigma,rho)-domination is W[2] when parameterized by the size of the dominating set. This general statement is optimal in the sense that several particular instances of (sigma,rho)-domination are W[2]-complete (e.g. Dominating Set). We also prove that (sigma,rho)-domination is W[2] for the dual parameterization, i.e. when parameterized by the size of the dominated set. We extend this result to a class of domination-type problems which do not fall into the (sigma,rho)-domination framework, including Connected Dominating Set. We also consider problems of coding theory which are related to domination-type problems with parity constraints. In particular, we prove that the problem of the minimal distance of a linear code over Fq is W[2] for both standard and dual parameterizations, and W[1]-hard for the dual parameterization. To prove W[2]-membership of the domination-type problems we extend the Turing-way to parameterized complexity by introducing a new kind of non deterministic Turing machine with the ability to perform `blind' transitions, i.e. transitions which do not depend on the content of the tapes. We prove that the corresponding problem Short Blind Multi-Tape Non-Deterministic Turing Machine is W[2]-complete. We believe that this new machine can be used to prove W[2]-membership of other problems, not necessarily related to dominationComment: 19 pages, 2 figure