10 research outputs found
A landscape of change: curatorships breathe new life into historic properties
Supplementary methods (text S1), tables s1-s11, figures s1-s
8citiesSummary_gen div_2017.12.23
Gene diversity statistics used in population genetic analyses. R file is "R_8citiesSummary_gen div_2017.12.24
R_20_cities_cyano_poplevel2017.12.23
R file of all analyses done on population level stats of cyanogenesis. The R file also contains scripts performed on city_meanvals data (city mean values
8cities16loci_pop_id_separators
Allele calls at 16 microwatt loci for each individual used in DAPC analyses. Note the labels for the rows is in the file pops_genind_2018.1.2
R_8citiesSummary_gen div_2017.12.24
R file used for genetic diversity analyses based on microsatt
R script for redundancy analyses
These scripts were used to test for isolation by distance and the effect of urbanization on genetic differentiation while controlling for IBD. There are a lot of individual files that go into these analyses. Available upon request to Marc Johnson ([email protected])
city_meanvals_2017.12.24
Mean values per city used in analyses. Intercept and slope refer to OLS regressions of cyanogenesis VS standardized distanc
Frequency of cyanogenesis within populations across 20 cities
Frequency of cyanogenesis within populations across 20 citie
pops_genind_2018.1.27
Individual levels labels formatted for hierarchical subsetting of dat
Table s7 for Johnson et al RSPB-2018-1019.pdf from Contrasting the effects of natural selection, genetic drift and gene flow on urban evolution in white clover (<i>Trifolium repens</i>)
Estimates of pairwise Fst between populations and their statistical significance in eight citie