30 research outputs found
Assessment of the potential effect of some streams properties on the isolated Aeromonas hydrophila strains susceptibility against some β-Lactams and Sulfamids
The isolation and characterization of A. hydrophila strains were carried out a given stream located in the equatorial zone in Cameroon (Central Africa), during the mild rainy season and the mild dry season. The water physicochemical parameters measured were temperature, pH, electrical conductivity, color, turbidity and suspended solids. It has been noted that bacterial abundances as well as the values of physicochemical parameters undergoes temporal variations. Antimicrobial susceptibility tests showed that the means diameters of inhibition with Oxacillin, Ceftriazone, Penicellin, Sulfamethoxazol-trimethoprim, Chloramphenicol, Imipenem, Amoxicillin-Clavulanic acid and Cefazolin were 6.44, 21, 6.63, 9.58, 15.37, 22.18, 14.29 and 10.26 mm respectively. 100% of strains tested were resistant to Penicillin, 89.47 % resistant to Oxacillin, 68.42% resistant to Sulphamethoxazole-trimetroprim and 63.15% were resistant to Cefazolin. There were 54.60% cases of antibiotic resistance, 24.34 % of intermediate sensitivity and 21.05% of sensitive strains against the tested antibiotics. The encoded redundancy analysis indicates that the percentage of the variation explained on the canonical axes is of 47.8% for the F1 axis and 25.9% for the F2 axis, for an accumulated percentage of 73.7%. The suspended solids, the Ceftriazon and Chloramphenicol are correlated to the F1 axis in positive coordinates, and the Temperature and Amoxicillin-Clavulanic acid in negative coordinates. The correlation test between the water physicochemical characteristics and the inhibition diameters of antibiotics showed some significant correlations (P<0.05). The regulation of bacterial genes would be regulated by complex mechanisms. Although many factors implied are linked to the bacterial cell, others may belong to the closed environment
DFT study of pressure induced phase transitions in LiYF4
An investigation of the pressure induced phase transition from the scheelite
phase (I41/a, Z=4) to the fergusonite-like phase (I2/a, Z=4)/LaTaO(P21/c, Z=4)
of LiYF4 is presented. Employing density functional theory (DFT) within the
generalized gradient approximation, the internal degrees of freedom were
relaxed for a pressure range of 0 GPa to 20 Gpa. The influence of pressure on
the lattice vibration spectrum of the scheelite phase (I41/a, Z=4) was
evaluated using the direct approach, i.e. using force constants calculated from
atomic displacements. The transition volume is in good agreement with
experiment, while the transition pressure is overestimated of 6 GPa. At 20 GPa,
a P21/c structure with apentacoordinated lithium cation is found to be the most
stable phase. This structure is compatible with a transition driven by a Bg
zone-center soft optic mode linked to a soft-acoustic mode along the [11-1]
direction as observed for the proper ferroelastic transition of BiVO4
Reduction in mortality from HIV-related CNS infections in routine care in Africa (DREAMM): a before-and-after, implementation study
BACKGROUND: Four decades into the HIV epidemic, CNS infection remains a leading cause of preventable HIV-related deaths in routine care. The Driving Reduced AIDS-associated Meningo-encephalitis Mortality (DREAMM) project aimed to develop, implement, and evaluate pragmatic implementation interventions and strategies to reduce mortality from HIV-related CNS infection. METHODS: DREAMM took place in five public hospitals in Cameroon, Malawi, and Tanzania. The main intervention was a stepwise algorithm for HIV-related CNS infections including bedside rapid diagnostic testing and implementation of WHO cryptococcal meningitis guidelines. A health system strengthening approach for hospitals was adopted to deliver quality care through a co-designed education programme, optimised clinical and laboratory pathways, and communities of practice. DREAMM was led and driven by local leadership and divided into three phases: observation (including situational analyses of routine care), training, and implementation. Consecutive adults (aged ≥18 years) living with HIV presenting with a first episode of suspected CNS infection were eligible for recruitment. The primary endpoint was the comparison of 2-week all-cause mortality between observation and implementation phases. This study completed follow-up in September, 2021. The project was registered on ClinicalTrials.gov, NCT03226379. FINDINGS: From November, 2016 to April, 2019, 139 eligible participants were enrolled in the observation phase. From Jan 9, 2018, to March 25, 2021, 362 participants were enrolled into the implementation phase. 216 (76%) of 286 participants had advanced HIV disease (209 participants had missing CD4 cell count), and 340 (69%) of 494 participants had exposure to antiretroviral therapy (ART; one participant had missing ART data). In the implementation phase 269 (76%) of 356 participants had a probable CNS infection, 203 (76%) of whom received a confirmed microbiological or radiological diagnosis of CNS infection using existing diagnostic tests and medicines. 63 (49%) of 129 participants died at 2 weeks in the observation phase compared with 63 (24%) of 266 in the implementation phase; and all-cause mortality was lower in the implementation phase when adjusted for site, sex, age, ART exposure (adjusted risk difference –23%, 95% CI –33 to –13; p<0·001). At 10 weeks, 71 (55%) died in the observation phase compared with 103 (39%) in the implementation phase (–13%, –24 to –3; p=0·01). INTERPRETATION: DREAMM substantially reduced mortality from HIV-associated CNS infection in resource-limited settings in Africa. DREAMM scale-up is urgently required to reduce deaths in public hospitals and help meet Sustainable Development Goals. FUNDING: European and Developing Countries Clinical Trials Partnership, French Agency for Research on AIDS and Viral Hepatitis. TRANSLATIONS: For the French and Portuguese translations of the abstract see Supplementary Materials section
A randomized controlled trial for the treatment of HIV-associated cryptococcal meningitis in Africa: oral fluconazole plus flucytosine or one week amphotericin-based therapy versus two weeks amphotericin-based therapy. The ACTA Trial
Antifungal Combinations for Treatment of Cryptococcal Meningitis in Africa
Background
Cryptococcal meningitis accounts for more than 100,000 human immunodeficiency virus (HIV)–related deaths per year. We tested two treatment strategies that could be more sustainable in Africa than the standard of 2 weeks of amphotericin B plus flucytosine and more effective than the widely used fluconazole monotherapy.
Methods
We randomly assigned HIV-infected adults with cryptococcal meningitis to receive an oral regimen (fluconazole [1200 mg per day] plus flucytosine [100 mg per kilogram of body weight per day] for 2 weeks), 1 week of amphotericin B (1 mg per kilogram per day), or 2 weeks of amphotericin B (1 mg per kilogram per day). Each patient assigned to receive amphotericin B was also randomly assigned to receive fluconazole or flucytosine as a partner drug. After induction treatment, all the patients received fluconazole consolidation therapy and were followed to 10 weeks.
Results
A total of 721 patients underwent randomization. Mortality in the oral-regimen, 1-week amphotericin B, and 2-week amphotericin B groups was 18.2% (41 of 225), 21.9% (49 of 224), and 21.4% (49 of 229), respectively, at 2 weeks and was 35.1% (79 of 225), 36.2% (81 of 224), and 39.7% (91 of 229), respectively, at 10 weeks. The upper limit of the one-sided 97.5% confidence interval for the difference in 2-week mortality was 4.2 percentage points for the oral-regimen group versus the 2-week amphotericin B groups and 8.1 percentage points for the 1-week amphotericin B groups versus the 2-week amphotericin B groups, both of which were below the predefined 10-percentage-point noninferiority margin. As a partner drug with amphotericin B, flucytosine was superior to fluconazole (71 deaths [31.1%] vs. 101 deaths [45.0%]; hazard ratio for death at 10 weeks, 0.62; 95% confidence interval [CI], 0.45 to 0.84; P=0.002). One week of amphotericin B plus flucytosine was associated with the lowest 10-week mortality (24.2%; 95% CI, 16.2 to 32.1). Side effects, such as severe anemia, were more frequent with 2 weeks than with 1 week of amphotericin B or with the oral regimen.
Conclusions
One week of amphotericin B plus flucytosine and 2 weeks of fluconazole plus flucytosine were effective as induction therapy for cryptococcal meningitis in resource-limited settings. (ACTA Current Controlled Trials number, ISRCTN45035509.
Reduction in mortality from HIV-related CNS infections in routine care in Africa (DREAMM): a before-and-after, implementation study.
BACKGROUND: Four decades into the HIV epidemic, CNS infection remains a leading cause of preventable HIV-related deaths in routine care. The Driving Reduced AIDS-associated Meningo-encephalitis Mortality (DREAMM) project aimed to develop, implement, and evaluate pragmatic implementation interventions and strategies to reduce mortality from HIV-related CNS infection. METHODS: DREAMM took place in five public hospitals in Cameroon, Malawi, and Tanzania. The main intervention was a stepwise algorithm for HIV-related CNS infections including bedside rapid diagnostic testing and implementation of WHO cryptococcal meningitis guidelines. A health system strengthening approach for hospitals was adopted to deliver quality care through a co-designed education programme, optimised clinical and laboratory pathways, and communities of practice. DREAMM was led and driven by local leadership and divided into three phases: observation (including situational analyses of routine care), training, and implementation. Consecutive adults (aged ≥18 years) living with HIV presenting with a first episode of suspected CNS infection were eligible for recruitment. The primary endpoint was the comparison of 2-week all-cause mortality between observation and implementation phases. This study completed follow-up in September, 2021. The project was registered on ClinicalTrials.gov, NCT03226379. FINDINGS: From November, 2016 to April, 2019, 139 eligible participants were enrolled in the observation phase. From Jan 9, 2018, to March 25, 2021, 362 participants were enrolled into the implementation phase. 216 (76%) of 286 participants had advanced HIV disease (209 participants had missing CD4 cell count), and 340 (69%) of 494 participants had exposure to antiretroviral therapy (ART; one participant had missing ART data). In the implementation phase 269 (76%) of 356 participants had a probable CNS infection, 203 (76%) of whom received a confirmed microbiological or radiological diagnosis of CNS infection using existing diagnostic tests and medicines. 63 (49%) of 129 participants died at 2 weeks in the observation phase compared with 63 (24%) of 266 in the implementation phase; and all-cause mortality was lower in the implementation phase when adjusted for site, sex, age, ART exposure (adjusted risk difference -23%, 95% CI -33 to -13; p<0·001). At 10 weeks, 71 (55%) died in the observation phase compared with 103 (39%) in the implementation phase (-13%, -24 to -3; p=0·01). INTERPRETATION: DREAMM substantially reduced mortality from HIV-associated CNS infection in resource-limited settings in Africa. DREAMM scale-up is urgently required to reduce deaths in public hospitals and help meet Sustainable Development Goals. FUNDING: European and Developing Countries Clinical Trials Partnership, French Agency for Research on AIDS and Viral Hepatitis. TRANSLATIONS: For the French and Portuguese translations of the abstract see Supplementary Materials section
The use of two-dimensional long-range <i>δ</i><sub>C</sub>/<i>δ</i><sub>H</sub> correlation in conjunction with the one-dimensional proton-coupled <sup>13</sup>C NMR spectrum in the structural elucidation of ekeberginine, a new carbazole alkaloid from <i>Ekebergia senegalensis</i> (Meliaceae)
A new strategy involving the use of 2D long-range δC/δH correlation in conjunction with the 1D proton-coupled 13C NMR spectrum has been applied to the structural elucidation of ekeberginine, a new carbazole alkaloid from the stem bark of Ekebergia senegalensis (Meliaceae)
Project LAKE TSUNAMIS: ocean-bottom seismometer operations in Lake Lucerne (Switzerland) in 2018-2023
The project "Lake Tsunamis: Causes, Controls, and Hazard (Characterization of subaqueous unstable slopes with geophysical and geotechnical measurements.)" was initiated to understand their governing mechanisms of genesis, propagation, frequency, and the related hazard within an interdisciplinary context. Swiss lakes served as a laboratory for this holistic approach. The project was divided into five work packages (WP), where WP1 comprised a large number of geophysical (using amongst other techniques ocean bottom seismometers (OBS)) and geotechnical measurements to characterize the structure and stability of potentially unstable subaqueous lake slopes.
To evaluate the potential and applicability of ambient vibration techniques in a shallow-water offshore environment, multiple single-station and array OBS measurements were performed on subaqueous slopes in Lake Lucerne. Eight DEPAS Lobster type broadband OBS from the German Instrument Pool for Amphibian Seismology (DEPAS) and one Nammu type OBS from ETH Zürich were successfully deployed and recovered at more than 170 distinct locations in 2018-2020. In 2020-2023 the single Nammu OBS was deployed several times for supplemental measurements. Surveys with an airgun of 1-inch³ volume were used on top of the deployment locations to determine the misorientation of the horizontal components. In addition, multibeam bathymetric surveys were performed to locate the positions of the OBS on the lake floor with high accuracy.
A workflow for passive seismic investigations with OBS in such shallow-water settings was developed. The seismic response and its variability at the measured sites in terms of amplification functions during earthquakes and resonance frequencies was determined. Shear-wave velocity profiles at different morphological types of slopes down to a depth of 100-150 m below the lake floor were resolved and interpreted. Combining geophysical and geotechnical measurements and interpretation, static and dynamic slope-stability analyses were performed. Thresholds for the subaqueous slope-failure triggering in terms of earthquake magnitude and epicentral distance, macroseismic intensity, and ground-motion intensity measures were derived using earthquake ground-motion modelling
Extracting Scholte and Love waves phase-velocity from small aperture Ocean Bottom Seismometer arrays in Lake Lucerne (Switzerland)
A Robust Workflow for Acquiring and Preprocessing Ambient Vibration Data from Small Aperture Ocean Bottom Seismometer Arrays to Extract Scholte and Love Waves Phase-Velocity Dispersion Curves
The phase-velocity dispersion curve (DC) is an important characteristic of the propagation of surface waves in sedimentary environments. Although the procedure for DC estimation in onshore environments using ambient vibration recordings is well established, the DC estimation in offshore environments using Ocean Bottom Seismometers (OBS) array recordings of ambient vibrations presents three additional challenges: (1) the localization of sensors, (2) the orientation of the OBS horizontal components, and (3) the clock error. Here, we address these challenges in an inherent preprocessing workflow to ultimately extract the Love and Scholte wave DC from small aperture OBS array measurements performed between 2018 and 2020 in Lake Lucerne (Switzerland). The arrays have a maximum aperture of 679 m and a maximum deployment water depth of 81 m. The challenges related to the OBS location on the lake floor are addressed by combining the multibeam bathymetry map and the backscatter image for the investigated site with the differential GPS coordinates of the OBS at recovery. The OBS measurements are complemented by airgun surveys. Airgun data are first used to estimate the misorientation of the horizontal components of the OBS and second to estimate the clock error. To assess the robustness of the preprocessing workflow, we use two array processing methods, namely the three-component high-resolution frequency-wavenumber and the interferometric multichannel analysis of surface waves, to estimate the dispersion characteristics of the propagating Scholte and Love waves for one of the OBS array sites. The results show the effectiveness of the preprocessing workflow. We observe the phase-velocity dispersion curve branches in the frequency range between 1.2 and 3.2 Hz for both array processing techniques.ISSN:0033-4553ISSN:1420-9136ISSN:1557-736