Direct visualisation of collateral ventilation in COPD with hyperpolarised gas MRI

Abstract Background Collateral ventilation has been proposed as a mechanism of compensation of respiratory function in obstructive lung diseases but observations of it in vivo are limited. The assessment of collateral ventilation with an imaging technique might help to gain insight into lung physiology and assist the planning of new bronchoscopic techniques for treating emphysema. Objective To obtain images of delayed ventilation that might be related to collateral ventilation over the period of a single breath-hold in patients with chronic obstructive pulmonary disease (COPD). Methods Time-resolved breath-hold hyperpolarised 3He MRI was used to obtain images of the progressive influx of polarised gas into initially non-ventilated defects. Results A time-series of images showed that 3He moves into lung regions which were initially non-ventilated. Ventilation defects with delayed filling were observed in 8 of the 10 patients scanned. Conclusions A method for direct imaging of delayed ventilation within a single breath-hold has been demonstrated in patients with COPD. Images of what is believed to be collateral ventilation and slow filling of peripheral airspaces due to increased flow resistance are presented. The technique provides 3D whole-lung coverage with sensitivity to regional information, and is non-invasive and non-ionising

Response of CO2 and CH4 emissions from Arctic tundra soils to a multifactorial manipulation of water table, temperature and thaw depth

Significant uncertainties persist concerning how Arctic soil tundra carbon emission responds to environmental changes. In this study, 24 cores were sampled from drier (high centre polygons and rims) and wetter (low centre polygons and troughs) permafrost tundra ecosystems. We examined how soil CO2 and CH4 fluxes responded to laboratory-based manipulations of soil temperature (and associated thaw depth) and water table depth, representing current and projected conditions in the Arctic. Similar soil CO2 respiration rates occurred in both the drier and the wetter sites, suggesting that a significant proportion of soil CO2 emission occurs via anaerobic respiration under water-saturated conditions in these Arctic tundra ecosystems. In the absence of vegetation, soil CO2 respiration rates decreased sharply within the first 7 weeks of the experiment, while CH4 emissions remained stable for the entire 26 weeks of the experiment. These patterns suggest that soil CO2 emission is more related to plant input than CH4 production and emission. The stable and substantial CH4 emission observed over the entire course of the experiment suggests that temperature limitations, rather than labile carbon limitations, play a predominant role in CH4 production in deeper soil layers. This is likely due to the presence of a substantial source of labile carbon in these carbon-rich soils. The small soil temperature difference (a median difference of 1 °C) and a more substantial thaw depth difference (a median difference of 6 cm) between the high and low temperature treatments resulted in a non-significant difference between soil CO2 and CH4 emissions. Although hydrology continued to be the primary factor influencing CH4 emissions, these emissions remained low in the drier ecosystem, even with a water table at the surface. This result suggests the potential absence of a methanogenic microbial community in high-centre polygon and rim ecosystems. Overall, our results suggest that the temperature increases reported for these Arctic regions are not responsible for increases in carbon losses. Instead, it is the changes in hydrology that exert significant control over soil CO2 and CH4 emissions

Earlier snowmelt may lead to late season declines in plant productivity and carbon sequestration in Arctic tundra ecosystems

Arctic warming is affecting snow cover and soil hydrology, with consequences for carbon sequestration in tundra ecosystems. The scarcity of observations in the Arctic has limited our understanding of the impact of covarying environmental drivers on the carbon balance of tundra ecosystems. In this study, we address some of these uncertainties through a novel record of 119 site-years of summer data from eddy covariance towers representing dominant tundra vegetation types located on continuous permafrost in the Arctic. Here we found that earlier snowmelt was associated with more tundra net CO2 sequestration and higher gross primary productivity (GPP) only in June and July, but with lower net carbon sequestration and lower GPP in August. Although higher evapotranspiration (ET) can result in soil drying with the progression of the summer, we did not find significantly lower soil moisture with earlier snowmelt, nor evidence that water stress affected GPP in the late growing season. Our results suggest that the expected increased CO2 sequestration arising from Arctic warming and the associated increase in growing season length may not materialize if tundra ecosystems are not able to continue sequestering CO2 later in the season

Water-table height and microtopography control biogeochemical cycling in an Arctic coastal tundra ecosystem

Drained thaw lake basins (DTLB's) are the dominant land form of the Arctic Coastal Plain in northern Alaska. The presence of continuous permafrost prevents drainage and so water tables generally remain close to the soil surface, creating saturated, suboxic soil conditions. However, ice wedge polygons produce microtopographic variation in these landscapes, with raised areas such as polygon rims creating more oxic microenvironments. The peat soils in this ecosystem store large amounts of organic carbon which is vulnerable to loss as arctic regions continue to rapidly warm, and so there is great motivation to understand the controls over microbial activity in these complex landscapes. Here we report the effects of experimental flooding, along with seasonal and spatial variation in soil chemistry and microbial activity in a DTLB. The flooding treatment generally mirrored the effects of natural landscape variation in water-table height due to microtopography. The flooded portion of the basin had lower dissolved oxygen, lower oxidation-reduction potential (ORP) and higher pH, as did lower elevation areas throughout the entire basin. Similarly, soil pore water concentrations of organic carbon and aromatic compounds were higher in flooded and low elevation areas. Dissolved ferric iron (Fe(III)) concentrations were higher in low elevation areas and responded to the flooding treatment in low areas, only. The high concentrations of soluble Fe(III) in soil pore water were explained by the presence of siderophores, which were much more concentrated in low elevation areas. All the aforementioned variables were correlated, showing that Fe(III) is solubilized in response to anoxic conditions. Dissolved carbon dioxide (CO2) and methane (CH4) concentrations were higher in low elevation areas, but showed only subtle and/or seasonally dependent effects of flooding. In anaerobic laboratory incubations, more CH4 was produced by soils from low and flooded areas, whereas anaerobic CO2 production only responded to flooding in high elevation areas. Seasonal changes in the oxidation state of solid phase Fe minerals showed that net Fe reduction occurred, especially in topographically low areas. The effects of Fe reduction were also seen in the topographic patterns of pH, as protons were consumed where this process was prevalent. This suite of results can all be attributed to the effect of water table on oxygen availability: flooded conditions promote anoxia, stimulating dissolution and reduction of Fe(III), and to some extent, methanogenesis. However, two lines of evidence indicated the inhibition of methanogenesis by alternative e- acceptors such as Fe(III) and humic substances: (1) ratios of CO2:CH4 evolved from anaerobic soil incubations and dissolved in soil pore water were high; (2) CH4 concentrations were negatively correlated with the oxidation state of the soluble Fe pool in both topographically high and low areas. A second set of results could be explained by increased soil temperature in the flooding treatment, which presumably arose from the increased thermal conductivity of the soil surface: higher N mineralization rates and dissolved P concentrations were observed in flooded areas. Overall, these results could have implications for C and nutrient cycling in high Arctic areas where warming and flooding are likely consequences of climate change

CIGRO: A Minimal Instruction Set Calligraphic Interface for Sketch-Based Modeling

Abstract. Although CAD systems have evolved considerably in functionality, expressiveness and modeling power over the last decades, their user interfaces are still tied to legacy principles and are not suited to the initial stages of prod-uct development. They exhibit steep learning curves, cumber-some and overly structured dialogues, including hundreds of commands. While much of this functionality may be required by the sheer complexity of the tasks these sys-tems are designed to help, we believe the user interface could benefit from sim-pler paradigms based on sketching and drawing to reduce unneeded complex-ity, especially in the conceptual design phase. In what follows, we present the CIGRO system that provides a reduced instruction set calligraphic interface to create polyhedral objects using an incremental drawing paradigm evocative of paper and pencil drawings. Users draw polylines on an axonometric projection, which are automatically beautified and connected to existing parts of the draw-ing. Such line drawings are then converted to a three-dimensional model through a reconstruction process guided by an axonometric inflation method.