Energy Efficient Ant Colony Algorithms for Data Aggregation in Wireless Sensor Networks

In this paper, a family of ant colony algorithms called DAACA for data aggregation has been presented which contains three phases: the initialization, packet transmission and operations on pheromones. After initialization, each node estimates the remaining energy and the amount of pheromones to compute the probabilities used for dynamically selecting the next hop. After certain rounds of transmissions, the pheromones adjustment is performed periodically, which combines the advantages of both global and local pheromones adjustment for evaporating or depositing pheromones. Four different pheromones adjustment strategies are designed to achieve the global optimal network lifetime, namely Basic-DAACA, ES-DAACA, MM-DAACA and ACS-DAACA. Compared with some other data aggregation algorithms, DAACA shows higher superiority on average degree of nodes, energy efficiency, prolonging the network lifetime, computation complexity and success ratio of one hop transmission. At last we analyze the characteristic of DAACA in the aspects of robustness, fault tolerance and scalability.Comment: To appear in Journal of Computer and System Science

Necrophilous Ants (Hymenoptera: Formicidae) in Diverse Habitats in Taiwan

Ants are a highly diverse group that not only are often strongly associated with certain habitat types, but also can be found on carcasses and, therefore, in crime scenes. In the present study, a survey of the necrophilous ants in Taiwan was conducted and a preliminary species checklist was provided for the first time. The aim of this study was primarily to offer information on Taiwanese ant species of forensic significance. A total of 50 ant species/morphospecies from 26 genera were collected from large scale regions in Taiwan using combination pig liver bait and pitfall traps, bringing the Taiwanese necrophilous ants up to 55 species from 33 genera within the known Taiwanese ant fauna of 288 species from 71 genera. Seventeen species found in this study are tramp or potentially exotic species, which often dominated the baits. Use of pitfall traps increased the diversity of ants collected relative to hand-collecting from the carcass, adding useful data. These necrophilous ants may play important roles in carcass decomposition and can be useful in reconstructing crime scenes, as certain ants are more common in certain habitat types. This checklist and accompanying habitat information of these ants is likely the first such comprehensive data in Taiwan applying ants to the field of forensic entomology

A Clustering-based Location Privacy Protection Scheme for Pervasive Computing

In pervasive computing environments, Location- Based Services (LBSs) are becoming increasingly important due to continuous advances in mobile networks and positioning technologies. Nevertheless, the wide deployment of LBSs can jeopardize the location privacy of mobile users. Consequently, providing safeguards for location privacy of mobile users against being attacked is an important research issue. In this paper a new scheme for safeguarding location privacy is proposed. Our approach supports location K-anonymity for a wide range of mobile users with their own desired anonymity levels by clustering. The whole area of all users is divided into clusters recursively in order to get the Minimum Bounding Rectangle (MBR). The exact location information of a user is replaced by his MBR. Privacy analysis shows that our approach can achieve high resilience to location privacy threats and provide more privacy than users expect. Complexity analysis shows clusters can be adjusted in real time as mobile users join or leave. Moreover, the clustering algorithms possess strong robustness.Comment: The 3rd IEEE/ACM Int Conf on Cyber, Physical and Social Computing (CPSCom), IEEE, Hangzhou, China, December 18-20, 201

miRExpress: Analyzing high-throughput sequencing data for profiling microRNA expression

<p>Abstract</p> <p>Background</p> <p>MicroRNAs (miRNAs), small non-coding RNAs of 19 to 25 nt, play important roles in gene regulation in both animals and plants. In the last few years, the oligonucleotide microarray is one high-throughput and robust method for detecting miRNA expression. However, the approach is restricted to detecting the expression of known miRNAs. Second-generation sequencing is an inexpensive and high-throughput sequencing method. This new method is a promising tool with high sensitivity and specificity and can be used to measure the abundance of small-RNA sequences in a sample. Hence, the expression profiling of miRNAs can involve use of sequencing rather than an oligonucleotide array. Additionally, this method can be adopted to discover novel miRNAs.</p> <p>Results</p> <p>This work presents a systematic approach, miRExpress, for extracting miRNA expression profiles from sequencing reads obtained by second-generation sequencing technology. A stand-alone software package is implemented for generating miRNA expression profiles from high-throughput sequencing of RNA without the need for sequenced genomes. The software is also a database-supported, efficient and flexible tool for investigating miRNA regulation. Moreover, we demonstrate the utility of miRExpress in extracting miRNA expression profiles from two Illumina data sets constructed for the human and a plant species.</p> <p>Conclusion</p> <p>We develop miRExpress, which is a database-supported, efficient and flexible tool for detecting miRNA expression profile. The analysis of two Illumina data sets constructed from human and plant demonstrate the effectiveness of miRExpress to obtain miRNA expression profiles and show the usability in finding novel miRNAs.</p

Inhibitory Effects of Resveratrol on PDGF-BB-Induced Retinal Pigment Epithelial Cell Migration via PDGFRβ, PI3K/Akt and MAPK Pathways

Purpose: In diseases such as proliferative vitreoretinopathy (PVR), proliferative diabetic retinopathy, and age-related macular degeneration, retinal pigment epithelial (RPE) cells proliferate and migrate. Moreover, platelet-derived growth factor (PDGF) has been shown to enhance proliferation and migration of RPE cells in PVR. Even resveratrol can suppress the migration and adhesion of many cell types, its effects on RPE cell migration and adhesion remain unknown. In this study, we investigated the inhibitory effects of resveratrol on RPE cell migration induced by PDGF-BB, an isoform of PDGF, and adhesion to fibronectin, a major ECM component of PVR tissue. Methods: The migration of RPE cells was assessed by an electric cell-substrate impedance sensing migration assay and a Transwell migration assay. A cell viability assay was used to determine the viability of resveratrol treated-cells. The cell adhesion to fibronectin was examined by an adhesion assay. The interactions of resveratrol with PDGF-BB were analyzed by a dot binding assay. The PDGF-BB-induced signaling pathways were determined by western blotting and scratch wound healing assay. Results: Resveratrol inhibited PDGF-BB-induced RPE cell migration in a dose-dependent manner, but showed no effects on ARPE19 cell adhesion to fibronectin. The cell viability assay showed no cytotoxicity of resveratrol on RPE cells and the dot binding assay revealed no direct interactions of resveratrol with PDGF-BB. Inhibitory effects of resveratrol on PDGF-BB-induced platelet-derived growth factor receptor β (PDGFRβ) and tyrosine phosphorylation and the underlying pathways of PI3K/Akt, ERK and p38 activation were found; however, resveratrol and PDGF-BB showed no effects on PDGFRα and JNK activation. Scratch wound healing assay demonstrated resveratrol and the specific inhibitors of PDGFR, PI3K, MEK or p38 suppressed PDGF-BB-induced cell migration. Conclusions: These results indicate that resveratrol is an effective inhibitor of PDGF-BB-induced RPE cell migration via PDGFRβ, PI3K/Akt and MAPK pathways, but has no effects on the RPE cell adhesion to fibronectin

Effect of Blood Pressure Control on Long-Term Risk of End-Stage Renal Disease and Death Among Subgroups of Patients With Chronic&nbsp;Kidney Disease.

Background Our objective was to explore the effect of intensive blood pressure (BP) control on kidney and death outcomes among subgroups of patients with chronic kidney disease divided by baseline proteinuria, glomerular filtration rate, age, and body mass index. Methods and Results We included 840 MDRD (Modification of Diet in Renal Disease) trial and 1067 AASK (African American Study of Kidney Disease and Hypertension) participants. We used Cox models to examine whether the association between intensive BP control and risk of end-stage renal disease (ESRD) or death is modified by baseline proteinuria (≥0.44 versus &lt;0.44&nbsp;g/g), glomerular filtration rate (≥30 versus &lt;30&nbsp;mL/min per 1.73&nbsp;m2), age (≥40 versus &lt;40&nbsp;years), or body mass index (≥30 versus &lt;30&nbsp;kg/m2). The median follow-up was 14.9&nbsp;years. Strict (versus usual) BP control was protective against ESRD (hazard ratio [HR]ESRD, 0.77; 95% CI, 0.64-0.92) among those with proteinuria ≥0.44&nbsp;g/g but not proteinuria &lt;0.44&nbsp;g/g. Strict (versus usual) BP control was protective against death (HRdeath, 0.73; 95% CI, 0.59-0.92) among those with glomerular filtration rate &lt;30&nbsp;mL/min per 1.73&nbsp;m2 but not glomerular filtration rate ≥30&nbsp;mL/min per 1.73&nbsp;m2 (HRdeath, 0.98; 95% CI, 0.84-1.15). Strict (versus usual) BP control was protective against ESRD among those ≥40&nbsp;years (HRESRD, 0.82; 95% CI, 0.71-0.94) but not &lt;40&nbsp;years. Strict (versus usual) BP control was also protective against ESRD among those with body mass index ≥30&nbsp;kg/m2 (HRESRD, 0.75; 95% CI, 0.61-0.92) but not body mass index &lt;30&nbsp;kg/m2. Conclusions The ESRD and all-cause mortality benefits of intensive BP lowering may not be uniform across all subgroups of patients with chronic kidney disease. But intensive BP lowering was not associated with increased risk of ESRD or death among any subgroups that we examined

Analysis of overburden layer thickness influence on dynamic response of concrete face rock-fill dam

In the past, when performing dynamic response analysis of dams on deep overburden, the dam body and the overburden have often been discussed separately. In this paper, the overburden and the dam body are considered as a whole, and the dynamic response analysis is carried out by using a completely nonlinear dynamic analysis method. From the acceleration of the earth’s surface, the displacement of the dam, and the stress distribution of the panel, the dynamic response of the structure is shown to increase first and then decrease with increasing cover thickness, and the overburden layer thickness corresponding to the extreme point is called the critical thickness. The results obtained in this study can provide a design basis for a face rock-fill dam built on a deep overburden layer

Lutein Protects against Methotrexate-Induced and Reactive Oxygen Species-Mediated Apoptotic Cell Injury of IEC-6 Cells

Purpose High-dose chemotherapy using methotrexate (MTX) frequently induces side effects such as mucositis that leads to intestinal damage and diarrhea. Several natural compounds have been demonstrated of their effectiveness in protecting intestinal epithelial cells from these adverse effects. In this paper, we investigated the protection mechanism of lutein against MTX-induced damage in IEC-6 cells originating from the rat jejunum crypt. Methods: The cell viability, induced-apoptosis, reactive oxygen species (ROS) generation, and mitochondrial membrane potential in IEC-6 cells under MTX treatment were examined in the presence or absence of lutein. Expression level of Bcl2, Bad and ROS scavenging enzymes (including SOD, catalase and Prdx1) were detected by quantitative RT-PCR. Results: The cell viability of IEC-6 cells exposed to MTX was decreased in a dose- and time-dependent manner. MTX induces mitochondrial membrane potential loss, ROS generation and caspase 3 activation in IEC-6 cells. The cytotoxicity of MTX was reduced in IEC-6 cells by the 24 h pre-treatment of lutein. We found that pre-treatment of lutein significantly reduces MTX-induced ROS and apoptosis. The expression of SOD was up-regulated by the pre-treatment of lutein in the MTX-treated IEC-6 cells. These results indicated that lutein can protect IEC-6 cells from the chemo-drugs induced damage through increasing ROS scavenging ability. Conclusion: The MTX-induced apoptosis of IEC-6 cells was shown to be repressed by the pre-treatment of lutein, which may represent a promising adjunct to conventional chemotherapy for preventing intestinal damages