204 research outputs found

    Annotated list of new records of marine macroalgae for Kenya and Tanzania, since Isaac's and Jaasund's publications

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    48 species of Rhodophyta, 10 species of Phaeophyta and 38 species of Chlorophyta, newly reported since Isaac's publications on seaweeds from Kenya and Jaasund's papers on macroalgae fiom Tanzania, are listed with bibliograpbic, taxonomic and biogeographic comments. Some of these species were previously published in more detailed taxonomic studies by this paper's authors

    Hunting for nuclear markers in green algal lineages: molecular evolution of glucose-6-phosphate isomerase

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    The Chlorophyta exhibit a remarkable cytological diversity ranging from unicellular microscopic algae with a single nucleus, over multicellular filaments and foliose blades, to coencytic and even siphonous life forms that are essentially composed of a giant cell containing thousands of nuclei. Unravelling the evolutionary history of this diverse and evolutionary old group is a difficult task due to the antiquity of the major lineages and considerable rate variation between those lineages for the commonly used 18S ribosomal DNA sequences and chloroplast markers (Lewis et al., Therefore different genes with known function and sequence data available are tested and more recently a cDNA library is screened to search for new useful genes.Glucose-6-phosphate isomerase (G6PI) is one of the genes we are testing. It is an important enzyme of the carbohydrate biosynthesis pathway in photosynthetic organisms and of the glycolysis in all organisms. Little is known about copy number of the gene in the Chlorophyta. The complete genome sequences of Chlamydomonas reinhardtii and Ostreococcus taur revealed that both have a single copy of G6PI. In plants however within a single genus there are species with one G6PI gene and other species with two G6PI (e.g. Arabidopsis, Actinidia,…) and up to thre copies are observed in Zea mays. It always concerns recent duplication within one genus.To investigate if the G6PI gene(s) is useful as a phylogenetic marker in the Chlorophyta, primers were made based on the G6PI genome sequences of Arabidopsis thaliana, Oryza sativa, Chlamydomonas reinhardtii and Ostreococcus tauri. The primers were tested on DNA and RNA of a variety of green algae.Following conclusions can be drawn from these preliminary results: 1. epiphytic or endophytic bacteria interfere with the direct amplification of nuclear genes; 2. the G6PI gene is informative on several taxonomic levels: for deep phylogenies we have to use a codon substitution model, for species level relationships introns may offer opportunities towards studies at the interspecific level; 3. most likely only one (functional) copy of the G6PI gene is present in the tested taxa

    The Change in Macroalgal Assemblages through the Saldanha Bay/Langebaan Lagoon Ecosystem (South Africa)

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    Saldanha Bay and Langebaan Lagoon form together one of the few sheltered habitats within the Benguela Marine Province; a wide gradient in environmental factors is found here. The West Coast National Park was established to protect this unique ecosystem, but at the same time an industrially expanding harbour marks this area. In an effort to understand the biological composition of the Saldanha/Langebaan ecosystem, the intertidal macroalgal assemblages were studied in relation to the relatively well-known South African West Coast flora. Three distinct floral entities were identified using various analytical techniques (similarity coefficients, CCA and TWINSPAN): (i) the species poor, though distinct, salt marshes; (ii) the Lagoon sites; and (iii) the Bay and West Coast sites. The transition between the latter two is located at the mouth of the Lagoon. The species richness of the Bay/West Coast entity is larger than in the Lagoon. The change in algal composition can be explained in terms of the environmental variables of which wave exposure is the most significant. Other important environmental parameters are water surface temperature and salinity, which were found to be negatively correlated with wave exposure. Biogeographical affinities of the different algal entities of the Bay/Lagoon system were also determined in relation to the entire South African shoreline. The Bay/West Coast entity supports a typical West Coast flora, with some noticeable effects of uplift of subtidal species into the infralittoral fringe and morphological variation in less exposed areas. The algal flora of the Lagoon is also dominated by West Coast species, but is typified by species characteristic of sheltered habitats, and with a number of species which otherwise only occur on the geographically distant South Coast (east of Cape Agulhas). The algae from the salt marshes occur widely in tropical mangroves and warm temperate salt marshes

    Biodiversity studies on seaweeds and echinoderms in the transition between temperate southern Africa and the tropical western lndian Ocean

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    A three-year project bas increased by more than 30 % the number of seaweed and echinoderm species recorded off KwaZulu-Natal, and included some new to science? It demonstrates that we do not need to go to abyssal depths to make a significant and novel contribution to our knowledge of marine biodiversity

    Lack of phylogeographic structure in the freshwater cyanobacterium <i>Microcystis aeruginosa</i> suggests global dispersal

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    Background: Free-living microorganisms have long been assumed to have ubiquitous distributions with little biogeographic signature because they typically exhibit high dispersal potential and large population sizes. However, molecular data provide contrasting results and it is far from clear to what extent dispersal limitation determines geographicstructuring of microbial populations. We aimed to determine biogeographical patterns of the bloom-forming freshwatercyanobacterium Microcystis aeruginosa. Being widely distributed on a global scale but patchily on a regional scale, this prokaryote is an ideal model organism to study microbial dispersal and biogeography.Methodology/Principal Findings: The phylogeography of M. aeruginosa was studied based on a dataset of 311 rDNAinternal transcribed spacer (ITS) sequences sampled from six continents. Richness of ITS sequences was high (239 ITS typeswere detected). Genetic divergence among ITS types averaged 4% (maximum pairwise divergence was 13%). Preliminary analyses revealed nearly completely unresolved phylogenetic relationships and a lack of genetic structure among all sequences due to extensive homoplasy at multiple hypervariable sites. After correcting for this, still no clear phylogeographic structure was detected, and no pattern of isolation by distance was found on a global scale. Concomitantly, genetic differentiation among continents was marginal, whereas variation within continents was high and was mostly shared with all other continents. Similarly, no genetic structure across climate zones was detected.Conclusions/Significance: The high overall diversity and wide global distribution of common ITS types in combination with the lack of phylogeographic structure suggest that intercontinental dispersal of M. aeruginosa ITS types is not rare, and that this species might have a truly cosmopolitan distribution
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