CGIAR modeling approaches for resource constrained scenarios: IV Models for analyzing socio‐economic factors to improve policy recommendations

International crop-related research as conducted by the CGIAR uses crop modelingfor a variety of purposes. By linking crop models with economic models andapproaches, crop model outputs can be effectively used as inputs into socioeco-nomic modeling efforts for priority setting and policy advice using ex-ante impactassessment of technologies and scenario analysis. This requires interdisciplinarycollaboration and very often collaboration across a variety of research organizations.This study highlights the key topics, purposes, and approaches of socioeconomicanalysis within the CGIAR related to cropping systems. Although each CGIARcenter has a different mission, all CGIAR centers share a common strategy of strivingtoward a world free of hunger, poverty, and environmental degradation. This meansresearch is mostly focused toward resource-constrained smallholder farmers. Thereview covers global modeling efforts using the IMPACT model to farm householdbio-economic models for assessing the potential impact of new technologies onfarming systems and livelihoods. Although the CGIAR addresses all aspects of foodsystems, the focus of this review is on crop commodities and the economic analysislinked to crop-growth model results. This study, while not a comprehensive review,provides insights into the richness of the socioeconomic modeling endeavors withinthe CGIAR. The study highlights the need for interdisciplinary approaches to addressthe challenges this type of modeling faces

Is research on marginal lands catching up? The case of unfavourable wheat growing environments*

It is widely believed that the Green Revolution had very little effect in unfavourable or marginal environments. Many researchers have been concerned about the slow progress of technical change in marginal environments and the level of research resources allocated to these areas. This paper provides empirical evidence that there has been significant growth in wheat yield potential in marginal environments, especially during the post-Green Revolution. International yield trial data, covering all major wheat growing environments from 1964 to 1999, were used in estimating the growth in wheat yield potential and changes in yield variability. The global database on wheat varietal adoption and yield gains based on estimated wheat yield growth rates were used to determine production increases due to wheat breeding research. Results show greater progress in shifting the wheat yield frontier in marginal areas, particularly in drought and high temperature environments. Furthermore, yield variability in marginal environments has notably declined, while it has increased slightly in favourable environments. While initial gains came from crossover of varieties from favourable environments, targeted breeding efforts have contributed significantly to more recent productivity growth in marginal environments. Increased production from marginal environments accounted for around 25% of the total wheat production increase in 1997. These findings show greater progress in wheat research and the huge potential of improving wheat productivity in unfavourable environments. © 2003 Elsevier B.V. All rights reserved

Comparative RNA-seq analysis of resistant and susceptible banana genotypes reveals molecular mechanisms in response to banana bunchy top virus (BBTV) infection

Abstract Bananas hold significant economic importance as an agricultural commodity, serving as a primary livelihood source, a favorite fruit, and a staple crop in various regions across the world. However, Banana bunchy top disease (BBTD), which is caused by banana bunchy top virus (BBTV), poses a considerable threat to banana cultivation. To understand the resistance mechanism and the interplay of host suitability factors in the presence of BBTV, we conducted RNA-seq-based comparative transcriptomics analysis on mock-inoculated and BBTV-inoculated samples from resistant (wild Musa balbisiana) and susceptible (Musa acuminata ‘Lakatan’) genotypes. We observed common patterns of expression for 62 differentially expressed genes (DEGs) in both genotypes, which represent the typical defense response of bananas to BBTV. Furthermore, we identified 99 DEGs exclusive to the 'Lakatan' banana cultivar, offering insights into the host factors and susceptibility mechanisms that facilitate successful BBTV infection. In parallel, we identified 151 DEGs unique to the wild M. balbisiana, shedding light on the multifaceted mechanisms of BBTV resistance, involving processes such as secondary metabolite biosynthesis, cell wall modification, and pathogen perception. Notably, our validation efforts via RT-qPCR confirmed the up-regulation of the glucuronoxylan 4-O-methyltransferase gene (14.28 fold-change increase), implicated in xylan modification and degradation. Furthermore, our experiments highlighted the potential recruitment of host's substrate adaptor ADO (30.31 fold-change increase) by BBTV, which may play a role in enhancing banana susceptibility to the viral pathogen. The DEGs identified in this work can be used as basis in designing associated gene markers for the precise integration of resistance genes in marker-assisted breeding programs. Furthermore, the findings can be applied to develop genome-edited banana cultivars targeting the resistance and susceptibility genes, thus developing novel cultivars that are resilient to important diseases