Using Surface Evolver to measure pressures and energies of real 2D foams submitted to quasi-static deformations

International audienceStatic 2D foams have the interesting property that their energy is measurable by summing up the length of their films, so that a simple optical picture of a 2D foam should enable measurement of its energy and other quantities such as its bubbles’ pressures. This operation is of course unrealizable in most experiments since the optical resolution limits the accuracy of length measurements. Here we show that, using image analysis tools alongside an iterative procedure based on the Surface Evolver (Brakke, 1992) to analyze optical images of a 2D foam, we are able to measure accurately its energy and its bubbles’ pressures up to a single multiplying factor. We determine this factor, and validate this procedure, by comparing experimental measurements of the pressure and the work done on a 2D foam experiencing a quasi-static localized deformation with the energy and pressures computed using our procedure

Experimental growth law for bubbles in a "wet" 3D liquid foam

We used X-ray tomography to characterize the geometry of all bubbles in a liquid foam of average liquid fraction $\phi_l\approx 17$ and to follow their evolution, measuring the normalized growth rate $\mathcal{G}=V^{-{1/3}}\frac{dV} {dt}$ for 7000 bubbles. While $\mathcal{G}$ does not depend only on the number of faces of a bubble, its average over $f-$faced bubbles scales as $G_f\sim f-f_0$ for large $f$s at all times. We discuss the dispersion of $\mathcal{G}$ and the influence of $V$ on $\mathcal{G}$.Comment: 10 pages, submitted to PR

Quantitative 3D Characterization of Cellular Materials: Segmentation and Morphology of Foam

International audienceWood, trabecular bone, coral, liquid foams, grains in polycrystals, igneous rock, and even many types of food share many structural similarities and belong to the general class called cellular materials. The visualization of these materials in 3D has been made possible in the last decades through a variety of imaging techniques including magnetic resonance imaging (MRI), micro-computed X-ray tomography ($\mu$CT), and confocal microscopy. Recent advances in synchrotron-based ultra fast tomography have enabled measurements in liquid foams with thousands of bubbles and time resolutions down to 0.5 seconds. Post-processing techniques have, however, not kept pace and extracting useful physical metrics from such measurements is far from trivial. In this manuscript we present and validate a new, fully-automated method for segmenting and labeling the void space in cellular materials where the walls between cells are not visible or present. The individual cell labeling is based on a new tool, the Gradient Guided Watershed, which, while computationally simple, can be robustly scaled to large data-sets. Specifically we demonstrate the utility of this new method on several liquid foams (with varying liquid fraction and polydispersity) composed of thousands of bubbles, and the subsequent quantitative 3D structural characterization of those foams

Anti–inflammatory and antioxidant properties of the ethanol extract of Clerodendrum cyrtophyllum turcz in copper sulfate‐induced inflammation in zebrafish

Oxidative stress and inflammation are commonly present in many chronic diseases. These responses are closely related to pathophysiological processes. The inflammatory process can induce oxidative stress and vice versa through the activation of multiple pathways. Therefore, agents with antioxidant and/or anti-inflammatory activities are very useful in the treatment of many pathologies. Clerodendrum cyrthophyllum Turcz, a plant belonging to the Verbenaceae family, is used in Vietnamese traditional medicine for treating migraine, hypertension, inflammation of the throat, and rheumatic arthritis. Despite its usefulness, studies on its biological properties are still scarce. In this study, ethanol extract (EE) of leaves of C. cyrtophyllum showed protective activity against CuSO4 toxicity. The protective activity was proven to relate to antioxidant and anti-inflammatory properties. EE exhibited relatively high antioxidant activity (IC50 of 16.45 µg/mL) as measured by DPPH assay. In an in vivo anti-antioxidant test, three days post fertilization (dpf) zebrafish larvae were treated with different concentrations of EE for 1 h and then exposed to 10 µM CuSO4 for 20 min to induce oxidative stress. Fluorescent probes were used to detect and quantify oxidative stress by measuring the fluorescent intensity (FI) in larvae. FI significantly decreased in the presence of EE at 5 and 20 µg/mL, demonstrating EE’s profound antioxidant effects, reducing or preventing oxidative stress from CuSO4. Moreover, the co-administration of EE also protected zebrafish larvae against oxidative damage from CuSO4 through down-regulation of hsp70 and gadd45bb expression and upregulation of sod. Due to copper accumulation in zebrafish tissues, the damage and oxidative stress were exacerbated overtime, resulting in the upregulation of genes related to inflammatory processes such as cox-2, pla2, c3a, mpo, and pro- and anti-inflammatory cytokines (il-1ß, il-8, tnf-α, and il-10, respectively). However, the association of CuSO4 with EE significantly decreased the expression of cox-2, pla2, c3a, mpo, il-8, and il-1ß. Taken together, the results suggest that EE has potent antioxidant and anti-inflammatory activities and may be useful in the treatment of various inflammatory diseases

Efficiency of fatty acid-enriched dipteran-based meal on husbandry, digestive activity and immunological responses of Nile tilapia Oreochromis niloticus juveniles

peer reviewedThis study aimed to compare the enrichment capacity of polyunsaturated fatty acids (PUFA) and the long chain polyunsaturated fatty acids (LC-PUFA) of two dipteran species, Hermetia illucens - black soldier fly (BSF) - and a blowfly, Chrysomya putoria (CP), and to test its influence on growth, digestive activities and immune responses of Nile tilapia. Two types of enriched insect larval meal were produced using larvae cultured either on vegetable substrates (VGS) to formulate two diets rich in linolenic acid (ALA) (BSF/VGD and CP/VGD), or on fish offal substrates (FOS), in order to produce two diets rich in ALA and eicosapentaenoic acid (EPA) (BSF/FOD) or in ALA + EPA and docosahexaenoic acid (DHA) (CP/FOD). These four insect-based diets containing only palm oil as a lipid source were compared to a control diet based on fish meal (FM) and fish oil (FO). After 60 days of feeding, ALA or DHA muscle content of fish fed BSF/VGD or CP/FOD diet was comparable to that of the FMFO diet, and all insect diets increased the EPA muscle levels, except for a reduction by the BSF/VGD one. The CP/FOD diet induced similar fish growth, feed efficiency and protein efficiency ratio compared to the control FMFO diet, while a decrease was observed in fish fed other insect diets. Only BSF/VGD led to a decrease in protein and lipid digestibility. CP or BSF larval meal significantly increased alkaline phosphatase activity regardless of fatty acid (FA) enrichment. The expression level of fads2, fads6 and elovl5 was significantly higher in fish fed the BSF/VGD diet compared to fish fed the FMFO diet. FA-enriched insect diets increased some immune variables such as lysozyme, peroxidase and ACH50 values of fish fed CP/FOD, CP/VGD or BSF/VGD diets. Moreover, the expression level of β-defensin-1 and mhcII genes were significantly higher in fish fed the BSF/FOD diet than the FMFO diet. Also, the expression of the pro-inflammatory gene il-1-β was significantly higher in fish fed FMFO diet than in those fed CP/FOD diet, but comparable to fish fed all other diets. No significant effects were observed for the other tested genes. The results showed a better efficiency in LC-PUFA enrichment of the CP larvae compared to BSF ones, resulting in a higher stimulation of the fish nutrient utilization processes and therefore, a higher growth capacity. Nonetheless, all dipteran larval meal stimulated the immune status whatever the insect species or dietary essential fatty acids

Urotensin receptor in GtoPdb v.2021.3

The urotensin-II (U-II) receptor (UT, nomenclature as agreed by the NC-IUPHAR Subcommittee on the Urotensin receptor [26, 36, 93]) is activated by the endogenous dodecapeptide urotensin-II, originally isolated from the urophysis, the endocrine organ of the caudal neurosecretory system of teleost fish [7, 92]. Several structural forms of U-II exist in fish and amphibians [93]. The goby orthologue was used to identify U-II as the cognate ligand for the predicted receptor encoded by the rat gene gpr14 [2, 20, 63, 69, 72]. Human urotensin-II, an 11-amino-acid peptide [20], retains the cyclohexapeptide sequence of goby U-II that is thought to be important in ligand binding [61, 53, 10]. This sequence is also conserved in the deduced amino-acid sequence of rat urotensin-II (14 amino-acids) and mouse urotensin-II (14 amino-acids), although the N-terminal is more divergent from the human sequence [19]. A second endogenous ligand for the UT has been discovered in rat [86]. This is the urotensin II-related peptide, an octapeptide that is derived from a different gene, but shares the C-terminal sequence (CFWKYCV) common to U-II from other species. Identical sequences to rat urotensin II-related peptide are predicted for the mature mouse and human peptides [32]. UT exhibits relatively high sequence identity with somatostatin, opioid and galanin receptors [93]

Urotensin receptor in GtoPdb v.2023.1

The urotensin-II (U-II) receptor (UT, nomenclature as agreed by the NC-IUPHAR Subcommittee on the Urotensin receptor [26, 36, 94]) is activated by the endogenous dodecapeptide urotensin-II, originally isolated from the urophysis, the endocrine organ of the caudal neurosecretory system of teleost fish [7, 93]. Several structural forms of U-II exist in fish and amphibians [94]. The goby orthologue was used to identify U-II as the cognate ligand for the predicted receptor encoded by the rat gene gpr14 [2, 20, 63, 69, 72]. Human urotensin-II, an 11-amino-acid peptide [20], retains the cyclohexapeptide sequence of goby U-II that is thought to be important in ligand binding [61, 53, 10]. This sequence is also conserved in the deduced amino-acid sequence of rat urotensin-II (14 amino-acids) and mouse urotensin-II (14 amino-acids), although the N-terminal is more divergent from the human sequence [19]. A second endogenous ligand for the UT has been discovered in rat [86]. This is the urotensin II-related peptide, an octapeptide that is derived from a different gene, but shares the C-terminal sequence (CFWKYCV) common to U-II from other species. Identical sequences to rat urotensin II-related peptide are predicted for the mature mouse and human peptides [32]. UT exhibits relatively high sequence identity with somatostatin, opioid and galanin receptors [94]. The urotensinergic system displays an unprecedented repertoire of four or five ancient UT in some vertebrate lineages and five U-II family peptides in teleost fish [91]

Urotensin receptor (version 2019.4) in the IUPHAR/BPS Guide to Pharmacology Database

The urotensin-II (U-II) receptor (UT, nomenclature as agreed by the NC-IUPHAR Subcommittee on the Urotensin receptor [26, 36, 89]) is activated by the endogenous dodecapeptide urotensin-II, originally isolated from the urophysis, the endocrine organ of the caudal neurosecretory system of teleost fish [7, 88]. Several structural forms of U-II exist in fish and amphibians. The goby orthologue was used to identify U-II as the cognate ligand for the predicted receptor encoded by the rat gene gpr14 [20, 62, 68, 70]. Human urotensin-II, an 11-amino-acid peptide [20], retains the cyclohexapeptide sequence of goby U-II that is thought to be important in ligand binding [53, 11]. This sequence is also conserved in the deduced amino-acid sequence of rat urotensin-II (14 amino-acids) and mouse urotensin-II (14 amino-acids), although the N-terminal is more divergent from the human sequence [19]. A second endogenous ligand for the UT has been discovered in rat [83]. This is the urotensin II-related peptide, an octapeptide that is derived from a different gene, but shares the C-terminal sequence (CFWKYCV) common to U-II from other species. Identical sequences to rat urotensin II-related peptide are predicted for the mature mouse and human peptides [32]. UT exhibits relatively high sequence identity with somatostatin, opioid and galanin receptors [89]