105 research outputs found

    Extended radio emission in the galaxy cluster MS 0735.6+7421 detected with the Karl G. Jansky Very Large Array

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    MS 0735.6+7421 (z=0.216z = 0.216) is a massive cool core galaxy cluster hosting one of the most powerful active galactic nuclei (AGN) outbursts known. The radio jets of the AGN have carved out an unusually large pair of X-ray cavities, each reaching a diameter of 200200 kpc. This makes MS 0735.6+7421 a unique case to investigate active galactic nuclei feedback processes, as well as other cluster astrophysics at radio wavelengths. We present new low-radio-frequency observations of MS 0735.6+7421 taken with the Karl G. Jansky Very Large Array (VLA): 5 hours of P-band (224−480224-480 MHz) and 5 hours of L-band (1−21-2 GHz) observations, both in C configuration. Our VLA P-band (224−480224-480 MHz) observations reveal the presence of a new diffuse radio component reaching a scale of ∌\sim 900900 kpc in the direction of the jets and of ∌\sim 500500 kpc in the direction perpendicular to the jets. This component is centered on the cluster core and has a radio power scaled at 1.41.4 GHz of P1.4 GHz=(4±2)×1024P_{1.4\text{ GHz}} = (4\pm2)\times 10^{24} WHz−1^{-1}. Its properties are consistent with those expected from a radio mini-halo as seen in other massive cool core clusters, although it may also be associated with radio plasma that has diffused out of the X-ray cavities. Observations at higher spatial resolution are needed to fully characterize the properties and nature of this component. We also suggest that if radio mini-halos originate from jetted activity, we may be witnessing the early stages of this process.Comment: 11 pages, 7 figures, submitted to MNRA

    The structure of cluster merger shocks: turbulent width and the electron heating time-scale

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    We present a new 2 Ms Chandra observation of the cluster merger Abell 2146, which hosts two huge M∌2 shock fronts each ∌500 kpc across. For the first time, we resolve and measure the width of cluster merger shocks. The best-fit width for the bow shock is 17 ± 1 kpc and for the upstream shock is 10.7 ± 0.3 kpc. A narrow collisionless shock will appear broader in projection if its smooth shape is warped by local gas motions. We show that both shock widths are consistent with collisionless shocks blurred by local gas motions of 290 ± 30 km s −1. The upstream shock forms later on in the merger than the bow shock and is therefore expected to be significantly narrower. From the electron temperature profile behind the bow shock, we measure the timescale for the electrons and ions to come back into thermal equilibrium. We rule out rapid thermal equilibration of the electrons with the shock-heated ions at the 6σ level. The observed temperature profile instead favours collisional equilibration. We find no evidence for electron heating over that produced by adiabatic compression. This supports the existing picture from collisionless shocks in the solar wind and supernova remnants. The upstream shock is consistent with this result but has a more complex structure, including a ∌ 2 keV increase in temperature ∌50 kpc ahead of the shock

    RNA motif search with data-driven element ordering

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    BACKGROUND: In this paper, we study the problem of RNA motif search in long genomic sequences. This approach uses a combination of sequence and structure constraints to uncover new distant homologs of known functional RNAs. The problem is NP-hard and is traditionally solved by backtracking algorithms. RESULTS: We have designed a new algorithm for RNA motif search and implemented a new motif search tool RNArobo. The tool enhances the RNAbob descriptor language, allowing insertions in helices, which enables better characterization of ribozymes and aptamers. A typical RNA motif consists of multiple elements and the running time of the algorithm is highly dependent on their ordering. By approaching the element ordering problem in a principled way, we demonstrate more than 100-fold speedup of the search for complex motifs compared to previously published tools. CONCLUSIONS: We have developed a new method for RNA motif search that allows for a significant speedup of the search of complex motifs that include pseudoknots. Such speed improvements are crucial at a time when the rate of DNA sequencing outpaces growth in computing. RNArobo is available at http://compbio.fmph.uniba.sk/rnarobo. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-016-1074-x) contains supplementary material, which is available to authorized users
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