Carbon and nitrogen isotope records of the Hirnantian glaciation

The Hirnantian mass extinction was the second largest of the Phanerozoic. A global sea level fall resulting from a glaciation on Gondwanaland caused significant changes in ocean circulation patterns and nutrient cycling that is recorded as a worldwide positive δ¹³C excursion. In chapter 2, carbon and nitrogen isotope profiles were reconstructed from two North American carbonate platforms in Nevada and one in the Yukon with the purpose of gaining a better understanding of proximal to proximal gradients in δ¹³C values from Hirnantian epeiric seaway sediment. Positive δ¹³C excursions are recorded in bulk inorganic and organic carbon fractions from all three sections, and in graptolite periderms from one section. A larger positive excursion is recorded in the proximal sediment (7‰) compared to proximal sediment (3-4‰). This gradient appears to reflect differences in surface water dissolved inorganic carbon δ¹³C values across epeiric seas. These findings are consistent with the carbonate weathering hypothesis, that predicts larger positive δ¹³C shifts in proximal settings of tropical epeiric seas resulting from changes in the local carbon weathering flux caused by the exposure of vast areas of carbonate sediment during glacioeustatic sea level fall and restricted shelf circulation. A 2‰ positive excursion in δ¹⁵N is interpreted to result from increased ocean ventilation, greater partitioning of atmospheric oxygen into downwelling surface waters, oxygen minimum zone shrinkage, and declining denitrification rates. This allowed for upwelling of recycled nitrogen with high δ¹⁵N values into the photic zone that forced exported organic matter from the photic zone to higher δ¹⁵N values, consistent with the observed positive shift in δ¹⁵N during the Hirnantian glaciation. This study presents a conceptual model to explain secular changes in δ¹³C and δ¹⁵N during the transition from a greenhouse to icehouse climate. The second focus of this research, presented in chapter 3, was on improving the chemical and analytical methods for δ¹⁸O analysis of biogenic apatites. The technique applies cation exchange chromatography that allows for small sample sizes of apatite (200 µg) to be used for chemical conversion to Ag3PO4. The precision (0.15‰, 1σ) of δ¹⁸O analysis obtained using a Thermal Conversion Elemental Analyser Continuous Flow – Isotope Ratio Mass Spectrometer (TC/EA CF-IRMS), and the ability to collect multipe isotopes (O, Ca, Sr, REE) using a cation exchange column, makes this technique valuable for high-resolution, multi-isotope studies of biogenic apatites

The Eighteenth Data Release of the Sloan Digital Sky Surveys: Targeting and First Spectra from SDSS-V

The eighteenth data release of the Sloan Digital Sky Surveys (SDSS) is the first one for SDSS-V, the fifth generation of the survey. SDSS-V comprises three primary scientific programs, or "Mappers": Milky Way Mapper (MWM), Black Hole Mapper (BHM), and Local Volume Mapper (LVM). This data release contains extensive targeting information for the two multi-object spectroscopy programs (MWM and BHM), including input catalogs and selection functions for their numerous scientific objectives. We describe the production of the targeting databases and their calibration- and scientifically-focused components. DR18 also includes ~25,000 new SDSS spectra and supplemental information for X-ray sources identified by eROSITA in its eFEDS field. We present updates to some of the SDSS software pipelines and preview changes anticipated for DR19. We also describe three value-added catalogs (VACs) based on SDSS-IV data that have been published since DR17, and one VAC based on the SDSS-V data in the eFEDS field.Comment: Accepted to ApJ

The eighteenth data release of the Sloan Digital Sky Surveys : targeting and first spectra from SDSS-V

The eighteenth data release of the Sloan Digital Sky Surveys (SDSS) is the first one for SDSS-V, the fifth generation of the survey. SDSS-V comprises three primary scientific programs, or "Mappers": Milky Way Mapper (MWM), Black Hole Mapper (BHM), and Local Volume Mapper (LVM). This data release contains extensive targeting information for the two multi-object spectroscopy programs (MWM and BHM), including input catalogs and selection functions for their numerous scientific objectives. We describe the production of the targeting databases and their calibration- and scientifically-focused components. DR18 also includes ~25,000 new SDSS spectra and supplemental information for X-ray sources identified by eROSITA in its eFEDS field. We present updates to some of the SDSS software pipelines and preview changes anticipated for DR19. We also describe three value-added catalogs (VACs) based on SDSS-IV data that have been published since DR17, and one VAC based on the SDSS-V data in the eFEDS field.Publisher PDFPeer reviewe

SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues

Variability in SARS-CoV-2 susceptibility and COVID-19 disease severity between individuals is partly due to genetic factors. Here, we identify 4 genomic loci with suggestive associations for SARS-CoV-2 susceptibility and 19 for COVID-19 disease severity. Four of these 23 loci likely have an ethnicity-specific component. Genome-wide association study (GWAS) signals in 11 loci colocalize with expression quantitative trait loci (eQTLs) associated with the expression of 20 genes in 62 tissues/cell types (range: 1:43 tissues/gene), including lung, brain, heart, muscle, and skin as well as the digestive system and immune system. We perform genetic fine mapping to compute 99% credible SNP sets, which identify 10 GWAS loci that have eight or fewer SNPs in the credible set, including three loci with one single likely causal SNP. Our study suggests that the diverse symptoms and disease severity of COVID-19 observed between individuals is associated with variants across the genome, affecting gene expression levels in a wide variety of tissue types

A first update on mapping the human genetic architecture of COVID-19

peer reviewe