Spatial Interference: From Coherent To Incoherent

It is well known that direct observation of interference and diffraction pattern in the intensity distribution requires a spatially coherent source. Optical waves emitted from portions beyond the coherence area possess statistically independent phases, and will degrade the interference pattern. In this paper we show an optical interference experiment, which seems contrary to our common knowledge, that the formation of the interference pattern is related to a spatially incoherent light source. Our experimental scheme is very similar to Gabor's original proposal of holography[1], just with an incoherent source replacing the coherent one. In the statistical ensemble of the incoherent source, each sample field produces a sample interference pattern between object wave and reference wave. These patterns completely differ from each other due to the fluctuation of the source field distribution. Surprisingly, the sum of a great number of sample patterns exhibits explicitly an interference pattern, which contains all the information of the object and is equivalent to a hologram in the coherent light case. In this sense our approach would be valuable in holography and other interference techniques for the case where coherent source is unavailable, such as x-ray and electron sources.Comment: 8 pages, 5 figure

Neutron Scattering Measurements of Spatially Anisotropic Magnetic Exchange Interactions in Semiconducting K0.85Fe1.54Se2 (TN=280 K)

We use neutron scattering to study the spin excitations associated with the stripe antiferromagnetic (AFM) order in semiconducting K$_{0.85}$Fe$_{1.54}$Se$_2$ ($T_N$=$280$ K). We show that the spin wave spectra can be accurately described by an effective Heisenberg Hamiltonian with highly anisotropic in-plane couplings at $T$= $5$ K. At high temperature ($T$= $300$ K) above $T_N$, short range magnetic correlation with anisotropic correlation lengths are observed. Our results suggest that, despite the dramatic difference in the Fermi surface topology, the in-plane anisotropic magnetic couplings are a fundamental property of the iron based compounds; this implies that their antiferromagnetism may originate from local strong correlation effects rather than weak coupling Fermi surface nesting.Comment: 5 pages, 4 figure

A local structural descriptor for image matching via normalized graph laplacian embedding

This paper investigates graph spectral approaches to the problem of point pattern matching. Specifically, we concentrate on the issue of how to effectively use graph spectral properties to characterize point patterns in the presence of positional jitter and outliers. A novel local spectral descriptor is proposed to represent the attribute domain of feature points. For a point in a given point-set, weight graphs are constructed on its neighboring points and then their normalized Laplacian matrices are computed. According to the known spectral radius of the normalized Laplacian matrix, the distribution of the eigenvalues of these normalized Laplacian matrices is summarized as a histogram to form a descriptor. The proposed spectral descriptor is finally combined with the approximate distance order for recovering correspondences between point-sets. Extensive experiments demonstrate the effectiveness of the proposed approach and its superiority to the existing methods

Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays

BACKGROUND: Extracting biological information from high-density Affymetrix arrays is a multi-step process that begins with the accurate annotation of microarray probes. Shortfalls in the original Affymetrix probe annotation have been described; however, few studies have provided rigorous solutions for routine data analysis. RESULTS: Using AceView, a comprehensive human transcript database, we have reannotated the probes by matching them to RNA transcripts instead of genes. Based on this transcript-level annotation, a new probe set definition was created in which every probe in a probe set maps to a common set of AceView gene transcripts. In addition, using artificial data sets we identified that a minimal probe set size of 4 is necessary for reliable statistical summarization. We further demonstrate that applying the new probe set definition can detect specific transcript variants contributing to differential expression and it also improves cross-platform concordance. CONCLUSION: We conclude that our transcript-level reannotation and redefinition of probe sets complement the original Affymetrix design. Redefinitions introduce probe sets whose sizes may not support reliable statistical summarization; therefore, we advocate using our transcript-level mapping redefinition in a secondary analysis step rather than as a replacement. Knowing which specific transcripts are differentially expressed is important to properly design probe/primer pairs for validation purposes. For convenience, we have created custom chip-description-files (CDFs) and annotation files for our new probe set definitions that are compatible with Bioconductor, Affymetrix Expression Console or third party software

Habituation of the C-start response in larval zebrafish exhibits several distinct phases and sensitivity to NMDA receptor blockade.

The zebrafish larva has been a valuable model system for genetic and molecular studies of development. More recently, biologists have begun to exploit the surprisingly rich behavioral repertoire of zebrafish larvae to investigate behavior. One prominent behavior exhibited by zebrafish early in development is a rapid escape reflex (the C-start). This reflex is mediated by a relatively simple neural circuit, and is therefore an attractive model behavior for neurobiological investigations of simple forms of learning and memory. Here, we describe two forms of short-lived habituation of the C-start in response to brief pulses of auditory stimuli. A rapid form, persisting for ≥1 min but <15 min, was induced by 120 pulses delivered at 0.5-2.0 Hz. A more extended form (termed "short-term habituation" here), which persisted for ≥25 min but <1 h, was induced by spaced training. The spaced training consisted of 10 blocks of auditory pulses delivered at 1 Hz (5 min interblock interval, 900 pulses per block). We found that these two temporally distinguishable forms of habituation are mediated by different cellular mechanisms. The short-term form depends on activation of N-methyl-d-aspartate receptors (NMDARs), whereas the rapid form does not

Antimicrobial effects of free nitrous acid on Desulfovibrio vulgaris: Implications for sulfide-induced corrosion of concrete

Hydrogen sulfide produced by sulfate reducing bacteria (SRB) in sewers causes odor problems and asset deterioration due to the sulfide induced concrete corrosion. Free nitrous acid (FNA) was recently demonstrated as a promising antimicrobial agent to alleviate hydrogen sulfide production in sewers. However, knowledge of the antimicrobial mechanisms of FNA is largely unknown. Here we report the multiple-targeted antimicrobial effects of FNA on the SRB Desulfovibrio vulgaris Hildenborough by determining growth, physiological and gene expression responses to FNA exposure. The activities of growth, respiration and ATP generation were inhibited when exposed to FNA. These changes were reflected in transcript levels detected during exposure. Removal of FNA was evident by nitrite reduction that likely involved nitrite reductase and the poorly characterised hybrid cluster protein, and the genes coding for these proteins were highly expressed. During FNA exposure lowered ribosome activity and protein production were detected. Additionally, conditions within the cells were more oxidising and there was evidence of oxidative stress. Based on interpretation of the measured responses we present a model depicting the antimicrobial effects of FNA on D. vulgaris. These findings provide new insight for understanding the responses of D. vulgaris to FNA and will provide foundation for optimal application of this antimicrobial agent for improved control of sewer corrosion and odor management

Enhanced Orbital Degeneracy in Momentum Space for LaOFeAs

The Fermi surfaces (FS) of LaOFeAs (in $k_z$=0 plane) consist of two hole-type circles around $\Gamma$ point, which do not touch each other, and two electron-type co-centered ellipses around M point, which are degenerate along the M-X line. By first-principles calculations, here we show that additional degeneracy exists for the two electron-type FS, and the crucial role of F-doping and pressure is to enhance this orbital degeneracy. It is suggested that the inter-orbital fluctuation is the key point to understand the unconventional superconductivity in these materials.Comment: 4 pages, 5 figure