Shape-induced phenomena in the finite size antiferromagnets

It is of common knowledge that the direction of easy axis in the finite-size ferromagnetic sample is controlled by its shape. In the present paper we show that a similar phenomenon should be observed in the compensated antiferromagnets with strong magnetoelastic coupling. Destressing energy which originates from the long-range magnetoelastic forces is analogous to demagnetization energy in ferromagnetic materials and is responsible for the formation of equilibrium domain structure and anisotropy of macroscopic magnetic properties. In particular, crystal shape may be a source of additional uniaxial magnetic anisotropy which removes degeneracy of antiferromagnetic vector or artificial 4th order anisotropy in the case of a square cross-section sample. In a special case of antiferromagnetic nanopillars shape-induced anisotropy can be substantially enhanced due to lattice mismatch with the substrate. These effects can be detected by the magnetic rotational torque and antiferromagnetic resonance measurements.Comment: 7 pages, 5 figures, to appear in Phys. Rev. B, v.75, N17, 200

Interannual variability of the South Indian Countercurrent

Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 3465–3487, doi:10.1002/2015JC011417.In the present work, we investigate the interannual variability of the South Indian Countercurrent (SICC), a major and still understudied current of the Indian Ocean circulation. To characterize the interannual variability of the SICC, four different data sets (altimetry, GLORYS, OFAM3, and SODA) are analyzed using multiple tools, which include Singular Spectrum Analysis and wavelet methods. The quasi-biennial band dominates the SICC low-frequency variance, with the main peak in the 1.5–1.8 year interval. A secondary peak (2.1–2.5 year) is only found in the western basin. Interannual and decadal-type modulations of the quasi-biennial signal are also identified. In addition, limitations of SODA before the 1960s in the SICC region are revealed. Within the quasi-biennial band, the SICC system presents two main patterns with a multiple jet structure. One pattern is characterized by a robust northern jet, while in the other the central jet is well developed and northern jet is weaker. In both patterns, the southern jet has always a strong signature. When the northern SICC jet is stronger, the northern cell of the subtropical gyre has a triangular shape, with its southern limb having a strong equatorward slant. The quasi-biennial variability of the SICC is probably related to the Indian Ocean tropical climate modes that are known to have a strong biennial characteristic.ARC Discovery Project Grant Number: DP130102088; NSF Grant Number: OCE-091716; Ocean Science Division of VM Oceanica2016-11-2

The speaking vocabulary of grade two

Thesis (M.A.)--Boston Universit

Current Star Formation in the Ophiuchus and Perseus Molecular Clouds: Constraints and Comparisons from Unbiased Submillimeter and Mid-Infrared Surveys. II

We present a census of the population of deeply embedded young stellar objects (YSOs) in the Ophiuchus molecular cloud complex based on a combination of Spitzer Space Telescope mid-infrared data from the "Cores to Disks" (c2d) legacy team and JCMT/SCUBA submillimeter maps from the COMPLETE team. We have applied a method developed for identifying embedded protostars in Perseus to these datasets and in this way construct a relatively unbiased sample of 27 candidate embedded protostars with envelopes more massive than our sensitivity limit (about 0.1 M_sun). Embedded YSOs are found in 35% of the SCUBA cores - less than in Perseus (58%). On the other hand the mid-infrared sources in Ophiuchus have less red mid-infrared colors, possibly indicating that they are less embedded. We apply a nearest neighbor surface density algorithm to define the substructure in each of the clouds and calculate characteristic numbers for each subregion - including masses, star formation efficiencies, fraction of embedded sources etc. Generally the main clusters in Ophiuchus and Perseus (L1688, NGC1333 and IC348) are found to have higher star formation efficiencies than small groups such as B1, L1455 and L1448, which on the other hand are completely dominated by deeply embedded protostars. We discuss possible explanations for the differences between the regions in Perseus and Ophiuchus, such as different evolutionary timescales for the YSOs or differences, e.g., in the accretion in the two clouds.Comment: Accepted for publication in ApJ (56 pages, 13 figures; abstract abridged). Version with full-resolution figures available at http://www.astro.uni-bonn.de/~jes/paper120.pd

Integrated stratigraphy of the Kimmeridge Clay Formation (Upper Jurassic) based on exposures and boreholes in south Dorset, UK

For the purposes of a high-resolution multi-disciplinary study of the Upper Jurassic Kimmeridge Clay Formation, two boreholes were drilled at Swanworth Quarry and one at Metherhills, south Dorset, UK. Together, the cores represent the first complete section through the entire formation close to the type section. We present graphic logs that record the stratigraphy of the cores, and outline the complementary geophysical and analytical data sets (gamma ray, magnetic susceptibility, total organic carbon, carbonate, [delta]13Corg). Of particular note are the new borehole data from the lowermost part of the formation which does not crop out in the type area. Detailed logs are available for download from the Kimmeridge Drilling Project web-site at http://kimmeridge.earth.ox.ac.uk/. Of further interest is a mid-eudoxus Zone positive shift in the [delta]13Corg record, a feature that is also registered in Tethyan carbonate successions, suggesting that it is a regional event and may therefore be useful for correlation. The lithostratigraphy of the cores has been precisely correlated with the nearby cliff section, which has also been examined and re-described. Magnetic-susceptibility and spectral gamma-ray measurements were made at a regular spacing through the succession, and facilitate core-to-exposure correlation. The strata of the exposure and core have been subdivided into four main mudrock lithological types: (a) medium-dark–dark-grey marl; (b) medium-dark–dark grey–greenish black shale; (c) dark-grey–olive-black laminated shale; (d) greyish-black–brownish-black mudstone. The sections also contain subordinate amounts of siltstone, limestone and dolostone. Comparison of the type section with the cores reveals slight lithological variation and notable thickness differences between the coeval strata. The proximity of the boreholes and different parts of the type section to the Purbeck–Isle of Wight Disturbance is proposed as a likely control on the thickness changes

Dynamic clonal progression in xenografts of acute lymphoblastic leukemia with intrachromosomal amplification of chromosome 21

Intrachromosomal amplification of chromosome 21 is a heterogeneous chromosomal rearrangement occurring in 2% of childhood precursor B-cell acute lymphoblastic leukemia. There are no cell lines with iAMP21 and these abnormalities are too complex to faithfully engineer in animal models. As a resource for future functional and pre-clinical studies, we have created xenografts from intrachromosomal amplification of chromosome 21 leukemia patient blasts and characterised them by in-vivo and ex-vivo luminescent imaging, FLOW immunophenotyping, and histological and ultrastructural analysis of bone marrow and the central nervous system. Investigation of up to three generations of xenografts revealed phenotypic evolution, branching genomic architecture and, compared with other B-cell acute lymphoblastic leukemia genetic subtypes, greater clonal diversity of leukemia initiating cells. In support of intrachromosomal amplification of chromosome 21 as a primary genetic abnormality, it was always retained through generations of xenografts, although we also observed the first example of structural evolution of this rearrangement. Clonal segregation in xenografts revealed convergent evolution of different secondary genomic abnormalities implicating several known tumour suppressor genes and a region, containing the B-cell adaptor, PIK3AP1, and nuclear receptor co-repressor, LCOR, in the progression of B-ALL. Tracking of mutations in patients and derived xenografts provided evidence for co-operation between abnormalities activating the RAS pathway in B-ALL and for their aggressive clonal expansion in the xeno-environment. Bi-allelic loss of the CDKN2A/B locus was recurrently maintained or emergent in xenografts and also strongly selected as RNA sequencing demonstrated a complete absence of reads for genes associated with the deletions

The Distribution of Mating-Type Bias in Natural Populations of the Anther-Smut Ustilago violacea on Silene alba in Virginia

This is the publisher's version, also available electronically from http://www.jstor.org/stable/info/3761395.Complete individual-wide mating-type bias (retrieval of sporidia of only one mating type from germinated teliospores of one fungal individual) was observed to be a common and widespread feature of the anther-smut fungus, Ustilago violacea, collected from natural populations of its host, Silene alba. The bias was usually to mating type A1, but the frequency of bias and its spatial distribution varied from region to region. Populations with high frequencies of bias still showed high rates of disease transmission. Crosses between A1 mating type sporidial lines from completely biased individuals and A2 mating types from unbiased individuals showed no bias in the progeny. During teliospore germination, biased individuals often showed conjugation among adjacent cells of the promycelium, suggesting that both mating types are present in the germinating teliospore but one mating type is unable to grow as free-living sporidia. The complete bias was most readily interpreted as evidence of "haploid lethals" linked to mating type that cause poor survival or growth of the sporidial stage. The results show that such "haploid lethals" may be a common occurrence in natural populations, and that fungal mating systems may vary considerably over short distances

DGT-induced copper flux predicts bioaccumulation and toxicity to bivalves in sediments with varying properties

Many regulatory frameworks for sediment quality assessment include consideration of contaminant bioavailability. However, the “snap-shots” of metal bioavailability provided by analyses of porewaters or acid-volatile sulfidesimultaneously extractable metal (AVS-SEM) relationships do not always contribute sufficient information. The use of inappropriate or inadequate information for assessing metal bioavailability in sediments may result in incorrect assessment decisions. The technique of diffusive gradients in thin films (DGT) enables the in situ measurement of metal concentrations in waters and fluxes from sediment porewaters. We utilized the DGT technique to interpret the bioavailability of copper to the benthic bivalve Tellina deltoidalis in sediments of varying properties contaminated with copper-based antifouling paint particles. For a concentration series of copper-paint contaminated sandy, silty-sand, and silty sediment types, DGTprobes were used to measure copper fluxes to the overlying water, at the sedimentwater interface, and in deeper sediments. The overlying water copper concentrations and DGT-Cu fluxes were shown to provide excellent exposure concentration−response relationships in relation to lethal effects occurring to the copper-sensitive benthic bivalve, T. deltoidalis. The study demonstrates the strength of the DGT technique, which we expect will become frequently used for assessing metal bioavailability in sediments

Chromosome Model reveals Dynamic Redistribution of DNA Damage into Nuclear Sub-domains

Several proteins involved in the response to DNA double strand breaks (DSB) form microscopically visible nuclear domains, or foci, after exposure to ionizing radiation. Radiation-induced foci (RIF) are believed to be located where DNA damage is induced. To test this assumption, we analyzed the spatial distribution of 53BP1, phosphorylated ATM and gammaH2AX RIF in cells irradiated with high linear energy transfer (LET) radiation. Since energy is randomly deposited along high-LET particle paths, RIF along these paths should also be randomly distributed. The probability to induce DSB can be derived from DNA fragment data measured experimentally by pulsed-field gel electrophoresis. We used this probability in Monte Carlo simulations to predict DSB locations in synthetic nuclei geometrically described by a complete set of human chromosomes, taking into account microscope optics from real experiments. As expected, simulations produced DNA-weighted random (Poisson) distributions. In contrast, the distributions of RIF obtained as early as 5 min after exposure to high LET (1 GeV/amu Fe) were non-random. This deviation from the expected DNA-weighted random pattern can be further characterized by relative DNA image measurements. This novel imaging approach shows that RIF were located preferentially at the interface between high and low DNA density regions, and were more frequent in regions with lower density DNA than predicted. This deviation from random behavior was more pronounced within the first 5 min following irradiation for phosphorylated ATM RIF, while gammaH2AX and 53BP1 RIF showed very pronounced deviation up to 30 min after exposure. These data suggest the existence of repair centers in mammalian epithelial cells. These centers would be nuclear sub-domains where DNA lesions would be collected for more efficient repair