Antiaggregation Activity of Chaperones and Its Quantification

The spacial structure of proteins is rather labile and depends on external conditions. Stress conditions can cause formation of unfolded protein forms that exhibit enhanced tendency to aggregation. During biosynthesis of proteins in cells, folding of the newly synthesized polypeptide chains can be accompanied by formation of non-native protein forms with a tendency to aggregate The family of small heat shock proteins (sHsp) has a special place among the heat shock proteins; the main function of sHsp is suppression of aggregation of nonnative protein forms. Representatives of this family are found in almost all living organisms. The low molecular mass of monomers (from 12 to 43 kDa) and tendency to formation of large oligomers with molecular masses up to 1000 kDa are typical of this protein family sHsp-protein substrate complexes are characterized by a high degree of polydispersity REVIEW 1554 Abbreviations: GAPDH, glycerlaldehyde-3-phosphate dehydrogenase; HP-β-CD, 2-hydroxypropyl-β-cyclodextrin; Phb, glycogen phosphorylase b; sHsp, small heat shock protein

On mechanism of antiarrhythmic action of some dimethylphenylacetamide derivatives

The study aim was to identify essential elements of the antiarrhythmic action mechanism of tertiary and quaternary derivatives of Dimethylphenylacetamide. The study was conducted in albino rats and mice of both sexes; isolated neurons of mollusc Limnea stagnalis; and strips of rats’ right ventricle myocardium. Two compounds of Dimethylphenylacetamide LKhT- 3-00 and LKhT-12-02 were studie

Stabilization of enzymes by dormancy autoinducers as a possible mechanism of resistance of resting microbial forms

Alkyl-substituted hydroxybenzenes (AHBs), autoinducers of microbial dormancy (or d1 factors), were found to stabilize the structure of protein macromolecules, making them metabolically less active and more resistant to stresses. In vitro experiments with the Bacillus intermedius ribonuclease and chymotrypsin showed that the degree of the physical and chemical stability of these enzymes treated with AHBs depends on their concentration and incubation time. Experiments with RNase, which is capable of refolding, i.e., renaturation after heat denaturation, revealed that AHBs efficiently interact with both intact and denatured proteins. The data obtained allow the inference to be made that d1 factors may play the role of natural chemical chaperons, blocking metabolism in dormant cells through the formation of catalytically inactive thermostable complexes with enzymes. © 2000 MAIK "Nauka/Interperiodica"

The role of microbial dormancy autoinducers in metabolism blockade

Alkyl-substituted hydroxybenzenes (AHBs), which are autoinducers of microbial dormancy (d1 factors), were found to stabilize the structure of protein macromolecules and modify the catalytic activity of enzymes. In vitro experiments showed that C6-AHB at concentrations from 10-4 to 10-2 M, at which it occurs in the medium as a true solution and a micellar colioid, respectively, nonspecifically inhibited the activity of chymotrypsin, RNase, invertase, and glucose oxidase. C6-AHB-induced conformational alterations in protein macromolecules were due to the formation of complexes, as evidenced by differences in the fluorescence spectra of individual RNase and C6-AHB and their mixtures and in the surface tension isotherms of C6-AHB and trypsin solutions. Data on the involvement of dormancy autoinducers in the posttranslational modification of enzymes and their inhibition will provide further insight into the mechanisms of development and maintenance of dormant microbial forms. © 2000 MAIK "Nauka/Interperiodica"

Multidimensional Conservation Laws: Overview, Problems, and Perspective

Some of recent important developments are overviewed, several longstanding open problems are discussed, and a perspective is presented for the mathematical theory of multidimensional conservation laws. Some basic features and phenomena of multidimensional hyperbolic conservation laws are revealed, and some samples of multidimensional systems/models and related important problems are presented and analyzed with emphasis on the prototypes that have been solved or may be expected to be solved rigorously at least for some cases. In particular, multidimensional steady supersonic problems and transonic problems, shock reflection-diffraction problems, and related effective nonlinear approaches are analyzed. A theory of divergence-measure vector fields and related analytical frameworks for the analysis of entropy solutions are discussed.Comment: 43 pages, 3 figure

the WAF method for non-homogeneous SWE with pollutant

This paper deals with the extension of the WAF method to discretize Shallow Water Equations with pollutants. We consider two different versions of the WAF method, by approximating the intermediate waves using the flux of HLL or the direct approach of HLLC solver. It is seen that both versions can be written under the same form with different definitions for the approximation of the velocity waves. We also propose an extension of the method to non-homogeneous systems. In the case of homogeneous systems it is seen that we can rewrite the third component of the numerical flux in terms of an intermediate wave speed approximation. We conclude that – in order to have the same relation for non-homogeneous systems – the approximation of the intermediate wave speed must be modified. The proposed extension of the WAF method preserves all stationary solutions, up to second order accuracy, and water at rest in an exact way, even with arbitrary pollutant concentration. Finally, we perform several numerical tests, by comparing it with HLLC solver, reference solutions and analytical solutions

A Lagrangian scheme for the solution of nonlinear diffusion equations using moving simplex meshes

A Lagrangian numerical scheme for solving nonlinear degenerate Fokker{Planck equations in space dimensions d>2 is presented. It applies to a large class of nonlinear diffusion equations, whose dynamics are driven by internal energies and given external potentials, e.g. the porous medium equation and the fast diffusion equation. The key ingredient in our approach is the gradient ow structure of the dynamics. For discretization of the Lagrangian map, we use a finite subspace of linear maps in space and a variational form of the implicit Euler method in time. Thanks to that time discretisation, the fully discrete solution inherits energy estimates from the original gradient ow, and these lead to weak compactness of the trajectories in the continuous limit. Consistency is analyzed in the planar situation, d = 2. A variety of numerical experiments for the porous medium equation indicates that the scheme is well-adapted to track the growth of the solution's support

Hysteretic Behavior of Proprotein Convertase 1/3 (PC1/3)

The proprotein convertases (PCs) are calcium-dependent proteases responsible for processing precursor proteins into their active forms in eukariotes. The PC1/3 is a pivotal enzyme of this family that participates in the proteolytic maturation of prohormones and neuropeptides inside the regulated secretory pathway. In this paper we demonstrate that mouse proprotein convertase 1/3 (mPC1/3) has a lag phase of activation by substrates that can be interpreted as a hysteretic behavior of the enzyme for their hydrolysis. This is an unprecedented observation in peptidases, but is frequent in regulatory enzymes with physiological relevance. The lag phase of mPC1/3 is dependent on substrate, calcium concentration and pH. This hysteretic behavior may have implications in the physiological processes in which PC1/3 participates and could be considered an additional control step in the peptide hormone maturation processes as for instance in the transformation of proinsulin to insulin