34 research outputs found

    Senior Thesis Project

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    Dance Senior Thesis

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    Effects of HDAC Inhibitors an neuronal and non-neuronal cells of a mice-modell of spinal muscular atrophy

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    Die Spinale Muskelatrophie (SMA) ist mit einer Inzidenz von 1:6000 die zweithäufigste autosomal-rezessive Erbkrankheit im frühen Kindesalter. Die durch den Verlust des SMN- (survival of motoneuron) Gens reduzierte SMN Protein Expression führt zu einer Degeneration der spinalen Motoneurone mit proximal betonter Muskelschwäche. Deshalb zielen erste Therapieversuche darauf ab, diese zu erhöhen. Es war gezeigt worden, dass durch den Einsatz von Histon Deacetylase Inhibitoren (HDAC) in neuronalen Kontroll Zellen und in nicht neuronalen Zellen von SMA Patienten die SMN Protein Expression signifikant gesteigert werden konnte. In der vorgelegten Arbeit wurde untersucht, ob die HDAC Inhibitoren Valproat, SAHA und FK228 Einfluss auf die SMN Protein Expression in kortikalen neuronalen Vorläuferzellen (NSC), auf primär embryonale Fibroblasten (PMEF) und auf die morphologischen Veränderungen in primär kultivierten embryonalen Motoneuronen eines Mausmodells der SMA haben. Es konnte eine signifikante Steigerung der SMN Protein Expression durch den Einsatz von Valproat und FK228 in kortikalen neuronalen Vorläuferzellen nachgewiesen werden. Es ergab sich jedoch kein Einfluss auf die SMN Protein Expression in primär embryonalen Fibroblasten. Bei NSCs und primär kultivierten embryonalen Motoneuronen wirkten die HDAC Inhibitoren Valproat und FK228 konzentrationsabhängig toxisch auf das Überleben, die Länge der Axone und die Größe der Wachstumskegel. Es konnte kein positiver Einfluss auf die morphologischen Veränderungen des Mausmodells gesehen werden. Zusammenfassend zeigte sich in der vorgelegten Arbeit ein positiver Effekt auf die SMN Protein Expression durch den Einsatz von HDAC Inhibitoren, der jedoch mit einem toxischen Effekt auf die behandelten neuronalen Zellen einherging.Spinal muscular atrophy (SMA) has an incidence of 1:6000 and is the second most common autosomal recessive hereditary disease in early childhood. The disease is characterized by the degeneration of spinal motor neurons with weakness of the proximal limb. This is caused by the deficiency of the SMN (survival of motor neuron) protein. Therefore therapeutical strategies aim to increase the SMN protein level. It has been shown that histone deacetylase inhibitors could increase SMN protein level in neuronal control cells and non-neuronal cells of SMA patients. The aim of the presented study was to investigate whether the HDAC inhibitors valproic acid, SAHA and FK228 had an effect on the SMN protein level in cortical neural progenitor cells or primary embryonic fibroblasts of a SMA mice model. The second question was if morphological pathologies in primary cultured embryonic motor neurons of this SMA mouse model could be altered. There was a significant increase in SMN protein level by the use of valproic acid and FK228 in cortical neuronal precursor cells. However, there was no effect on the SMN protein level in primary embryonic fibroblasts. In cortical neuronal precursor cells and primary cultured embryonic motor neurons, the HDAC inhibitors valproic acid and FK228 displayed and concentration-dependent toxic effect on the survival, axonal length and the size of the growth cone. No obvious influence on the morphological changes in the mice model could be seen. In conclusion a positive effect on the SMN protein level by the use of HDAC inhibitors could be detected, but with a toxic effect on neuronal cells at the same time

    Spatio-temporal distribution of tubulin-binding cofactors and posttranslational modifications of tubulin in the cochlea of mice

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    The five tubulin-binding cofactors (TBC) are involved in tubulin synthesis and the formation of microtubules. Their importance is highlighted by various diseases and syndromes caused by dysfunction or mutation of these proteins. Posttranslational modifications (PTMs) of tubulin promote different characteristics, including stability-creating subpopulations of tubulin. Cell- and time-specific distribution of PTMs has only been investigated in the organ of Corti in gerbils. The aim of the presented study was to investigate the cell type-specific and time-specific expression patterns of TBC proteins and PTMs for the first time in murine cochleae over several developmental stages. For this, murine cochleae were investigated at the postnatal (P) age P1, P7 and P14 by immunofluorescence analysis. The investigations revealed several profound interspecies differences in the distribution of PTMs between gerbil and mouse. Furthermore, this is the first study to describe the spatio-temporal distribution of TBCs in any tissue ever showing a volatile pattern of expression. The expression analysis of TBC proteins and PTMs of tubulin reveals that these proteins play a role in the physiological development of the cochlea and might be essential for hearing

    Neurogenic stem cell niche in the auditory Thalamus: in vitro evidence of neural stem cells in the rat medial geniculate body

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    The medial geniculate body (MGB) is a nucleus of the diencephalon representing a relevant segment of the auditory pathway and is part of the metathalamus. It receives afferent information via the inferior brachium of the inferior colliculus and transmits efferent fibers via acoustic radiations to the auditory cortex. Neural stem cells (NSCs) have been detected in certain areas along the auditory pathway. They are of great importance as the induction of an adult stem cell niche might open a regenerative approach to a causal treatment of hearing disorders. Up to now, the existence of NSCs in the MGB has not been determined. Therefore, this study investigated whether the MGB has a neural stem cell potential. For this purpose, cells were extracted from the MGB of PND 8 Sprague-Dawley rats and cultured in a free-floating cell culture assay, which showed mitotic activity and positive staining for stem cell and progenitor markers. In differentiation assays, the markers β-III-tubulin, GFAP, and MBP demonstrated the capacity of single cells to differentiate into neuronal and glial cells. In conclusion, cells from the MGB exhibited the cardinal features of NSCs: self-renewal, the formation of progenitor cells, and differentiation into all neuronal lineage cells. These findings may contribute to a better understanding of the development of the auditory pathway

    Evaluation of the Neurogenic Potential in the Rat Inferior Colliculus from Early Postnatal Days Until Adulthood

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    Neural stem cells (NSCs) have been recently identified in the inferior colliculus (IC). These cells are of particular interest, as no casual therapeutic options for impaired neural structures exist. This research project aims to evaluate the neurogenic potential in the rat IC from early postnatal days until adulthood. The IC of rats from postnatal day 6 up to 48 was examined by neurosphere assays and histological sections. In free-floating IC cell cultures, neurospheres formed from animals from early postnatal to adulthood. The amount of generated neurospheres decreased in older ages and increased with the number of cell line passages. Cells in the neurospheres and the histological sections stained positively with NSC markers (Doublecortin, Sox-2, Musashi-1, Nestin, and Atoh1). Dissociated single cells from the neurospheres differentiated and were stained positively for the neural lineage markers β-III-tubulin, glial fibrillary acidic protein, and myelin basic protein. In addition, NSC markers (Doublecortin, Sox-2, CDK5R1, and Ascl-1) were investigated by qRT-PCR. In conclusion, a neurogenic potential in the rat IC was detected and evaluated from early postnatal days until adulthood. The identification of NSCs in the rat IC and their age-specific characteristics contribute to a better understanding of the development and the plasticity of the auditory pathway and might be activated for therapeutic use

    Spontaneous Calcium Oscillations through Differentiation: A Calcium Imaging Analysis of Rat Cochlear Nucleus Neural Stem Cells

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    Causal therapies for the auditory-pathway and inner-ear diseases are still not yet available for clinical application. Regenerative medicine approaches are discussed and examined as possible therapy options. Neural stem cells could play a role in the regeneration of the auditory pathway. In recent years, neural stem and progenitor cells have been identified in the cochlear nucleus, the second nucleus of the auditory pathway. The current investigation aimed to analyze cell maturation concerning cellular calcium activity. Cochlear nuclei from PND9 CD rats were microscopically dissected and propagated as neurospheres in free-floating cultures in stem-cell medium (Neurobasal, B27, GlutaMAX, EGF, bFGF). After 30 days, the dissociation and plating of these cells took place under withdrawal of the growth factors and the addition of retinoic acid, which induces neural cell differentiation. Calcium imaging analysis with BAPTA-1/Oregon Green was carried out at different times during the differentiation phase. In addition, the influence of different voltage-dependent calcium channels was analyzed through the targeted application of inhibitors of the L-, N-, R- and T-type calcium channels. For this purpose, comparative examinations were performed on CN NSCs, and primary CN neurons. As the cells differentiated, a significant increase in spontaneous neuronal calcium activity was demonstrated. In the differentiation stage, specific frequencies of the spontaneous calcium oscillations were measured in different regions of the individual cells. Initially, the highest frequency of spontaneous calcium oscillations was ascertainable in the maturing somata. Over time, these were overtaken by calcium oscillations in the axons and dendrites. Additionally, in the area of the growth cones, an increasing activity was determined. By inhibiting voltage-dependent calcium channels, their expression and function in the differentiation process were confirmed. A comparable pattern of maturation of these channels was found in CN NSCs and primary CN neurons. The present results show that neural stem cells of the rat cochlear nucleus differentiated not only morphologically but also functionally. Spontaneous calcium activities are of great relevance in terms of neurogenesis and integration into existing neuronal structures. These functional aspects of neurogenesis within the auditory pathway could serve as future targets for the exogenous control of neuronal regeneration

    Medical Apps in Oto-Rhino-Laryngology

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    Rak K, Völker J, Taeger J, Bahmer A, Hagen R, Albrecht U-V. Medizinische Apps in der HNO-Heilkunde. Laryngo-Rhino-Otologie. 2019;98(S 01):S253-S289.Die Nutzung mobiler Informations- und Kommunikationstechnologie im Kontext medizinscher und gesundheitsnaher Dienstleistungen, z. B. in Form von Apps, gewinnt, leider jedoch häufig unter Missachtung notwendiger Qualitätskriterien, immer mehr an Bedeutung. So erscheint es wichtig, dass neben einer die Anwendungssoftware kontrollierenden Instanz möglichst hoch qualifizierte Akteure des Gesundheitswesens bei der Erstellung mitwirken. Schon aus Haftungsgründen muss der beratende Arzt eine hohe Sorgfalt bei der Auswahl und Empfehlung einer App walten lassen, gerade auch in Anbetracht der Tatsache, dass nur wenige Apps als Medizinprodukt zertifiziert sind. Auf dem Markt gibt es eine große Anzahl an medizinischen Apps, wobei nur ein geringer Anteil dieser auf den Fachbereich HNO-Heilkunde entfällt. Prozentual sind die Teilbereiche Audiologie, Schlafmedizin und Allergologie am häufigsten vertreten. Obwohl sich der Fachbereich der HNO-Heilkunde zunehmend mit dieser Thematik wissenschaftlich auseinandersetzt, fehlt, wie generell bei vielen medizinischen Apps, eine wissenschaftliche Evidenz der Inhalte und Ergebnisse. Es gibt jedoch für Anwender weitere Möglichkeiten, medizinische Apps nach definierten Qualitätskriterien in verschiedenen Kategorien, wie z. B. Funktionalität, Wissenschaftlichkeit, aber auch Datenschutz, zu beurteilen. Keine der mittels eines solchen Bewertungstools evaluierten Apps erfüllte alle geforderten Kriterien, dem Anwender steht jedoch hiermit ein Instrument zur besseren Einschätzung der Anwendungssoftware zur Verfügung. Im Rahmen des Entwicklungsprozesses einer medizinischen App für den HNO-Bereich war es jedoch möglich, die Qualitätskriterien zu berücksichtigen. Zusammenfassend soll die vorliegende Arbeit einen Überblick über Thema „Apps in der HNO-Heilkunde“ ermöglichen mit dem Ziel, dieses moderne Hilfsmittel nutzbringend einsetzen zu können

    Towards fully automated inner ear analysis with deep-learning-based joint segmentation and landmark detection framework

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    Abstract Automated analysis of the inner ear anatomy in radiological data instead of time-consuming manual assessment is a worthwhile goal that could facilitate preoperative planning and clinical research. We propose a framework encompassing joint semantic segmentation of the inner ear and anatomical landmark detection of helicotrema, oval and round window. A fully automated pipeline with a single, dual-headed volumetric 3D U-Net was implemented, trained and evaluated using manually labeled in-house datasets from cadaveric specimen ( N=43N=43 N = 43 ) and clinical practice ( N=9N=9 N = 9 ). The model robustness was further evaluated on three independent open-source datasets ( N=23+7+17N = 23{} + 7{} + 17 N = 23 + 7 + 17 scans) consisting of cadaveric specimen scans. For the in-house datasets, Dice scores of 0.97 and 0.94\text{0.97 and 0.94} 0.97 and 0.94 , intersection-over-union scores of 0.94 and 0.89\text{0.94 and 0.89} 0.94 and 0.89 and average Hausdorff distances of 0.0650.065{} 0.065 and 0.140.14{} 0.14 voxel units were achieved. The landmark localization task was performed automatically with an average localization error of 3.3 and 5.2\text{3.3 and 5.2} 3.3 and 5.2 voxel units. A robust, albeit reduced performance could be attained for the catalogue of three open-source datasets. Results of the ablation studies with 43 mono-parametric variations of the basal architecture and training protocol provided task-optimal parameters for both categories. Ablation studies against single-task variants of the basal architecture showed a clear performance benefit of coupling landmark localization with segmentation and a dataset-dependent performance impact on segmentation ability

    Medical Apps in Oto-Rhino-Laryngology

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    The implementation of mobile information and communication technology in the field of health services, e.g. in the form of apps, is becoming increasingly important. Unfortunately, the necessary quality criteria are often mising. Thus, it seems important, that in addition to an app controlling authority highly qualified health care professionals participate in the development of these applications. For reasons of liability, however, the physician must exercise great caution in the selection and recommendation of medical apps, especially considering, that only a few apps are certified as medical devices. There are a large number of medical apps on the market, with only a small proportion being assigned to the field of otorhinolaryngology. The areas of audiology, sleep medicine and allergology are most frequently represented. Althouhgh there is increasing scientific work on this topic in the field of otorhinolaryngology, there is a lack of scientific evidence of contents and results, as is generally the case of medical apps. However, there are other possibilities for users to rate medical apps regarding defined qualitiy criteria such as functionality, scientific integrity, but also data privacy. None of the apps assessed by such a evaluation tool met all the required quality criteria, but the applied instrument helped to better assess the application. However, it was possible to consider the quality criteria in the developmental process of an medical app for the field of otorhinolaryngoglogy. In summary, the present work provide a comprehensive insight into the topic "Apps in Otorhinolaryngology" with the aim to use these modern aids in a beneficial way.Die Nutzung mobiler Informations- und Kommunikationstechnologie im Kontext medizinscher und gesundheitsnaher Dienstleistungen, z. B. in Form von Apps, gewinnt, leider jedoch häufig unter Missachtung notwendiger Qualitätskriterien, immer mehr an Bedeutung. So erscheint es wichtig, dass neben einer die Anwendungssoftware kontrollierenden Instanz möglichst hoch qualifizierte Akteure des Gesundheitswesens bei der Erstellung mitwirken. Schon aus Haftungsgründen muss der beratende Arzt eine hohe Sorgfalt bei der Auswahl und Empfehlung einer App walten lassen, gerade auch in Anbetracht der Tatsache, dass nur wenige Apps als Medizinprodukt zertifiziert sind. Auf dem Markt gibt es eine große Anzahl an medizinischen Apps, wobei nur ein geringer Anteil dieser auf den Fachbereich HNO-Heilkunde entfällt. Prozentual sind die Teilbereiche Audiologie, Schlafmedizin und Allergologie am häufigsten vertreten. Obwohl sich der Fachbereich der HNO-Heilkunde zunehmend mit dieser Thematik wissenschaftlich auseinandersetzt, fehlt, wie generell bei vielen medizinischen Apps, eine wissenschaftliche Evidenz der Inhalte und Ergebnisse. Es gibt jedoch für Anwender weitere Möglichkeiten, medizinische Apps nach definierten Qualitätskriterien in verschiedenen Kategorien, wie z. B. Funktionalität, Wissenschaftlichkeit, aber auch Datenschutz, zu beurteilen. Keine der mittels eines solchen Bewertungstools evaluierten Apps erfüllte alle geforderten Kriterien, dem Anwender steht jedoch hiermit ein Instrument zur besseren Einschätzung der Anwendungssoftware zur Verfügung. Im Rahmen des Entwicklungsprozesses einer medizinischen App für den HNO-Bereich war es jedoch möglich, die Qualitätskriterien zu berücksichtigen. Zusammenfassend soll die vorliegende Arbeit einen Überblick über Thema „Apps in der HNO-Heilkunde“ ermöglichen mit dem Ziel, dieses moderne Hilfsmittel nutzbringend einsetzen zu können
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