45 research outputs found
The Role of Electrostatic Interactions in Complex Formation between Bacterial Luciferase and NADPH:FMN-oxidoreductase
A possible mechanism of complex formation between bacterial luciferase and NADPH:FMNoxidoreductase from Vibrio harveyi sustained by electrostatic forces is studied. The complex between the enzymes is important for a direct FMNH2 transfer without a contact with solvent, which could cause a rapid autooxidation and the formation of reactive oxygen species. In the current work the diversity of possible relative positions of NADPH:FMN-oxidoreductase and luciferase was obtained with Monte-Carlo sampling governed by oxidoreductase internal charged groups and electrostatic field caused by luciferase. Among the structures with the minimal energies, the one was found that has a proper active sites orientation for a direct FMNH2 transfer. Possible role of hydrogen bonding between Arg291 and Gln197 of luciferase and oxidoreductase, respectively, in stabilization of this complex is propose
Bioluminescent enzyme inhibition based assay of metal nanoparticles
Copia digital. Madrid : Ministerio de Cultura. SubdirecciΓ³n General de CoordinaciΓ³n Bibliotecaria, 200
Bioluminescent enzyme inhibition-based assay to predict the potential toxicity of carbon nanomaterials
Applications of luminous bacteria enzymes in toxicology
This review describes the principle and applications of bioluminescent enzymatic toxicity bioassays. This type of assays uses bacterial coupled enzyme systems: NADH:FMN-oxidoreductase and luciferase to replace living organisms in developing cost-competitive biosensors for environmental, medical and industrial applications. These biosensors instantly signal chemical and
biological hazards and allow for detecting a great amount of toxic compounds with advantages associated with fast results, high sensitivity, simplicity, low cost and safety of the procedure
Functional divergence between evolutionary related LuxG and Fre oxidoreductases of luminous bacteria
In luminous bacteria NAD(P)H:flavin-oxidoreductases LuxG and Fre there are homologous enzymes that could provide a luciferase with reduced flavin. While Fre functions as a housekeeping enzyme, LuxG appears to be a source of reduced flavin for bioluminescence as it is transcribed together with luciferase. This study is aimed at providing the basic conception of Fre and LuxG evolution and revealing the peculiarities of the active site structure resulted from a functional variation within the oxidoreductase family. A phylogenetic analysis has demonstrated that Fre and LuxG oxidoreductases have evolved separately after the gene duplication event, and consequently, they have acquired changes in the conservation of functionally related sites. Namely, different evolutionary rates have been observed at the site responsible for specificity to flavin substrate (Arg 46). Also Tyr 72 forming a part of a mobile loop involved into FAD binding has been found to be conserved among Fre in contrast to LuxG oxidoreductases. The conservation of different amino acid types in NAD(P)H binding site has been defined for Fre (arginine) and LuxG (proline) oxidoreductases
Applications of luminous bacteria enzymes in toxicology
This review describes the principle and applications of bioluminescent enzymatic toxicity bioassays. This type of assays uses bacterial coupled enzyme systems: NADH:FMN-oxidoreductase and luciferase to replace living organisms in developing cost-competitive biosensors for environmental, medical and industrial applications. These biosensors instantly signal chemical and
biological hazards and allow for detecting a great amount of toxic compounds with advantages associated with fast results, high sensitivity, simplicity, low cost and safety of the procedure
The Role of Electrostatic Interactions in Complex Formation between Bacterial Luciferase and NADPH:FMN-oxidoreductase
ΠΠ΅ΡΠΎΠ΄ΠΎΠΌ ΠΌΠΎΠ»Π΅ΠΊΡΠ»ΡΡΠ½ΠΎΠ³ΠΎ Π΄ΠΎΠΊΠΈΠ½Π³Π° ΠΈΡΡΠ»Π΅Π΄ΠΎΠ²Π°Π½ Π²ΠΎΠ·ΠΌΠΎΠΆΠ½ΡΠΉ ΠΌΠ΅Ρ
Π°Π½ΠΈΠ·ΠΌ ΡΠΎΡΠΌΠΈΡΠΎΠ²Π°Π½ΠΈΡ Π±Π΅Π»ΠΊΠΎΠ²ΠΎΠ³ΠΎ
ΠΊΠΎΠΌΠΏΠ»Π΅ΠΊΡΠ° ΠΌΠ΅ΠΆΠ΄Ρ Π±Π°ΠΊΡΠ΅ΡΠΈΠ°Π»ΡΠ½ΠΎΠΉ Π»ΡΡΠΈΡΠ΅ΡΠ°Π·ΠΎΠΉ ΠΈ NADPH:FMN-ΠΎΠΊΡΠΈΠ΄ΠΎΡΠ΅Π΄ΡΠΊΡΠ°Π·ΠΎΠΉ ΠΈΠ· Vibrio
harveyi Π·Π° ΡΡΠ΅Ρ ΡΠ»Π΅ΠΊΡΡΠΎΡΡΠ°ΡΠΈΡΠ΅ΡΠΊΠΈΡ
Π²Π·Π°ΠΈΠΌΠΎΠ΄Π΅ΠΉΡΡΠ²ΠΈΠΉ. ΠΠΎΠΌΠΏΠ»Π΅ΠΊΡ ΠΌΠ΅ΠΆΠ΄Ρ ΠΈΡΡΠ»Π΅Π΄ΡΠ΅ΠΌΡΠΌΠΈ
ΡΠ΅ΡΠΌΠ΅Π½ΡΠ°ΠΌΠΈ Π½Π΅ΠΎΠ±Ρ
ΠΎΠ΄ΠΈΠΌ Π΄Π»Ρ ΠΏΠ΅ΡΠ΅Π΄Π°ΡΠΈ Π»ΡΡΠΈΡΠ΅ΡΠ°Π·Π΅ ΡΡΠ±ΡΡΡΠ°ΡΠ° β ΠΌΠΎΠ»Π΅ΠΊΡΠ»Ρ FMNH2, ΠΊΠΎΡΠΎΡΠ°Ρ
ΠΏΠΎΠ΄Π²Π΅ΡΠΆΠ΅Π½Π° Π±ΡΡΡΡΠΎΠΌΡ Π°Π²ΡΠΎΠΎΠΊΠΈΡΠ»Π΅Π½ΠΈΡ Ρ ΠΎΠ±ΡΠ°Π·ΠΎΠ²Π°Π½ΠΈΠ΅ΠΌ Π°ΠΊΡΠΈΠ²Π½ΡΡ
ΡΠΎΡΠΌ ΠΊΠΈΡΠ»ΠΎΡΠΎΠ΄Π° ΠΏΡΠΈ ΠΊΠΎΠ½ΡΠ°ΠΊΡΠ΅
Ρ Π²Π½ΡΡΡΠΈΠΊΠ»Π΅ΡΠΎΡΠ½ΡΠΌ ΡΠ°ΡΡΠ²ΠΎΡΠΈΡΠ΅Π»Π΅ΠΌ. Π Π½Π°ΡΡΠΎΡΡΠ΅ΠΉ ΡΠ°Π±ΠΎΡΠ΅ Ρ ΠΏΠΎΠΌΠΎΡΡΡ ΠΌΠ΅ΡΠΎΠ΄Π° ΠΠΎΠ½ΡΠ΅-
ΠΠ°ΡΠ»ΠΎ Π±ΡΠ»ΠΎ ΠΏΠΎΠ»ΡΡΠ΅Π½ΠΎ ΠΌΠ½ΠΎΠ³ΠΎΠΎΠ±ΡΠ°Π·ΠΈΠ΅ Π²ΠΎΠ·ΠΌΠΎΠΆΠ½ΡΡ
ΠΏΠΎΠ»ΠΎΠΆΠ΅Π½ΠΈΠΉ NADPH:FMN-ΠΎΠΊΡΠΈΠ΄ΠΎΡΠ΅Π΄ΡΠΊΡΠ°Π·Ρ
ΠΎΡΠ½ΠΎΡΠΈΡΠ΅Π»ΡΠ½ΠΎ Π»ΡΡΠΈΡΠ΅ΡΠ°Π·Ρ Ρ ΡΡΠ΅ΡΠΎΠΌ ΠΏΠΎΡΠ΅Π½ΡΠΈΠ°Π»Π° ΡΠ»Π΅ΠΊΡΡΠΎΡΡΠ°ΡΠΈΡΠ΅ΡΠΊΠΎΠ³ΠΎ ΠΏΠΎΠ»Ρ, ΡΠΎΠ·Π΄Π°Π²Π°Π΅ΠΌΠΎΠ³ΠΎ
Π»ΡΡΠΈΡΠ΅ΡΠ°Π·ΠΎΠΉ. ΠΠΎΠΊΠ°Π·Π°Π½ΠΎ, ΡΡΠΎ ΡΡΠ΅Π΄ΠΈ ΡΡΡΡΠΊΡΡΡ Ρ Π½Π°ΠΈΠΌΠ΅Π½ΡΡΠ΅ΠΉ ΡΠ½Π΅ΡΠ³ΠΈΠ΅ΠΉ Π²Π·Π°ΠΈΠΌΠΎΠ΄Π΅ΠΉΡΡΠ²ΠΈΡ ΠΈΠΌΠ΅Π΅ΡΡΡ
ΠΊΠΎΠΌΠΏΠ»Π΅ΠΊΡ, Π² ΠΊΠΎΡΠΎΡΠΎΠΌ ΠΎΡΠΈΠ΅Π½ΡΠ°ΡΠΈΡ Π°ΠΊΡΠΈΠ²Π½ΡΡ
ΡΠ΅Π½ΡΡΠΎΠ² ΠΎΠ±ΠΎΠΈΡ
ΡΠ΅ΡΠΌΠ΅Π½ΡΠΎΠ² ΡΠΏΠΎΡΠΎΠ±ΡΡΠ²ΡΠ΅Ρ ΠΏΡΡΠΌΠΎΠΉ
ΠΏΠ΅ΡΠ΅Π΄Π°ΡΠ΅ ΡΠ»Π°Π²ΠΈΠ½Π°. ΠΡΡΠΊΠ°Π·Π°Π½ΠΎ ΠΏΡΠ΅Π΄ΠΏΠΎΠ»ΠΎΠΆΠ΅Π½ΠΈΠ΅ ΠΎ ΡΠΎΠ»ΠΈ Π²ΠΎΠ΄ΠΎΡΠΎΠ΄Π½ΠΎΠΉ ΡΠ²ΡΠ·ΠΈ ΠΌΠ΅ΠΆΠ΄Ρ Arg291 ΠΈ Gln197
Π»ΡΡΠΈΡΠ΅ΡΠ°Π·Ρ ΠΈ ΠΎΠΊΡΠΈΠ΄ΠΎΡΠ΅Π΄ΡΠΊΡΠ°Π·Ρ ΡΠΎΠΎΡΠ²Π΅ΡΡΡΠ²Π΅Π½Π½ΠΎ Π² ΡΡΠ°Π±ΠΈΠ»ΠΈΠ·Π°ΡΠΈΠΈ ΠΊΠΎΠΌΠΏΠ»Π΅ΠΊΡΠ° ΠΌΠ΅ΠΆΠ΄Ρ Π±Π΅Π»ΠΊΠ°ΠΌΠΈA possible mechanism of complex formation between bacterial luciferase and NADPH:FMNoxidoreductase
from Vibrio harveyi sustained by electrostatic forces is studied. The complex between
the enzymes is important for a direct FMNH2 transfer without a contact with solvent, which could
cause a rapid autooxidation and the formation of reactive oxygen species. In the current work the
diversity of possible relative positions of NADPH:FMN-oxidoreductase and luciferase was obtained
with Monte-Carlo sampling governed by oxidoreductase internal charged groups and electrostatic
field caused by luciferase. Among the structures with the minimal energies, the one was found that
has a proper active sites orientation for a direct FMNH2 transfer. Possible role of hydrogen bonding
between Arg291 and Gln197 of luciferase and oxidoreductase, respectively, in stabilization of this
complex is propose
NAD(P)H:FMN-oxidoreductase functioning under macromolecular crowding: in vitro modeling
Π’Π΅ΠΊΡΡ ΡΡΠ°ΡΡΠΈ Π½Π΅ ΠΏΡΠ±Π»ΠΈΠΊΡΠ΅ΡΡΡ Π² ΠΎΡΠΊΡΡΡΠΎΠΌ Π΄ΠΎΡΡΡΠΏΠ΅ Π² ΡΠΎΠΎΡΠ²Π΅ΡΡΡΠ²ΠΈΠΈ Ρ ΠΏΠΎΠ»ΠΈΡΠΈΠΊΠΎΠΉ ΠΆΡΡΠ½Π°Π»Π°
Impact of enzyme stabilizers on the characteristics of biomodules for bioluminescent biosensors
Π’Π΅ΠΊΡΡ ΡΡΠ°ΡΡΠΈ Π½Π΅ ΠΏΡΠ±Π»ΠΈΠΊΡΠ΅ΡΡΡ Π² ΠΎΡΠΊΡΡΡΠΎΠΌ Π΄ΠΎΡΡΡΠΏΠ΅ Π² ΡΠΎΠΎΡΠ²Π΅ΡΡΡΠ²ΠΈΠΈ Ρ ΠΏΠΎΠ»ΠΈΡΠΈΠΊΠΎΠΉ ΠΆΡΡΠ½Π°Π»Π°.The biomodule of bioluminescent biosensor based on a coupled enzyme system NADH:FMN-oxidoreductase and luciferase, co-immobilized with substrates in dried starch or gelatin gels, has been developed. We studied the impact of several stabilizers-dithiothreitol (DTT), bovine serum albumin (BSA) and mercaptoethanol (ME) on the biomodule's activity, storage stability and sensitivity to toxic substances. The inclusion of stabilizers increases the activity of the biological module by more than 150%. To achieve the combination of high activity, prolonged storage time and acute sensitivity to toxic substances within maximum permissible concentration we used starch gel as a carrier adding 100 mu M DTT to the immobilized preparation. The gelatin-based biological module had greater storage stability than the starch-based one but demonstrated less sensitivity to toxic substances. (C) 2015 Elsevier B.V. All rights reserved
ΠΠΈΠΎΠ»ΡΠΌΠΈΠ½Π΅ΡΡΠ΅Π½ΡΠ½ΡΠΉ ΡΠ΅ΡΠΌΠ΅Π½ΡΠ°ΡΠΈΠ²Π½ΡΠΉ ΠΈΠ½Π³ΠΈΠ±ΠΈΡΠΎΡΠ½ΡΠΉ Π°Π½Π°Π»ΠΈΠ· Π½Π°Π½ΠΎΡΠ°ΡΡΠΈΡ Π½Π° ΠΎΡΠ½ΠΎΠ²Π΅ ΠΌΠ΅ΡΠ°Π»Π»ΠΎΠ²
The bioluminescent enzymatic bioassays for assessment of nanomaterial biotoxicity using the soluble or immobilized coupled enzyme system of luminous bacteria NAD(P)Π:FMN-oxidoreductase + luciferase (Red + Luc) as a test system were employed in this study. This method specifically detects the toxic properties of substances based on their effect on the parameters of the bioluminescent enzyme reactions. The commercially available metal nanoparticles (MNPs), including silver nanoparticles (Ag), nanoparticles of silicon dioxide (SiO2), and titanium dioxide (TiO2), of different sizes were tested in the study. The inhibitory effects of MNPs on the bioluminescent Red + Luc enzyme system were measured. Results indicated that the soluble Red + Luc coupled enzyme system was more sensitive to the inhibition effect of MNPs than its immobilized form. The inhibitory activity of MNPs decreased in the following order: Ag > TiO2 > SiO2. That correlated well with results of other biological methods. Due to substantial advantages such as technical simplicity, short response time and high sensitivity to analysis, this bioluminescent enzymatic bioassay has the potential to be developed as a general bioassay for safety assessment of a wide variety of nanomaterialsΠΡΠ΅Π΄Π»ΠΎΠΆΠ΅Π½ ΠΌΠ΅ΡΠΎΠ΄ ΠΎΡΠ΅Π½ΠΊΠΈ Π±ΠΈΠΎΡΠΎΠΊΡΠΈΡΠ½ΠΎΡΡΠΈ Π½Π°Π½ΠΎΠΌΠ°ΡΠ΅ΡΠΈΠ°Π»ΠΎΠ², ΠΎΡΠ½ΠΎΠ²Π°Π½Π½ΡΠΉ Π½Π° ΠΈΡΠΏΠΎΠ»ΡΠ·ΠΎΠ²Π°Π½ΠΈΠΈ Π² ΠΊΠ°ΡΠ΅ΡΡΠ²Π΅ ΠΎΠ±ΡΠ΅ΠΊΡΠ° Π²ΠΎΠ·Π΄Π΅ΠΉΡΡΠ²ΠΈΡ ΡΠ°ΡΡΠ²ΠΎΡΠΈΠΌΠΎΠΉ ΠΈ ΠΈΠΌΠΌΠΎΠ±ΠΈΠ»ΠΈΠ·ΠΎΠ²Π°Π½Π½ΠΎΠΉ Π±ΠΈΠΎΠ»ΡΠΌΠΈΠ½Π΅ΡΡΠ΅Π½ΡΠ½ΠΎΠΉ Π±ΠΈΡΠ΅ΡΠΌΠ΅Π½ΡΠ½ΠΎΠΉ ΡΠΈΡΡΠ΅ΠΌΡ: ΠΠΠ(Π€)Β·Π:Π€ΠΠ-ΠΎΠΊΡΠΈΠ΄ΠΎΡΠ΅Π΄ΡΠΊΡΠ°Π·Π° ΠΈ Π»ΡΡΠΈΡΠ΅ΡΠ°Π·Π°. ΠΡΠΈΠ½ΡΠΈΠΏ ΠΌΠ΅ΡΠΎΠ΄Π° ΡΠΎΡΡΠΎΠΈΡ Π² ΠΎΠ±Π½Π°ΡΡΠΆΠ΅Π½ΠΈΠΈ ΡΠΎΠΊΡΠΈΡΠ΅ΡΠΊΠΈΡ
ΡΠ²ΠΎΠΉΡΡΠ² ΡΠ΅ΡΡΠΈΡΡΠ΅ΠΌΡΡ
Π²Π΅ΡΠ΅ΡΡΠ² ΠΏΠΎ ΠΈΡ
Π²Π»ΠΈΡΠ½ΠΈΡ Π½Π° ΠΏΠ°ΡΠ°ΠΌΠ΅ΡΡΡ Π±ΠΈΠΎΠ»ΡΠΌΠΈΠ½Π΅ΡΡΠ΅Π½ΡΠΈΠΈ ΠΈΡΠΏΠΎΠ»ΡΠ·ΡΠ΅ΠΌΠΎΠΉ Π±ΠΈΡΠ΅ΡΠΌΠ΅Π½ΡΠ½ΠΎΠΉ ΡΠΈΡΡΠ΅ΠΌΡ. ΠΡΠΎΠ²Π΅Π΄Π΅Π½ΠΎ ΡΠ΅ΡΡΠΈΡΠΎΠ²Π°Π½ΠΈΠ΅ ΠΊΠΎΠΌΠΌΠ΅ΡΡΠ΅ΡΠΊΠΈ Π΄ΠΎΡΡΡΠΏΠ½ΡΡ
Π½Π°Π½ΠΎΡΠ°ΡΡΠΈΡ Π½Π° ΠΎΡΠ½ΠΎΠ²Π΅ ΠΌΠ΅ΡΠ°Π»Π»ΠΎΠ² (ΠΠΠ§), Π² ΡΠΎΠΌ ΡΠΈΡΠ»Π΅ Π½Π°Π½ΠΎΡΠ°ΡΡΠΈΡ ΡΠ΅ΡΠ΅Π±ΡΠ° (Ag), ΠΈ ΡΠ°Π·Π»ΠΈΡΠ°ΡΡΠΈΡ
ΡΡ ΠΏΠΎ ΡΠ°Π·ΠΌΠ΅ΡΡ Π½Π°Π½ΠΎΡΠ°ΡΡΠΈΡ Π΄ΠΈΠΎΠΊΡΠΈΠ΄ΠΎΠ² ΠΊΡΠ΅ΠΌΠ½ΠΈΡ (SiO2) ΠΈ ΡΠΈΡΠ°Π½Π° (TiO2). ΠΡΠΈ ΠΠΠ§ ΠΎΠΊΠ°Π·ΡΠ²Π°ΡΡ ΠΈΠ½Π³ΠΈΠ±ΠΈΡΡΡΡΠΈΠΉ ΡΡΡΠ΅ΠΊΡ Π½Π° Π°ΠΊΡΠΈΠ²Π½ΠΎΡΡΡ Π±ΠΈΡΠ΅ΡΠΌΠ΅Π½ΡΠ½ΠΎΠΉ ΡΠΈΡΡΠ΅ΠΌΡ, ΠΏΡΠΈΡΠ΅ΠΌ ΡΠ°ΡΡΠ²ΠΎΡΠΈΠΌΡΠ΅ ΡΠ΅ΡΠΌΠ΅Π½ΡΡ Π² Π±ΠΎΠ»ΡΡΠ΅ΠΉ ΡΡΠ΅ΠΏΠ΅Π½ΠΈ ΠΏΠΎΠ΄Π²Π΅ΡΠΆΠ΅Π½Ρ ΠΈΠ½Π³ΠΈΠ±ΠΈΡΡΡΡΠ΅ΠΌΡ Π²ΠΎΠ·Π΄Π΅ΠΉΡΡΠ²ΠΈΡ ΠΠΠ§ ΠΏΠΎ ΡΡΠ°Π²Π½Π΅Π½ΠΈΡ Ρ ΠΈΠΌΠΌΠΎΠ±ΠΈΠ»ΠΈΠ·ΠΎΠ²Π°Π½Π½ΡΠΌΠΈ. Π‘ΡΠ΅ΠΏΠ΅Π½Ρ ΠΈΠ½Π³ΠΈΠ±ΠΈΡΡΡΡΠ΅Π³ΠΎ Π²ΠΎΠ·Π΄Π΅ΠΉΡΡΠ²ΠΈΡ ΡΠΌΠ΅Π½ΡΡΠ°Π΅ΡΡΡ Π² ΡΡΠ΄Ρ Ag > TiO2 > SiO2, ΡΡΠΎ ΡΠΎΠ³Π»Π°ΡΡΠ΅ΡΡΡ Ρ ΡΠ΅Π·ΡΠ»ΡΡΠ°ΡΠ°ΠΌΠΈ Π΄ΡΡΠ³ΠΈΡ
Π±ΠΈΠΎΠ»ΠΎΠ³ΠΈΡΠ΅ΡΠΊΠΈΡ
ΠΌΠ΅ΡΠΎΠ΄ΠΎΠ². ΠΠΈΠΎΠ»ΡΠΌΠΈΠ½Π΅ΡΡΠ΅Π½ΡΠ½ΡΠΉ ΡΠ΅ΡΠΌΠ΅Π½ΡΠ°ΡΠΈΠ²Π½ΡΠΉ ΠΌΠ΅ΡΠΎΠ΄ Π°Π½Π°Π»ΠΈΠ·Π° Π·Π°Π½ΠΈΠΌΠ°Π΅Ρ 2-3 ΠΌΠΈΠ½, ΠΎΡΠ»ΠΈΡΠ°Π΅ΡΡΡ Π²ΡΡΠΎΠΊΠΎΠΉ ΡΡΠ²ΡΡΠ²ΠΈΡΠ΅Π»ΡΠ½ΠΎΡΡΡΡ, ΡΠ΅Ρ
Π½ΠΈΡΠ΅ΡΠΊΠΎΠΉ ΠΏΡΠΎΡΡΠΎΡΠΎΠΉ ΠΈ ΠΌΠΎΠΆΠ΅Ρ ΠΈΡΠΏΠΎΠ»ΡΠ·ΠΎΠ²Π°ΡΡΡΡ Π΄Π»Ρ ΠΎΡΠ΅Π½ΠΊΠΈ Π±Π΅Π·ΠΎΠΏΠ°ΡΠ½ΠΎΡΡΠΈ ΡΠ°Π·Π»ΠΈΡΠ½ΡΡ
ΠΊΠ»Π°ΡΡΠΎΠ² Π½Π°Π½ΠΎΠΌΠ°ΡΠ΅ΡΠΈΠ°Π»ΠΎ