SKA HI end2end simulation

The current status of the HI simulation efforts is presented, in which a self consistent simulation path is described and basic equations to calculate array sensitivities are given. There is a summary of the SKA Design Study (SKADS) sky simulation and a method for implementing it into the array simulator is presented. A short overview of HI sensitivity requirements is discussed and expected results for a simulated HI survey are presented.Comment: 7 pages, 6 figues, need skads2009.cls file to late

Goonhilly: a new site for e-MERLIN and the EVN

The benefits for the e-MERLIN and EVN arrays of using antennae at the satellite communication station at Goonhilly in Cornwall are discussed. The location of this site - new to astronomy - will provide an almost equal distribution of long baselines in the east-west- and north-south directions, and opens up the possibility to get significantly improved observations of equatorial fields with e-MERLIN. These additional baselines will improve the sensitivity on a set of critical spatial scales and will increase the angular resolution of e-MERLIN by a factor of two. e-MERLIN observations, including many allocated under the e-MERLIN Legacy programme, will benefit from the enhanced angular resolution and imaging capability especially for sources close to or below the celestial equator (where ESO facilities such as ALMA will operate) of including the Goonhilly telescopes. Furthermore, the baselines formed between Goonhilly and the existing stations will close the gap between the baselines of e-MERLIN and those of the European VLBI Network (EVN) and therefore enhance the legacy value of e-MERLIN datasets.Comment: 10 pages, 2 figue

Expanding e-MERLIN with the Goonhilly Earth Station

A consortium of universities has recently been formed with the goal of using the decommissioned telecommunications infrastructure at the Goonhilly Earth Station in Cornwall, UK, for astronomical purposes. One particular goal is the introduction of one or more of the ~30-metre parabolic antennas into the existing e-MERLIN radio interferometer. This article introduces this scheme and presents some simulations which quantify the improvements that would be brought to the e-MERLIN system. These include an approximate doubling of the spatial resolution of the array, an increase in its N-S extent with strong implications for imaging the most well-studied equatorial fields, accessible to ESO facilities including ALMA. It also increases the overlap between the e-MERLIN array and the European VLBI Network. We also discuss briefly some niche science areas in which an e-MERLIN array which included a receptor at Goonhilly would be potentially world-leading, in addition to enhancing the existing potential of e-MERLIN in its role as a Square Kilometer Array pathfinder instrument.Comment: 7 pages, 3 figures, to appear in the proceedings of "Astronomy with megastructures: Joint science with the E-ELT and SKA", 10-14 May 2010, Crete, Greece (Eds: Isobel Hook, Dimitra Rigopoulou, Steve Rawlings and Aris Karastergiou

Mapping the SKA Simulated Skies with the S3-Tools

The S3-Tools are a set of Python-based routines and interfaces whose purpose is to provide user-friendly access to the SKA Simulated Skies (S3) set of simulations, an effort led by the University of Oxford in the framework of the European Union's SKADS program (http://www.skads-eu.org). The databases built from the S3 simulations are hosted by the Oxford e-Research Center (OeRC), and can be accessed through a web portal at http://s-cubed.physics.ox.ac.uk. This paper focuses on the practical steps involved to make radio images from the S3-SEX and S3-SAX simulations using the S3-Map tool and should be taken as a broad overview. For a more complete description, the interested reader should look up the user's guide. The output images can then be used as input to instrument simulators, e.g. to assess technical designs and observational strategies for the SKA and SKA pathfinders

MESMER: MeerKAT Search for Molecules in the Epoch of Reionization

[Abridged] Observations of molecular gas at all redshifts are critical for measuring the cosmic evolution in molecular gas density and understanding the star-formation history of the Universe. The 12CO molecule (J=1-0 transition = 115.27 GHz) is the best proxy for extragalactic H2, which is the gas reservoir from which star formation occurs, and has been detected out to z~6. Typically, redshifted high-J lines are observed at mm-wavelengths, the most commonly targeted systems exhibiting high SFRs (e.g. submm galaxies), and far-IR-bright QSOs. While the most luminous objects are the most readily observed, detections of more typical galaxies with modest SFRs are essential for completing the picture. ALMA will be revolutionary in terms of increasing the detection rate and pushing the sensitivity limit down to include such galaxies, however the limited FoV when observing at such high frequencies makes it difficult to use ALMA for studies of the large-scale structure traced out by molecular gas in galaxies. This article introduces a strategy for a systematic search for molecular gas during the EoR (z~7 and above), capitalizing on the fact that the J=1-0 transition of 12CO enters the upper bands of cm-wave instruments at high-z. The FoV advantage gained by observing at such frequencies, coupled with modern broadband correlators allows significant cosmological volumes to be probed on reasonable timescales. In this article we present an overview of our future observing programme which has been awarded 6,500 hours as one of the Large Survey Projects for MeerKAT, the forthcoming South African SKA pathfinder instrument. Its large FoV and correlator bandwidth, and high-sensitivity provide unprecedented survey speed for such work. An existing astrophysical simulation is coupled with instrumental considerations to demonstrate the feasibility of such observations and predict detection rates.Comment: 7 pages, 4 figures, to appear in the proceedings of "Astronomy with megastructures: Joint science with the E-ELT and SKA", 10-14 May 2010, Crete, Greece (Eds: Isobel Hook, Dimitra Rigopoulou, Steve Rawlings and Aris Karastergiou

Epidermal Growth Factor–PEG Functionalized PAMAM-Pentaethylenehexamine Dendron for Targeted Gene Delivery Produced by Click Chemistry

Aim of this study was the site-specific conjugation of an epidermal growth factor (EGF)-polyethylene glycol (PEG) chain by click chemistry onto a poly(amido amine) (PAMAM) dendron, as a key step toward defined multifunctional carriers for targeted gene delivery. For this purpose, at first propargyl amine cored PAMAM dendrons with ester ends were synthesized. The chain terminal ester groups were then modified by oligoamines with different secondary amino densities. The oligoamine-modified PAMAM dendrons were well biocompatible, as demonstrated in cytotoxicity assays. Among the different oligoamine-modified dendrons, PAMAM-pentaethylenehexamine (PEHA) dendron polyplexes displayed the best gene transfer ability. Conjugation of PAMAM-PEHA dendron with PEG spacer was conducted via click reaction, which was performed before amidation with PEHA. The resultant PEG-PAMAM-PEHA copolymer was then coupled with EGF ligand. pDNA transfections in HuH-7 hepatocellular carcinoma cells showed a 10-fold higher efficiency with the polyplexes containing conjugated EGF as compared to the ligand-free ones, demonstrating the concept of ligand targeting. Overall gene transfer efficiencies, however, were moderate, suggesting that additional measures for overcoming subsequent intracellular bottlenecks in delivery have to be taken

LeMMINGs - II. The e-MERLIN legacy survey of nearby galaxies. The deepest radio view of the Palomar sample on parsec scale

We present the second data release of high-resolution (≤0.2 arcsec) 1.5-GHz radio images of 177 nearby galaxies from the Palomar sample, observed with the e-MERLIN array, as part of the Legacy e-MERLIN Multi-band Imaging of Nearby Galaxies Sample (LeMMINGs) survey. Together with the 103 targets of the first LeMMINGs data release, this represents a complete sample of 280 local active (LINER and Seyfert) and inactive galaxies (H II galaxies and absorption line galaxies, ALG). This large program is the deepest radio survey of the local Universe, ≳1017.6 W Hz−1, regardless of the host and nuclear type: we detect radio emission ≳0.25 mJy beam−1 for 125/280 galaxies (44.6 per cent) with sizes of typically ≲100 pc. Of those 125, 106 targets show a core which coincides within 1.2 arcsec with the optical nucleus. Although we observed mostly cores, around one third of the detected galaxies features jetted morphologies. The detected radio core luminosities of the sample range between ∼1034 and 1040 erg s−1. LINERs and Seyferts are the most luminous sources, whereas H II galaxies are the least. LINERs show FR I-like core-brightened radio structures while Seyferts reveal the highest fraction of symmetric morphologies. The majority of H II galaxies have single radio core or complex extended structures, which probably conceal a nuclear starburst and/or a weak active nucleus (seven of them show clear jets). ALGs, which are typically found in evolved ellipticals, although the least numerous, exhibit on average the most luminous radio structures, similar to LINERs

Functional Analysis of the Cytoskeleton Protein MreB from Chlamydophila pneumoniae

In rod-shaped bacteria, the bacterial actin ortholog MreB is considered to organize the incorporation of cell wall precursors into the side-wall, whereas the tubulin homologue FtsZ is known to tether incorporation of cell wall building blocks at the developing septum. For intracellular bacteria, there is no need to compensate osmotic pressure by means of a cell wall, and peptidoglycan has not been reliably detected in Chlamydiaceae. Surprisingly, a nearly complete pathway for the biosynthesis of the cell wall building block lipid II has been found in the genomes of Chlamydiaceae. In a previous study, we discussed the hypothesis that conservation of lipid II biosynthesis in cell wall-lacking bacteria may reflect the intimate molecular linkage of cell wall biosynthesis and cell division and thus an essential role of the precursor in cell division. Here, we investigate why spherical-shaped chlamydiae harbor MreB which is almost exclusively found in elongated bacteria (i.e. rods, vibrios, spirilla) whereas they lack the otherwise essential division protein FtsZ. We demonstrate that chlamydial MreB polymerizes in vitro and that polymerization is not inhibited by the blocking agent A22. As observed for MreB from Bacillus subtilis, chlamydial MreB does not require ATP for polymerization but is capable of ATP hydrolysis in phosphate release assays. Co-pelleting and bacterial two-hybrid experiments indicate that MreB from Chlamydophila (Chlamydia) pneumoniae interacts with MurF, MraY and MurG, three key components in lipid II biosynthesis. In addition, MreB polymerization is improved in the presence of MurF. Our findings suggest that MreB is involved in tethering biosynthesis of lipid II and as such may be necessary for maintaining a functional divisome machinery in Chlamydiaceae