On spherically symmetric distribution of matter with pressure in general relativity

The form of the solution of Einstein’s equations for a spherically symmetric distribution of matter in the co-moving coordinate system has been found. Although the pressure of matter is different from zero, the system is synchronous because of a suitable choice of the equation of state

Lack of consensus in social systems

We propose an exactly solvable model for the dynamics of voters in a two-party system. The opinion formation process is modeled on a random network of agents. The dynamical nature of interpersonal relations is also reflected in the model, as the connections in the network evolve with the dynamics of the voters. In the infinite time limit, an exact solution predicts the emergence of consensus, for arbitrary initial conditions. However, before consensus is reached, two different metastable states can persist for exponentially long times. One state reflects a perfect balancing of opinions, the other reflects a completely static situation. An estimate of the associated lifetimes suggests that lack of consensus is typical for large systems.Comment: 4 pages, 6 figures, submitted to Phys. Rev. Let

Can a matter-dominated model with constant bulk viscosity drive the accelerated expansion of the universe?

We test a cosmological model which the only component is a pressureless fluid with a constant bulk viscosity as an explanation for the present accelerated expansion of the universe. We classify all the possible scenarios for the universe predicted by the model according to their past, present and future evolution and we test its viability performing a Bayesian statistical analysis using the SCP ``Union'' data set (307 SNe Ia), imposing the second law of thermodynamics on the dimensionless constant bulk viscous coefficient \zeta and comparing the predicted age of the universe by the model with the constraints coming from the oldest globular clusters. The best estimated values found for \zeta and the Hubble constant Ho are: \zeta=1.922 \pm 0.089 and Ho=69.62 \pm 0.59 km/s/Mpc with a \chi^2=314. The age of the universe is found to be 14.95 \pm 0.42 Gyr. We see that the estimated value of Ho as well as of \chi^2 are very similar to those obtained from LCDM model using the same SNe Ia data set. The estimated age of the universe is in agreement with the constraints coming from the oldest globular clusters. Moreover, the estimated value of \zeta is positive in agreement with the second law of thermodynamics (SLT). On the other hand, we perform different forms of marginalization over the parameter Ho in order to study the sensibility of the results to the way how Ho is marginalized. We found that it is almost negligible the dependence between the best estimated values of the free parameters of this model and the way how Ho is marginalized in the present work. Therefore, this simple model might be a viable candidate to explain the present acceleration in the expansion of the universe.Comment: 31 pages, 12 figures and 2 tables. Accepted to be published in the Journal of Cosmology and Astroparticle Physics. Analysis using the new SCP "Union" SNe Ia dataset instead of the Gold 2006 and ESSENCE datasets and without changes in the conclusions. Added references. Related works: arXiv:0801.1686 and arXiv:0810.030

Bianchi Type I Magnetofluid Cosmological Models with Variable Cosmological Constant Revisited

The behaviour of magnetic field in anisotropic Bianchi type I cosmological model for bulk viscous distribution is investigated. The distribution consists of an electrically neutral viscous fluid with an infinite electrical conductivity. It is assumed that the component $\sigma^{1}_{1}$ of shear tensor $\sigma^{j}_{i}$ is proportional to expansion ($\theta$) and the coefficient of bulk viscosity is assumed to be a power function of mass density. Some physical and geometrical aspects of the models are also discussed in presence and also in absence of the magnetic field.Comment: 13 page

5 Rak endometrium – wstępna ocena tolerancji pooperacyjnej pulsacyjnej brachyterapii

CelOcena tolerancji dopochwowego leczenia PDR (pulsed dose-rate) chorych operowanych z powodu raka trzonu macicy.Materiał i MetodaU 110 chorych operowanych z powodu raka trzonu macicy przeprowadzono po raz pierwszy w Polsce w okresie od 1.10.1998 do 31.12.1999 roku uzupełniające dopochwowe leczenie techniką PDR. Chore leczone były cylindrycznym aplikatorem dopochwowym, otrzymywały 21 Gy w ciągu 21 godzin leczenia (dawka 1 Gy/h, czas trwania pulsu od 10 do 30 minut w związku ze spadkiem aktywności źródła irydowego). Dawkę obliczano 0,5 cm od powierzchni aplikatora oraz 1cm od szczytu pochwy. U każdej chorej indywidualnie obliczono rozkład dawki w terenie miednicy przy użyciu IBU oraz systemu Plato. U 43 chorych (39%) PDR był jedyną formą uzupełniającej radioterapii, u 67 chorych (61%) zastosowano dodatkowo napromienianie od zewnątrz. Odczyny popromienne oceniono w oparciu o klasyfikacje EORTC/RTOG.WynikiŚredni czas obserwacji chorych wynosił 15 miesięcy – od 6 do 32 miesięcy. Tolerancja leczenia była dobra. Wszystkie chore otrzymały napromienianie zgodnie z planem. Wczesny odczyn popromienny w pochwie w stopniu G1 wystąpił u 8 chorych (7,3%). U 10 chorych (9%) poza obszarem leczenia, w okolicy podcewkowej wystąpiła odleżyna o powierzchni do 1,5 cm2, podobnie jak u chorych leczonych cylindrycznym aplikatorem Selektronowym, wynikająca z rozmiaru aplikatora i jego ucisku. Wczesne odczyny popromienne w pęcherzu i w odbytnicy o lekkim przebiegu wystąpiły odpowiednio u 5 i 4 chorych. Późna reakcja popromienna w pochwie w stopniu G2 wystąpiła u jednej chorej. Późna reakcja popromienna w pęcherzu i w odbytnicy w stopniu G1 wystąpiła odpowiednio u 2 i 4 chorych. U jednej chorej wystąpił odczyn popromienny w odbytnicy w stopniu G4. W okresie obserwacji loko-regionalne niepowodzenie wystąpiło u 3 chorych (2,7%).WnioskiBrachyterapia dopochwowa PDR wydaje się być obiecującą, bezpieczną i dobrze tolerowaną metodą uzupełniającego leczenia chorych operowanych z powodu raka trzonu macicy

Effect of Long-Term Zinc Pollution on Soil Microbial Community Resistance to Repeated Contamination

The aim of the study was to compare the effects of stress (contamination trials) on the microorganisms in zinc-polluted soil (5,018 mg Zn kg−1 soil dry weight) and unpolluted soil (141 mg Zn kg−1 soil dw), measured as soil respiration rate. In the laboratory, soils were subjected to copper contamination (0, 500, 1,500 and 4,500 mg kg−1 soil dw), and then a bactericide (oxytetracycline) combined with a fungicide (captan) along with glucose (10 mg g−1 soil dw each) were added. There was a highly significant effect of soil type, copper treatment and oxytetracycline/captan treatment. The initial respiration rate of chronically zinc-polluted soil was higher than that of unpolluted soil, but in the copper treatment it showed a greater decline. Microorganisms in copper-treated soil were more susceptible to oxytetracycline/captan contamination. After the successive soil contamination trials the decline of soil respiration was greater in zinc-polluted soil than in unpolluted soil

Score regularization for peptide identification

<p>Abstract</p> <p>Background</p> <p>Peptide identification from tandem mass spectrometry (MS/MS) data is one of the most important problems in computational proteomics. This technique relies heavily on the accurate assessment of the quality of peptide-spectrum matches (PSMs). However, current MS technology and PSM scoring algorithm are far from perfect, leading to the generation of incorrect peptide-spectrum pairs. Thus, it is critical to develop new post-processing techniques that can distinguish true identifications from false identifications effectively.</p> <p>Results</p> <p>In this paper, we present a consistency-based PSM re-ranking method to improve the initial identification results. This method uses one additional assumption that two peptides belonging to the same protein should be correlated to each other. We formulate an optimization problem that embraces two objectives through regularization: the smoothing consistency among scores of correlated peptides and the fitting consistency between new scores and initial scores. This optimization problem can be solved analytically. The experimental study on several real MS/MS data sets shows that this re-ranking method improves the identification performance.</p> <p>Conclusions</p> <p>The score regularization method can be used as a general post-processing step for improving peptide identifications. Source codes and data sets are available at: <url>http://bioinformatics.ust.hk/SRPI.rar</url>.</p

Current challenges in software solutions for mass spectrometry-based quantitative proteomics

This work was in part supported by the PRIME-XS project, grant agreement number 262067, funded by the European Union seventh Framework Programme; The Netherlands Proteomics Centre, embedded in The Netherlands Genomics Initiative; The Netherlands Bioinformatics Centre; and the Centre for Biomedical Genetics (to S.C., B.B. and A.J.R.H); by NIH grants NCRR RR001614 and RR019934 (to the UCSF Mass Spectrometry Facility, director: A.L. Burlingame, P.B.); and by grants from the MRC, CR-UK, BBSRC and Barts and the London Charity (to P.C.

Extremely Low Birth Weight Predisposes to Impaired Renal Health: A Pooled Analysis

Background: A number of studies examined the association between preterm delivery and kidney size and function later in life. However, the number of cases in published cohort studies is low. This study was aimed at performing a multicenter collaboration to pool data to obtain more accurate results to quantify the extent of renal impairment in former extremely low birth weight (ELBW; <1,000 g) children. Methodology: We performed a subject-level metaanalysis to pool data from Cracow (64 cases/34 controls) and Leuven (93 cases/87 controls). We assessed and analyzed cystatin C, estimated glomerular filtration rate (eGFR), ultrasound kidney length, and blood pressure (BP) in 11-year-old ELBW children compared with controls born at term. The prevalence of hypertension (HT) and prehypertension (preHT) in both groups was also analyzed. Results: The study group comprised 157 former ELBW children (gestational age 23–33 weeks and birth weight 430–1,000 g) and 123 children born at term. Former ELBW children had lower mean eGFR (100.62 ± 16.53 vs. 111.89 ± 15.26 mL/min/1.73 m2; p < 0.001), smaller absolute kidney length (8.56 ± 0.78 vs. 9.008 ± 0.73 cm; <0.001), and higher systolic (111.8 ± 9.8 vs. 107.2 ± 9.07 mm Hg; p = 0.01) and diastolic (68.6 ± 6.8 vs. 66.3 ± 7.7 mm Hg; p = 0.03) BP. Smaller renal size in former ELBW children was positively associated with lower birth weight, shorter gestational age, and severity of perinatal complications (intraventricular hemorrhage, length of stay, mechanical ventilation, and oxygen therapy). Conclusion: ELBW is associated with lower eGFR and a high frequency of preHT and HT