Neighbour-joining tree based on nucleotide sequences of the whole ITS region of Enterocytozoon bieneusi isolates, including our new sequences (underlined).

<p>Genotypes previously found in apes and humans are shaded. The host is listed for each sample. Values on branches are percent bootstrapping using 1 000 replicates. The bootstrap proportions greater than 50% are shown on each branch. Nucleotide sequences generated from this study are underlined and are deposited in the GenBank under Accession Nos. JQ837793-JQ837800.</p

Enterocytozoon bieneusi, Encephalitozoon cuniculi, Cryptosporidium spp. and Giardia intestinalis infection in humans, wild and domestic animals.

<p><b>n</b>  =  number of samples; <b>EC I</b>  =  <i>E. cuniculi</i> genotype I; <b>EC II</b>  =  <i>E. cuniculi</i> genotype II; <b>E</b>  =  <i>Giardia intestinalis</i> assemblage E; <b>A</b>  =  <i>Giardia intestinalis</i> assemblage A.</p

<i>Enterocytozoon bieneusi</i>, <i>Encephalitozoon cuniculi</i>, <i>Cryptosporidium</i> spp. and <i>Giardia intestinalis</i> infection in wild western lowland gorillas (<i>Gorilla gorilla gorilla</i>) under different levels of human contact.

<p><b>D</b> =  <i>E. bieneusi</i> genotype D; <b>gorilla 1</b>  =  <i>E. bieneusi</i> genotype gorilla 1; <b>gorilla 2</b>  =  <i>E. bieneusi</i> genotype gorilla 2; <b>gorilla 3</b>  =  <i>E. bieneusi</i> genotype gorilla 3; <b>EC I</b>  =  <i>E. cuniculi</i> genotype I; <b>EC II</b>  =  <i>E. cuniculi</i> genotype II; <b>A</b>  =  <i>Giardia intestinalis</i> assemblage A; <b>n¹</b> number of samples; <b>n²</b> number of animals sampled.</p

Short adenovirus (hexon sequences) derived from great ape and human fecal samples

This FASTA file comprises 582 sequence