Variational objective analyses for cyclone studies

The basic analysis equations, i.e., the two horizontal momentum equations, the hydrostatic equation, and the integrated continuity equation were derived for the nonlinear vertical coordinate, nondimensionalized, and expressed in finite differences on a staggered grid. Special care was taken to transform the hydrostatic equation and the pressure gradient terms of the horizontal momentum equations to nearly eliminate truncation error over steeply sloping terrain. This formulation also eliminated explicit reference to orographically induced variations in the thermodynamic variables so that the variational adjustments are on the scale of the meteorological perturbations. The analysis equations were subjected to the Euler-Lagrange operations as expressed for finite differences and an additional set of five partial differential equations was derived, bringing to nine the number of equations in Model I. Higher order terms, terms containing observed quantities, and terms containing none of the variables to be adjusted were grouped into forcing functions and the equations were solved for the zero order terms. Zero order variables were eliminated between these equations and there resulted two diagnostic equations which take the form of general linear second order partial differential equations with nonconstant coefficients

Radiation reaction in the 2.5PN waveform from inspiralling binaries in circular orbits

In this Comment we compute the contributions of the radiation reaction force in the 2.5 post-Newtonian (PN) gravitational wave polarizations for compact binaries in circular orbits. (i) We point out and correct an inconsistency in the derivation of Arun, Blanchet, Iyer, and Qusailah. (ii) We prove that all contributions from radiation reaction in the 2.5PN waveform are actually negligible since they can be absorbed into a modification of the orbital phase at the 5PN order.Comment: 7 pages, no figures, submitted to CQ

Toward stable 3D numerical evolutions of black-hole spacetimes

Three dimensional (3D) numerical evolutions of static black holes with excision are presented. These evolutions extend to about 8000M, where M is the mass of the black hole. This degree of stability is achieved by using growth-rate estimates to guide the fine tuning of the parameters in a multi-parameter family of symmetric hyperbolic representations of the Einstein evolution equations. These evolutions were performed using a fixed gauge in order to separate the intrinsic stability of the evolution equations from the effects of stability-enhancing gauge choices.Comment: 4 pages, 5 figures. To appear in Phys. Rev. D. Minor additions to text for clarification. Added short paragraph about inner boundary dependenc

Potential for ill-posedness in several 2nd-order formulations of the Einstein equations

Second-order formulations of the 3+1 Einstein equations obtained by eliminating the extrinsic curvature in terms of the time derivative of the metric are examined with the aim of establishing whether they are well posed, in cases of somewhat wide interest, such as ADM, BSSN and generalized Einstein-Christoffel. The criterion for well-posedness of second-order systems employed is due to Kreiss and Ortiz. By this criterion, none of the three cases are strongly hyperbolic, but some of them are weakly hyperbolic, which means that they may yet be well posed but only under very restrictive conditions for the terms of order lower than second in the equations (which are not studied here). As a result, intuitive transferences of the property of well-posedness from first-order reductions of the Einstein equations to their originating second-order versions are unwarranted if not false.Comment: v1:6 pages; v2:7 pages, discussion extended, to appear in Phys. Rev. D; v3: typos corrected, published versio

Geostationary earth climate sensor: Scientific utility and feasibility, phase A

The possibility of accurate broad band radiation budget measurements from a GEO platform will provide a unique opportunity for viewing radiation processes in the atmosphere-ocean system. The CSU/TRW team has prepared a Phase 1 instrument design study demonstrating that measurements of radiation budget are practical from geosynchronous orbit with proven technology. This instrument concept is the Geostationary Earth Climate Sensor (GECS). A range of resolutions down to 20 km at the top of the atmosphere are possible, depending upon the scientific goals of the experiment. These tradeoffs of resolution and measurement repeat cycles are examined for scientific utility. The design of a flexible instrument is shown to be possible to meet the two goals: long-term, systematic monitoring of the diurnal cycles of radiation budget; and high time and space resolution studies of regional radiation features

How to make a blastocyst.

Several of the new reproductive technologies have been cultivated from our current understanding of the genetic programming and cellular processes that are involved in the major morphogenetic events of mammalian preimplantation development. Research directed at characterizing the patterns of gene expression during early development has shown that the embryo is initially under maternal control and later superseded by new transcriptional activity provided by the activation of the embryonic genome. Several embryonic transcripts encoding: (i) growth factors, (ii) cell junctions, (iii) plasma membrane ion transporters, and (iv) cell adhesion molecules have been identified as contributing directly to the progression of the embryo through the preimplantation interval of development. In this brief review, we have outlined the patterns of expression and the integral roles that these gene families play in the morphogenetic events of compaction and cavitation. Research of this type has greatly facilitate our understanding of the control processes that underlie preimplantation development and represent but one area of this exciting and vigorous field of research

Evolution systems for non-linear perturbations of background geometries

The formulation of the initial value problem for the Einstein equations is at the heart of obtaining interesting new solutions using numerical relativity and still very much under theoretical and applied scrutiny. We develop a specialised background geometry approach, for systems where there is non-trivial a priori knowledge about the spacetime under study. The background three-geometry and associated connection are used to express the ADM evolution equations in terms of physical non-linear deviations from that background. Expressing the equations in first order form leads naturally to a system closely linked to the Einstein-Christoffel system, introduced by Anderson and York, and sharing its hyperbolicity properties. We illustrate the drastic alteration of the source structure of the equations, and discuss why this is likely to be numerically advantageous.Comment: 12 pages, 3 figures, Revtex v3.0. Revised version to appear in Physical Review

Analytic Gradients for Complete Active Space Pair-Density Functional Theory

Analytic gradient routines are a desirable feature for quantum mechanical methods, allowing for efficient determination of equilibrium and transition state structures and several other molecular properties. In this work, we present analytical gradients for multiconfiguration pair-density functional theory (MC-PDFT) when used with a state-specific complete active space self-consistent field reference wave function. Our approach constructs a Lagrangian that is variational in all wave function parameters. We find that MC-PDFT locates equilibrium geometries for several small- to medium-sized organic molecules that are similar to those located by complete active space second-order perturbation theory but that are obtained with decreased computational cost