From Fate to Faith and Soil to Cell: Estimation of Phosphate (Pi) Uptake Rate, Pi-Uptake Kinetics and Relative Growth Rate are Important Parameters to Scavenge Pi by Brassica Cultivars under P-Starved Environment

As a rule, ion uptake by plant cells and roots has features of saturation kinetics. This is in accordance with the assumption of control, as for example by the number of binding sites of ions (carriers, permeases), or the capacity of the proton efflux pumps, in the plasma membrane and tonoplast. Solute transport across membranes is carrier mediated transport. Protein macromolecules integrated into the membrane matrix seems to be the carriers. The carrier-mediated process is subject to kinetics assumig that the number of carriers (binding sites) in the membranes is limited. Kinetics of ion transport through a membrane is considered equivalent to relationship between an enzyme and its substrate. To obtain plants of different P status, two genetically diverse Brassica cultivars (P-tolerant 'Con-1' and P-sensitive 'Gold Rush') were grown for several weeks in nutrient solution culture media. P-uptake kinetics of the roots with intact plants in short-term experiments by monitoring P depletion in culture media revealed that P-tolerant 'Con-1' cultivar had favorable characteristics for P-uptake because of high I(max) or V(max) and low K(m) or 1/2 I(max) value than P-sensitive 'Gold Rush' cultivar. By plotting relative growth rate (RGR) and internal P-concentration (PNC) among P-tolerant (group I; Brown Raya, Con-1, Rainbow, Dunkled and Peela Raya) and P-sensitive (group II; Toria, Sultan Raya, B.S.A, Toria Selection and Gold Rush) cultivars revealed that group I cultivars showed large metabolic fraction and small structural fraction than group II cultivars which provided basis for P-stress tolerance

Analyses of the Genetic Parameters (Variability, Heritability, Genetic Advance, Relationship of Yield and Yield Contributing Characters) for some Plant Traits among Brassica Cultivars under Phosphorus Starved Environmental Cues

The potential of a crop favorably respond to breeding/selection and bioengineering programs depends upon the nature and magnitude of genetic variability. For effective selection, information on nature and magnitude of variation in population, association of character with dry matter yield and among themselves and the extent of environmental influence on the expression of these characters are necessary. The estimates of genetic parameters help in understanding the role of various plant traits in establishing the growth behavior of cultivars under a given set of environmental conditions. Genetic analysis leads us to a clear understanding of different morphological, physiological and genetic characters and also the type and extent of their contribution to dry matter yield. Six Brassica cultivars were grown in a P-deficient sandy loam soil for 49 days after sowing. Significant variations were observed for all the characters in all the cultivars used in the experiment. All the characters showed high　heritability coupled with high genetic advance. Heritability (h(2)) is an approximate measure of the expression of a character. The highest estimates of broad sense heritability (h(2)= 0.90) and relative expected genetic advance (85.72%) were noted for root dry matter (RDM), while the estimate of expected genetic advance at 10% selection intensity was quite high (ΔG = 85.30c㎡) for leaf area per plant. The estimates of coheritability were positive and relatively higher for rootshoot ratio (RSR) in combination with shoot dry matter (SDM) (coh(2) = 2.002) and phosphorus use efficiency (PUE) (coh(2) = 1.875), whereas coheritability estimates were negative between leaf area per plant and RSR (coh(2) = -0.2010) indicating lack of association between these traits. High heritability with high genetic advance was exhibited by all the studied plant traits of cultivars evidencing that the traits could be further improved through individual plant selection. The innate variations within the Brassica gene-pool impel to drive a concentrated effort to understand the basis of adaptability. Access to the relevant genetic traits and information will provide necessary tools to select the optimal combinations of alleles adapted to local and changing growing environments especially nutrient stress conditions such as phosphorus (P) starvation

'Tailoring the Plant to Fit the Soil' in Stead of 'Tailoring the Soil to Fit the Plant' is an Alternate Environmental Sound Strategy to Acclimate Orthophosphate (Pi) Deprivation via Highly Coordinated Classical Pi-Starvation Induced Mechanisms

Acclimation to orthophosphate (Pi) deprivation via highly coordinated Pi-starvation induced (PSI) classical mechanisms such as copious quantities of H(+) and carboxylates (OAs) exudation, remodeling and modification of root architecture by increasing structural and functional plasticity, enhanced uptake rate and increased synthesis of Pi transporters would reduce or eliminate our current overreliance on expensive, polluting, and nonrenewable Pi-fertilizers. These complicated but elegant morphological, physiological, biochemical and molecular adjustments of Pi-starved plants provide an excellent example of how the unique flexibility of plant metabolism and energy transduction helps them to cope in a typically stressful environment. Pi-starved roots possess enhanced H(+)-ATPase and PEPCase which could result in increasing H(+) efflux and OAs exudations in the root vicinity. This would lead to the rhizosphere acidification, which thereby contribute to the solublization and assimilation of mineral Pi from environment. To visualize the dissolution of sparingly soluble Ca-phosphate and rhizospheric pH changes (in situ), genetically diverse Brassica cultivars were grown on agar media. Newly formed Ca-phosphate was suspended in agar containing other essential nutriens. With NH(4)(+) applied as the N source, the precipitate dissolved in the root vicinity and this was ascribed to acidification. No dissolution was occurred with No(3)(-)-nutrition. In order to observe the pH changes at the media-root interface (rhizosphere), an image analysis was carried out after embedding the roots in agar containing bromocresol purple as pH indicator. Efficient cultivar 'Brown Raya' showed greater decrease in pH than P-inefficient 'B.S.A' in the culture media. Hydroponically grown cultivars were compared with respect to P-utilization efficiency (PUE), P-stress factor (PSF), and Ca- and P-uptake at P-starvation. PUE, and Ca- and P-uptake correlated significantly (P<0.01) with biomass accumulation, indicating that higher P-uptake of efficient cultivars was because of their higher Ca-uptake, which in turn was related to their better P-acquisition and PUE. Remodelling of root architecture of efficient cultivars helped the cultivars to establish a better rooting system, which provided basis for tolerance under P-starvation

Characterization and Screening of N(2)-fixing Microorganisms at Maturity Stage in Rhizosphere of Rice Grown in Brahmaputra Alluvium Soil of Bangladesh

Studies on the existing non-symbiotic diazotrophic systems still are the most promising for better use of biological nitrogen fixation (BNF) in agriculture. The possibilities for the extension of nitrogen fixation to rice plants still speculative. The prospect of extension of N(2)-fixation to other plants was originally formulated to simulate the possibilities for the biological use of atmospheric nitrogen in order to overcome the ecological and economical problems of nitrogenous fertilizers. In view of this, the present study was conducted for the characterization and identification of N(2)-fixing bacterial strains at the maturity (110 days) stage in rhizosphere of rice (BR 10, Oryza sativa L.) grown in Brahmaputra Alluvium soil of Bangladesh. The soil is characterized as 'Inceptisol' order and 'Aquept' suborder. It was identified as 'Dhamrai series', had 'silt' texture, pH 6.0 and 6.8 C/N ratio. The present results of the microbial tests on the rice rhizosphere soil demonstrated that out of 401 isolates, only 94 were branded as nitrogen fixing organisms per gram of soil, which is about 23.4% of the total isolates. Based on the selection criteria, four individual strains were selected for identification. Biochemical tests were conducted for proper identification. They were identified as Closteridium spp., Klebsiella spp., Bacillus spp. and Azospirllum spp

Effects of Brick Burning on Microbial Biomass and C/N Ratio in Selected Soil Profiles in the Eastern Region of Bangladesh

The pH values in the profiles of unburnt (agricultural land) soils were found to increase as a function of soil depth and burning (400 to 1000℃) of the soils increased average pH by 8%. The average sand content of the burnt (soil around brick kilns) soil profiles was increased by 245%, while 39 and 36% decreased the silt and clay contents. Soil organic carbon (Corg) in the unburnt soils (0-20 cm) at different agro-ecological zones in the eastern region of Bangladesh ranged from 0.8 and 1.4%, whereas the content of microbial biomass carbon (Cmic) in the studied unburnt soils ranged between 5 and 7% of the total Corg, suggesting that the microbial biomass releasing considerable amounts of carbon in soil while burning of the soils drastically reduced this contribution to about 1%. The values of soil Cmic in the unburnt soils were approximately 2 to 6 times higher in the topsoils than the subsoils (20-60 cm). Variable rainfall, temperature and soil fertility had an overriding influence, which was reflected by the average minimum (276 μg g(-1)) and maximum (439) amounts of soil Cmic in Moulvibazar and Cox' Bazar sites. The Cmic decreased upon soil burning by 92% of its original average value (346 μg g(-1)) in the soil profile of up to 100 cm. Burning of topsoils strikingly increased the Corg/Cmic ratio by about 6 to 9 times, while reduced the C/N ratio by about 1.5 to 2.5 times. The average loss of Corg, available and total N due to burning of the soils were 66, 72 and 44% (increase over average content of unburnt soil: IOAC), respectively, which suggests that the burning of the soils offset the essential roles of soil microorganisms, reduced soil fertility and soil microbial contribution

Characterization and Screening of N 2 -fixing Microorganisms at Maturity Stage in Rhizosphere of Rice Grown in Brahmaputra Alluvium Soil of Bangladesh * 1 I

Studies on the existing non-symbiotic diazotrophic systems still are the most promising for better use of biological nitrogen fixation (BNF) in agriculture. The possibilities for the extension of nitrogen fixation to rice plants still speculative. The prospect of extension ofN 2 -fixation to other plants was originally formulated to simulate the possibilities for the biological use of atmospheric nitrogen in order to overcome the ecological and economical problems of nitrogenous fertilizers. In view of this, the present study was conducted for the characterization and identification of Nrfixing bacterial strains at the maturity (110 days) stage in rhizosphere of rice (BR 10, Oryza sativa L.) grown in Brahmaputra Alluvium soil of Bangladesh. The soil is characterized as &apos;Inceptisol&apos; order and &apos;Aquept&apos; suborder. It was identified as &apos;Dhamrai series&apos;, had &apos;silt&apos; texture, pH 6.0 and 6.8 C/N ratio. The present results of the microbial tests on the rice rhizosphere soil demonstrated that out of 401 isolates, only 94 were branded as nitrogen fixing organisms per gram of soil, which is about 23.4 % of the total isolates. Based on the selection criteria, four individual strains were selected for identification. Biochemical tests were conducted for proper identification. They were identified as Closteridium spp., Klebsiella spp., Bacillus spp. and Azospirllum spp

Trapped lipopolysaccharide and LptD intermediates reveal lipopolysaccharide translocation steps across the Escherichia coli outer membrane

Lipopolysaccharide (LPS) is a main component of the outer membrane of Gram-negative bacteria, which is essential for the vitality of most Gram-negative bacteria and plays a critical role for drug resistance. LptD/E complex forms a N-terminal LPS transport slide, a hydrophobic intramembrane hole and the hydrophilic channel of the barrel, for LPS transport, lipid A insertion and core oligosaccharide and O-antigen polysaccharide translocation, respectively. However, there is no direct evidence to confirm that LptD/E transports LPS from the periplasm to the external leaflet of the outer membrane. By replacing LptD residues with an unnatural amino acid p-benzoyl-L-phenyalanine (pBPA) and UV-photo-cross-linking in E.coli, the translocon and LPS intermediates were obtained at the N-terminal domain, the intramembrane hole, the lumenal gate, the lumen of LptD channel, and the extracellular loop 1 and 4, providing the first direct evidence and “snapshots” to reveal LPS translocation steps across the outer membrane

Cytokine and chemokine response in children with the 2009 pandemic influenza A (H1N1) virus infection

We report the systemic cytokine and chemokine response in children with the 2009 pandemic influenza A (H1N1) virus infection. In patients with pneumonia, the serum levels of IFN-γ and IL-5 were significantly higher than those in patients without pneumonia. This tendency was also present for IL-6, IL-8, IL-10, IL-13, and MCP-1 in patients with pneumonia. Among patients with pneumonia, the levels of MCP-1 were significantly higher in the group of patients with pneumonia with severe respiratory failure than patients with mild pneumonia