Lions loose on a gentleman's lawn:animality, authenticity and automoblity in the English safari park

A phylogenetic tree with additional discrete-data of leaflet anatomical traits observed in southern African Oxalis. A single ITS phylogenetic tree from the BEAST posterior distribution for southern African Oxalis taxa. The discrete data of 15 additional leaflet anatomical traits as noted in the results section of this article. (TIF 6750 kb

probeSequences_OxalisHybSeq

Final low-copy nuclear probe sequences (output of step 11 of Sondovač

ASTRAL_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq

ASTRAL species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup

MRP_supertree_fromRAxMLGeneTrees_OxalisHybSeq

MRP supertree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with maximum likelihood). Oxalis corniculata was used as outgroup

STAR_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq

STAR species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup

MrBayesGeneTrees_OxalisHybSeq

Bayesian inference gene trees of 727 low-copy nuclear genes of 25 southern African Oxalis accessions and Oxalis corniculata

concatenatedLCNloci_bootstrapped_RAxML_OxalisHybSeq

Bootstrapped maximum likelihood tree based on concatenation of 727 low-copy nuclear genes of 25 southern African Oxalis accessions. Oxalis corniculata was used as outgroup

MP-EST_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq

MP-EST species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup

STAR_bootstrappedSpeciesTree_fromRAxMLGeneTrees_OxalisHybSeq

Bootstrapped STAR species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with maximum likelihood). Oxalis corniculata was used as outgroup

Assembly_plastome_OxalisHybSeq

Alignreads ACE assembly files of 24 southern African Oxalis accessions (Hyb-Seq) and one genome skim accession (J12