16 research outputs found
Lions loose on a gentleman's lawn:animality, authenticity and automoblity in the English safari park
A phylogenetic tree with additional discrete-data of leaflet anatomical traits observed in southern African Oxalis. A single ITS phylogenetic tree from the BEAST posterior distribution for southern African Oxalis taxa. The discrete data of 15 additional leaflet anatomical traits as noted in the results section of this article. (TIF 6750ĆĀ kb
probeSequences_OxalisHybSeq
Final low-copy nuclear probe sequences (output of step 11 of SondovaÄ
ASTRAL_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq
ASTRAL species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup
MRP_supertree_fromRAxMLGeneTrees_OxalisHybSeq
MRP supertree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with maximum likelihood). Oxalis corniculata was used as outgroup
STAR_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq
STAR species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup
MrBayesGeneTrees_OxalisHybSeq
Bayesian inference gene trees of 727 low-copy nuclear genes of 25 southern African Oxalis accessions and Oxalis corniculata
concatenatedLCNloci_bootstrapped_RAxML_OxalisHybSeq
Bootstrapped maximum likelihood tree based on concatenation of 727 low-copy nuclear genes of 25 southern African Oxalis accessions. Oxalis corniculata was used as outgroup
MP-EST_speciesTree_fromMrBayesGeneTrees_OxalisHybSeq
MP-EST species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with Bayesian inference). Oxalis corniculata was used as outgroup
STAR_bootstrappedSpeciesTree_fromRAxMLGeneTrees_OxalisHybSeq
Bootstrapped STAR species tree from 727 low-copy nuclear gene trees of 25 southern African Oxalis accessions (gene tree estimation with maximum likelihood). Oxalis corniculata was used as outgroup
Assembly_plastome_OxalisHybSeq
Alignreads ACE assembly files of 24 southern African Oxalis accessions (Hyb-Seq) and one genome skim accession (J12