Heterosis as Investigated in Terms of Polyploidy and Genetic Diversity Using Designed Brassica juncea Amphiploid and Its Progenitor Diploid Species

Fixed heterosis resulting from favorable interactions between the genes on their homoeologous genomes in an allopolyploid is considered analogous to classical heterosis accruing from interactions between homologous chromosomes in heterozygous plants of a diploid species. It has been hypothesized that fixed heterosis may be one of the causes of low classical heterosis in allopolyploids. We used Indian mustard (Brassica juncea, 2n = 36; AABB) as a model system to analyze this hypothesis due to ease of its resynthesis from its diploid progenitors, B. rapa (2n = 20; AA) and B. nigra (2n = 16; BB). Both forms of heterosis were investigated in terms of ploidy level, gene action and genetic diversity. To facilitate this, eleven B. juncea genotypes were resynthesized by hybridizing ten near inbred lines of B. rapa and nine of B. nigra. Three half diallel combinations involving resynthesized B. juncea (11×11) and the corresponding progenitor genotypes of B. rapa (10×10) and B. nigra (9×9) were evaluated. Genetic diversity was estimated based on DNA polymorphism generated by SSR primers. Heterosis and genetic diversity in parental diploid species appeared not to predict heterosis and genetic diversity at alloploid level. There was also no association between combining ability, genetic diversity and heterosis across ploidy. Though a large proportion (0.47) of combinations showed positive values, the average fixed heterosis was low for seed yield but high for biomass yield. The genetic diversity was a significant contributor to fixed heterosis for biomass yield, due possibly to adaptive advantage it may confer on de novo alloploids during evolution. Good general/specific combiners at diploid level did not necessarily produce good general/specific combiners at amphiploid level. It was also concluded that polyploidy impacts classical heterosis indirectly due to the negative association between fixed heterosis and classical heterosis

DNA methylation in diploid inbred lines of potatoes and its possible role in the regulation of heterosis

Self-incompatible diploid potatoes were altered to self-compatible ones by a function of S-locus inhibitor gene and continued selfing generated highly homozygous inbreds. In this study, this process was investigated for the status of DNA methylation by a simple method using genomic DNA digested by methylation-sensitive restriction enzymes prior to RAPD analysis. We detected 31 methylation-sensitive RAPD bands, of which 11 were newly appeared in the selfed progenies, and 6 of them stably inherited to subsequent generations. Aberrant segregations and paternal- or atavism-like transmission were also found. Segregating methylation-sensitive bands in initial populations became fixed in the advanced selfed progenies by 75.0–93.8%, of which 41.7% were fixed to all present and 58.3% to all absent. Because DNA methylation is generally recognized to suppress gene expression as regulatory factors, homozygosity/heterozygosity of methylated DNA may be involved in inbreeding depression/heterosis

Effect of recombination in the maize breeding population with exotic germplasm on the yield stability

A little knowledge exists about the probability that recombination in the parental maize populations will enhance the chances to select more stable genotypes. The synthetic parent maize population ((1601/5 x ZPL913)F-2 = R-0) with 25% of exotic germplasm was used to assess: (i) genotype x environment interaction and estimate stability of genotypes using nonparametric statistics; (ii) the effect of three (R-3) and five (R-5) gene recombination cycles on yield stability of genotypes; (iii) relationship among different nonparametric stability measures. The increase of mean grain yield was significant ( lt 0.01) in the R-3 and R-5 in comparison to the R-0, while it was not significant between R-3 and R-5. Analysis of variance showed significant ( lt 0.01) effects of environments, families per set, environment x set interaction, family x environment interaction per set on grain yield. The non-significant noncrossover and significant crossover ( lt 0.01) G x (E) interactions were found according to Bredenkamp procedures and van der Laan-de Kroon test, respectively. The significant ( lt 0.01) differences in stability were observed between R-0-set 3 and R-5-set 3 determined by , R-3-set 1 and R-5-set 1 determined by ( lt 0.05), and R-0-set 3 and R-5-set 3 determined by ( lt 0.05). The significant parameters were those which take into account yield and stability so the differences could be due to differences in yield rather than stability. Findings can help breeders to assume the most optimum number of supplementary gene recombination to achieve satisfactory yield mean and yield stability of maize genotypes originating from breeding populations