25 research outputs found
Patients included in different procedures of the study according to the seminal viral load.
<p>Patients included in different procedures of the study according to the seminal viral load.</p
Seminal fluid values of the 20 patients treated with mDRV/C compared with the results of 21 patients treated initially with ART and then with mDRV/r [6].
<p>Seminal fluid values of the 20 patients treated with mDRV/C compared with the results of 21 patients treated initially with ART and then with mDRV/r [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0196257#pone.0196257.ref006" target="_blank">6</a>].</p
ML phylogenetic tree of the global HIV-1 subtype B <i>pol</i> sequences.
<p>The phylogenetic tree was constructed by the general time-reversible with gamma-distributed rate heterogeneity across sites model of substitution implemented into RAxML. Branches are drawn on scale with the bar at the bottom, which represents 0.03 nucleotide substitution per site and a progressive bootstrap gradient value using FigTree, v. 1.4. The statistically highly supported nodes (bootstrap >70%) and the clusters with five or more related sequences are indicated by an asterisk (*).</p
Distribution of the HIV-1 non-subtype B genetic forms detected in Eastern Andalusia over the 2005â2012 period.
<p>Distribution of the HIV-1 non-subtype B genetic forms detected in Eastern Andalusia over the 2005â2012 period.</p
Bayesian phylogenetic tree inferred for the subtype A1, C, F1 and G/CRF14_BG <i>pol</i> sequences sampled in Eastern Andalusia and genetically similar sequences from GenBank.
<p>Red branches correspond to the sequences sampled in eastern Andalusia from 2005 to 2012. Statistically highly supported nodes (posterior probability values above 0.9) are indicated with an asterisk (*). Andalusian clusters are highlighted in yellow. Andalusian sequences names contain a three-part code: Sequence number, sampling site (AL: AlmerĂa, EJ: El Ejido GR: Granada, JA: JaĂ©n, MO: Motril) and the code of the most likely country of infection.</p
Bayesian maximum clade credibility phylogeographic tree of the HIV-1 Subtype B by the Bayesian discrete approach in BEAST v1.7.5.
<p>The upper left bar represents the gradient of location probability. Nodes were drawn using a progressive ancestral probability location value of 0â1. Colours of terminal and internal branches indicate the sampling location for each sequence and the most probable ancestral location for each clade, respectively. The clusters of greatest epidemiological interest (â„5 patients grouped) are indicated by an asterisk (*).</p
Bayesian phylogenetic tree inferred for the CRF02_AG <i>pol</i> sequences sampled in Eastern Andalusia and genetically similar sequences from GenBank.
<p>Red branches correspond to the sequences sampled in eastern Andalusia from 2005 to 2012. Statistically highly supported nodes (posterior probability values above 0.9) are indicated with an asterisk (*). Andalusian clusters are highlighted in yellow. Andalusian sequences names contain a three-part code: Sequence number, sampling site (AL: AlmerĂa, EJ: El Ejido GR: Granada, JA: JaĂ©n, MO: Motril) and the code of the most likely country of infection.</p
Global ML phylogenetic tree inferred for the main HIV-1 non-B genetic forms sampled in Eastern Andalusia.
<p>The phylogenetic tree was constructed by the general time-reversible with gamma-distributed rate heterogeneity across sites model of substitution implemented into RAxML. Branches are drawn on scale with the bar at the bottom, which represents 0.04 nucleotide substitution per site. Statistically highly supported nodes (bootstrap values >70%) are indicated by an asterisk (*). Andalusian clusters and international lineages are highlighted in yellow and blue, respectively. The Andalusian sequence names contain a three-part code: Sequence number, sampling site (AL: AlmerĂa, EJ: El Ejido GR: Granada, JA: JaĂ©n, MO: Motril) and the code of the most likely country of infection.</p
Semen quality in patients receiving mDRV/r [6] and mDRV/C.
<p>Semen quality in patients receiving mDRV/r [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0196257#pone.0196257.ref006" target="_blank">6</a>] and mDRV/C.</p
Bayesian maximum clade credibility phylogeographic tree of the HIV-1 Subtype B by the Bayesian discrete approach in BEAST v1.7.5.
<p>The upper left bar represents the gradient of location probability. Nodes were drawn using a progressive ancestral probability location value of 0â1. Colours of terminal and internal branches indicate the sampling location for each sequence and the most probable ancestral location for each clade, respectively. The clusters of greatest epidemiological interest (â„5 patients grouped) are indicated by an asterisk (*).</p