Immune and oxidative stress disorder in ovulation-dysfunction women revealed by single-cell transcriptome

IntroductionOvulation dysfunction is now a widespread cause of infertility around the world. Although the impact of immune cells in human reproduction has been widely investigated, systematic understanding of the changes of the immune atlas under female ovulation remain less understood.MethodsHere, we generated single cell transcriptomic profiles of 80,689 PBMCs in three representative statuses of ovulation dysfunction, i.e., polycystic ovary syndrome (PCOS), primary ovarian insufficiency (POI) and menopause (MENO), and identified totally 7 major cell types and 25 subsets of cells.ResultsOur study revealed distinct cluster distributions of immune cells among individuals of ovulation disorders and health. In patients with ovulation dysfunction, we observed a significant reduction in populations of naïve CD8 T cells and effector memory CD4 T cells, whereas circulating NK cells and regulatory NK cells increased.DiscussionOur results highlight the significant contribution of cDC-mediated signaling pathways to the overall inflammatory response within ovulation disorders. Furthermore, our data demonstrated a significant upregulation of oxidative stress in patients with ovulation disorder. Overall, our study gave a deeper insight into the mechanism of PCOS, POI, and menopause, which may contribute to the better diagnosis and treatments of these ovulatory disorder

RETRACTED: MiR-22 Inhibition Alleviates Cardiac Dysfunction in Doxorubicin-Induced Cardiomyopathy by Targeting the sirt1/PGC-1α Pathway

Doxorubicin (DOX) cardiotoxicity is a life-threatening side effect that leads to a poor prognosis in patients receiving chemotherapy. We investigated the role of miR-22 in doxorubicin-induced cardiomyopathy and the underlying mechanism in vivo and in vitro. Specifically, we designed loss-of-function and gain-of-function experiments to identify the role of miR-22 in doxorubicin-induced cardiomyopathy. Our data suggested that inhibiting miR-22 alleviated cardiac fibrosis and cardiac dysfunction induced by doxorubicin. In addition, inhibiting miR-22 mitigated mitochondrial dysfunction through the sirt1/PGC-1α pathway. Knocking out miR-22 enhanced mitochondrial biogenesis, as evidenced by increased PGC-1α, TFAM, and NRF-1 expression in vivo. Furthermore, knocking out miR-22 rescued mitophagy, which was confirmed by increased expression of PINK1 and parkin and by the colocalization of LC3 and mitochondria. These protective effects were abolished by overexpressing miR-22. In conclusion, miR-22 may represent a new target to alleviate cardiac dysfunction in doxorubicin-induced cardiomyopathy and improve prognosis in patients receiving chemotherapy

Subtelomeric assembly of a multi-gene pathway for antimicrobial defense compounds in cereals

Non-random gene organization in eukaryotes plays a significant role in genome evolution. Here, we investigate the origin of a biosynthetic gene cluster for production of defence compounds in oat—the avenacin cluster. We elucidate the structure and organisation of this 12-gene cluster, characterise the last two missing pathway steps, and reconstitute the entire pathway in tobacco by transient expression. We show that the cluster has formed de novo since the divergence of oats in a subtelomeric region of the genome that lacks homology with other grasses, and that gene order is approximately colinear with the biosynthetic pathway. We speculate that the positioning of the late pathway genes furthest away from the telomere may mitigate against a ‘self-poisoning’ scenario in which toxic intermediates accumulate as a result of telomeric gene deletions. Our investigations reveal a striking example of adaptive evolution underpinned by remarkable genome plasticity

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

The tug-of-war on iron between plant and pathogen

Abstract Iron participates in various crucial metabolic processes as an essential cofactor of many enzymes, which are vital to the survival of plants and their pathogens. However, excessive iron is toxic to the cells of plants and pathogens. Iron plays a complex role in the interactions between plants and pathogens. Plants and pathogens have evolved sophisticated mechanisms to modulate iron status at a moderate level for maintaining fitness. Iron competition extensively exists on both sides of plants and pathogens during infection. Plants employ iron withholding, local iron accumulation, or iron deficiency to trigger resistance against pathogens. Pathogens counteract host-derived iron stress or interfere with plant iron homeostasis to ensure virulence during infection. This review focuses on the recent progress in understanding the roles of iron in plant-pathogen interactions and proposes prospects for future studies

Reaction Behavior and Formation Mechanism of ZrB2 and ZrC from the Ni-Zr-B4C System during Self-Propagating High-Temperature Synthesis

Self-propagating high-temperature synthesis (SHS) is a good way to prepare ZrB2-ZrC/metal cermet composites. In this work, ZrB2-ZrC/Ni cermet composites with various Ni contents were successfully fabricated by SHS using the Ni-Zr-B4C system. The effects of Ni content and particle size of the B4C powder on the SHS reaction were investigated. The results indicated that with an increase in Ni content, the adiabatic temperature, maximum combustion temperature, ignition delay time, and ceramic particle size in the product all showed a gradually decreasing trend. The SHS products and the ignition of the SHS reactions were significantly dependent on the B4C particle size. The formation mechanism of ZrB2 and ZrC during SHS from the Ni-Zr-B4C system was proposed based on the combustion wave quenching experiment

The prognostic values of the expression of Vimentin, TP53, and Podoplanin in patients with cervical cancer

Abstract Purpose Epithelial–mesenchymal transition (EMT), TP53, and Podoplanin have been implicated in the tumorigenesis and metastasis of human cancers. Nevertheless, the clinical significance of these markers in cancer patients is still not clear. In this study, we sought to determine the prognostic values of Vimentin, TP53, and Podoplanin in patients with cervical cancer. Methods Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot analysis were performed to determine the messenger RNA and protein expression levels of Vimentin, TP53, and Podoplanin, respectively, in cervical squamous cell carcinoma and adjacent normal cervical tissues. Additionally, the expression levels of Podoplanin were also measured in 130 cervical cancer patients (FIGO stages Ib1–IIa2) using immunohistochemistry (IHC) staining. Results The mRNA expression levels of Vimentin, TP53, and Podoplanin were considerably elevated in cervical cancer tissues, compared with those in the adjacent normal cervical tissues. Additionally, the protein expression levels of Vimentin were closely correlated with the age of onset (P = 0.007), lymph node metastasis (P = 0.007), lymphatic invasion (P = 0.024), disease recurrence (P < 0.001), and the clinical prognosis of patients with cervical cancer (P < 0.001). Our multivariate analysis also suggests that Vimentin is an independent marker for survival in cervical cancer patients. Furthermore, the expression levels of Vimentin are negatively correlated with the proliferation marker Ki67 expression. Conclusions Our data show that Vimentin can serve as an independent prognostic marker for cervical cancer patients with primary surgery. Registration number ChiCTR-TRC-06000236 Registered 15 December 200

Barriers to physically active for UBC students

Our study seeks to identify whether there are differences in perceived barriers to physical activity between active and inactive university students. We believed that the barriers “lack of energy”, “lack of time” and “lack of willpower” are the most influential barriers. We also hypothesize that physically inactive students will rate each of the 7 barriers to physical activity as more of a barrier compared to physically active students. The study we conducted tries to rectify this with a study of UBC students. Undergraduate UBC students (n = 100) were recruited to the study. Participant’s current exercise habits and perceived barriers to physical activity were assessed. Students were asked to participate in a survey found online from a previous research. Mean scores derived from the calculation method provided with the survey were computed. Statistically significant results were found between the physically active and inactive groups. “Lack of energy”, “Lack of willpower”, and “Lack of time” were the top three most significant barriers perceived students at UBC. No significant results between genders were found in this study. This study could be replicated with a larger sample size in future research to increase the validity and to accurately identify perceived barriers in order to enhance physical activity among students at UBC. Disclaimer: “UBC SEEDS provides students with the opportunity to share the findings of their studies, as well as their opinions, conclusions and recommendations with the UBC community. The reader should bear in mind that this is a student project/report and is not an official document of UBC. Furthermore readers should bear in mind that these reports may not reflect the current status of activities at UBC. We urge you to contact the research persons mentioned in a report or the SEEDS Coordinator about the current status of the subject matter of a project/report.”Arts, Faculty ofPsychology, Department ofUnreviewedUndergraduat

Temperature May Play a More Important Role in Environmental DNA Decay than Ultraviolet Radiation

Environmental DNA (eDNA) preservation is crucial for biological monitoring using eDNA technology. The decay of eDNA over time in natural water bodies and the effects of temperature and ultraviolet (UV) radiation on the decay rate are largely unknown. In this study, the linear and exponential decay models were used to explore the relationship between residual eDNA content and decay time, respectively. It was found that the residual eDNA content treated with a higher temperature decreased by an average of 89.65% at the end of experiment, while those in the 4 °C treatment group remained stable. The higher decision coefficient (R2) of the exponential decay models indicated that they could better reflect the decay of eDNA over time than linear. The difference in the decay rates of the exponential modes was slight between the 20 °C (25.47%) and 20 °C + UV treatment groups (31.64%), but both were much higher than that of the 4 °C group (2.94%). The results suggest that water temperature significantly affected the decay rate of eDNA, while UV radiation had little effect