Viruses in extreme environments

The original publication is available at www.springerlink.comInternational audienceThe tolerance limits of extremophiles in term of temperature, pH, salinity, desiccation, hydrostatic pressure, radiation, anaerobiosis far exceed what can support non-extremophilic organisms. Like all other organisms, extremophiles serve as hosts for viral replication. Many lines of evidence suggest that viruses could no more be regarded as simple infectious ‘‘fragments of life'' but on the contrary as one of the major components of the biosphere. The exploration of niches with seemingly harsh life conditions as hypersaline and soda lakes, Sahara desert, polar environments or hot acid springs and deep sea hydrothermal vents, permitted to track successfully the presence of viruses. Substantial populations of double-stranded DNA virus that can reach 109 particles per milliliter were recorded. All these viral communities, with genome size ranging from 14 kb to 80 kb, seem to be genetically distinct, suggesting specific niche adaptation. Nevertheless, at this stage of the knowledge, very little is known of their origin, activity, or importance to the in situ microbial dynamics. The continuous attempts to isolate and to study viruses that thrive in extreme environments will be needed to address such questions. However, this topic appears to open a new window on an unexplored part of the viral world

Microbial life in volcanic lakes

Lakes in the craters of active volcanoes and their related streams are often characterised by conditions considered extreme for life, such as high temperatures, low pH and very high concentrations of dissolved metals and minerals. Such lakes tend to be transient features whose geochemistry can change markedly over short time periods. They might also vanish completely during eruption episodes or by drainage through the crater wall or floor. These lakes and their effluent streams and springs host taxonomically and metabolically diverse microorganisms belonging in the Archaea, Bacteria, and Eucarya. In volcanic ecosystems the relation between geosphere and biosphere is particularly tight; microbial community diversity is shaped by the geochemical parameters of the lake, and by the activities of microbes interacting with the water and sediments. Sampling these lakes is often challenging, and few have even been sampled once, especially in a microbiological context. Developments in high-throughput cultivation procedures, single-cell selection techniques, and massive increases in DNA sequencing throughput, should encourage efforts to define which microbes inhabit these features and how they interact with each other and the volcano. The study of microbial communities in volcanic lake systems sheds light on possible origins of life on early Earth. Other potential outcomes include the development of microbial inocula to promote plant growth in altered or degraded soils, bioremediation of contaminated waste or land, and the discovery of enzymes or other proteins industrial or medical applications

February 2003 marine atmospheric conditions and the bora over the northern Adriatic

A winter oceanographic field experiment provided an opportunity to examine the atmospheric marine conditions over the northern Adriatic. Mean February winds are from a northeasterly direction over most of the Adriatic and a more northerly direction along the western coast. Wind speeds are fastest in jets over the NE coast during bora events and weakest in the mid-northwestern Adriatic. Diurnal air temperature cycles are smallest on the NE coast and largest in the midwestern Adriatic. The maximum sea-air difference is +10°C on the eastern coast and near zero on the midwestern Adriatic. Boras are northeasterly (from) wind events that sweep off Croatia and Slovenia, bringing slightly colder and drier air over the northern Adriatic. The main bora season is December to March. Winter 2002–2003 was normal for bora events. Synoptic-scale temporal variations are correlated over the northern Adriatic. Fastest Bora winds and highest wind stress over the northern Adriatic is concentrated in four topographically controlled jets. The strongest is the Senj Jet, while the Trieste Jet extends across the entire northern Adriatic. Between each two jets is a weak wind zone. The greatest mean net heat loss is in bora jets in the NE Adriatic, where it was −438 W m−2 and is weakest in the midwestern northern Adriatic, where it was near zero. Wind stress is concentrated over the NE half of Adriatic in four bora jets, while wind stress is weak in the NW Adriatic. There is significant variation in wind stress mean and standard deviation structure over the northern Adriatic with each bora event