9 research outputs found

    Informatics Enhanced SNP Microarray Analysis of 30 Miscarriage Samples Compared to Routine Cytogenetics

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    Purpose: The metaphase karyotype is often used as a diagnostic tool in the setting of early miscarriage; however this technique has several limitations. We evaluate a new technique for karyotyping that uses single nucleotide polymorphism microarrays (SNP). This technique was compared in a blinded, prospective fashion, to the traditional metaphase karyotype. Methods: Patients undergoing dilation and curettage for first trimester miscarriage between February and August 2010 were enrolled. Samples of chorionic villi were equally divided and sent for microarray testing in parallel with routine cytogenetic testing. Results: Thirty samples were analyzed, with only four discordant results. Discordant results occurred when the entire genome was duplicated or when a balanced rearrangement was present. Cytogenetic karyotyping took an average of 29 days while microarray-based karytoyping took an average of 12 days. Conclusions: Molecular karyotyping of POC after missed abortion using SNP microarray analysis allows for the ability to detect maternal cell contamination and provides rapid results with good concordance to standard cytogenetic analysis

    Demographic data.<sup>a</sup>

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    a<p>Results expressed as mean and range, with exceptions noted.</p>b<p>In 10 of the 30 cases, no fetal pole was present, with only a gestational sac visualized on ultrasound.</p

    Karyotype results of 30 cases analyzed by both SNP micro arrays and cytogenetics.

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    *<p>Autosomal Trisomies identified (2,3,13,14,15,16,18,20,22).</p>**<p>One unbalanced translocation detected by both methods 46,XX, der (14)t(3;14)(p21;q32)mat.</p><p>One unbalanced robertsonian translocation 46,XY,+15,der(15;15)(q10;q10) was reported as trisomy 15 by SNP micro array.</p
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