7 research outputs found
Bpal.BLAST_and_Coverage_filtered_noINDELS_2609.vcf
VCF file for Biorhiza pallida ingroup individuals created using samtools. Contaminant and high coverage sequences have been removed from this file. The VCF_haploif_parser.pl script was run on this file
Biorhiza pallida transcriptome built using Trinity
This transcriptome is assembled from larval B. pallida collected in Dorset, United Kingdom for another project. Headers are in the Trinity assembler forma
Belizinella_gibbera.meta-assembly.fa
Belizinella gibbera combined assembly assembled by clc bio v4.0.
Biorhiza_pallida.meta-assembly.fa
Biorhiza pallida combined assembly using clc bio v4.0.
tar archive of 2kb alignments
tar archive containing all 4 combinations of 2kb alignment
scripts_for_Hearn_et_al
Tar archive of custom scripts referred to in Hearn et al 2013. Includes a document summarising each scrip
DIYABC sequence datafile for Synergus umbraculus
Sequence data for seven loci for Synergus umbraculus populations from four putative refugial populations, in a format allowing analysis in DIYABC v1.0.4.46beta