Biological control of the vernal population increase of \u3cem\u3eCalanus finmarchicus\u3c/em\u3e on Georges Bank

An adjoint data assimilation approach was used to quantify the physical and biological controls on Calanus finmarchicus N3–C6 stages on Georges Bank and its nearby environs. The mean seasonal cycle of vertically averaged distributions, from 5 years of the GLOBEC Georges Bank Broad-Scale Surveys between January and June, was assimilated into a physical–biological model based on the climatological circulation. Large seasonal and spatial variability is present in the inferred supply sources, mortality rates, computed molting fluxes, and physical transports. Estimated mortalities fall within the range of observed rates, and exhibit stage structure that is consistent with earlier findings. Inferred off-bank initial conditions indicate that the deep basins in the Gulf of Maine are source regions of early stage nauplii and late-stage copepodids in January. However, the population increase on Georges Bank from January to April is controlled mostly by local biological processes. Magnitudes of the physical transport terms are nearly as large as the mortality and molting fluxes, but their bank-wide averages are small in comparison to the biological terms. The hypothesis of local biological control is tested in a sensitivity experiment in which upstream sources are set to zero. In that solution, the lack of upstream sources is compensated by a decrease in mortality that is much smaller than the uncertainty in observational estimates

An approach to improve direct runoff estimates and reduce uncertainty in the calculated groundwater component in water balances of large lakes

The final publication is available at Elsevier via © 2015. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/.Groundwater is important in the overall water budget of a lake because it affects the quantity and quality of surface water and the ecological health of the lake. The water balance equation is frequently used to estimate the net groundwater flow for small lakes but is seldom used to determine net groundwater flow components for large lakes because: (1) errors accumulate in the calculated groundwater term, and (2) there is an inability to accurately quantify the direct runoff component. In this water balance study of Lake Pyhäjärvi (155 km2) in Finland, it was hypothesized a hydrograph separation model could be used to estimate direct runoff to the lake and, when combined with a rigorous uncertainty analyses, would provide reliable net groundwater flow estimates. The PART hydrograph separation model was used to estimate annual per unit area direct runoff values for the watershed of the inflowing Yläneenjoki River (a subwatershed of the lake) which were then applied to other physically similar subwatersheds of the lake to estimate total direct runoff to the lake. The hydrograph separation method provided superior results and had lower uncertainty than the common approach of using a runoff coefficient based method. The average net groundwater flow into the lake was calculated to be +43 mm per year (+3.0% of average total inflow) for the 38 water years 1971–2008. It varied from −197 mm to 284 mm over that time, and had a magnitude greater than the uncertainty for 17 of the 38 years. The average indirect groundwater contribution to the lake (i.e., the groundwater part of the inflowing rivers) was 454 mm per year (+32% of average total inflow) and demonstrates the overall importance of groundwater. The techniques in this study are applicable to other large lakes and may allow small net groundwater flows to be reliably quantified in settings that might otherwise be unquantifiable or completely lost in large uncertainties.Maa- ja vesitekniikan tuki ry Foundation || Pyhäjärven suojelurahasto || Natural Sciences and Engineering Research Council of Canada (NSERC

The Thermal Design, Characterization, and Performance of the SPIDER Long-Duration Balloon Cryostat

We describe the SPIDER flight cryostat, which is designed to cool six millimeter-wavelength telescopes during an Antarctic long-duration balloon flight. The cryostat, one of the largest to have flown on a stratospheric payload, uses liquid helium-4 to deliver cooling power to stages at 4.2 and 1.6 K. Stainless steel capillaries facilitate a high flow impedance connection between the main liquid helium tank and a smaller superfluid tank, allowing the latter to operate at 1.6 K as long as there is liquid in the 4.2 K main tank. Each telescope houses a closed cycle helium-3 adsorption refrigerator that further cools the focal planes down to 300 mK. Liquid helium vapor from the main tank is routed through heat exchangers that cool radiation shields, providing negative thermal feedback. The system performed successfully during a 17 day flight in the 2014-2015 Antarctic summer. The cryostat had a total hold time of 16.8 days, with 15.9 days occurring during flight.Comment: 15 pgs, 17 fig

The good, the bad and the implicit: a comprehensive approach to annotating explicit and implicit sentiment

We present a fine-grained scheme for the annotation of polar sentiment in text, that accounts for explicit sentiment (so-called private states), as well as implicit expressions of sentiment (polar facts). Polar expressions are annotated below sentence level and classified according to their subjectivity status. Additionally, they are linked to one or more targets with a specific polar orientation and intensity. Other components of the annotation scheme include source attribution and the identification and classification of expressions that modify polarity. In previous research, little attention has been given to implicit sentiment, which represents a substantial amount of the polar expressions encountered in our data. An English and Dutch corpus of financial newswire, consisting of over 45,000 words each, was annotated using our scheme. A subset of this corpus was used to conduct an inter-annotator agreement study, which demonstrated that the proposed scheme can be used to reliably annotate explicit and implicit sentiment in real-world textual data, making the created corpora a useful resource for sentiment analysis

Destabilization of the thermohaline circulation by transient perturbations to the hydrological cycle

We reconsider the problem of the stability of the thermohaline circulation as described by a two-dimensional Boussinesq model with mixed boundary conditions. We determine how the stability properties of the system depend on the intensity of the hydrological cycle. We define a two-dimensional parameters' space descriptive of the hydrology of the system and determine, by considering suitable quasi-static perturbations, a bounded region where multiple equilibria of the system are realized. We then focus on how the response of the system to finite-amplitude surface freshwater forcings depends on their rate of increase. We show that it is possible to define a robust separation between slow and fast regimes of forcing. Such separation is obtained by singling out an estimate of the critical growth rate for the anomalous forcing, which can be related to the characteristic advective time scale of the system.Comment: 37 pages, 8 figures, submitted to Clim. Dy

SentiBench - a benchmark comparison of state-of-the-practice sentiment analysis methods

In the last few years thousands of scientific papers have investigated sentiment analysis, several startups that measure opinions on real data have emerged and a number of innovative products related to this theme have been developed. There are multiple methods for measuring sentiments, including lexical-based and supervised machine learning methods. Despite the vast interest on the theme and wide popularity of some methods, it is unclear which one is better for identifying the polarity (i.e., positive or negative) of a message. Accordingly, there is a strong need to conduct a thorough apple-to-apple comparison of sentiment analysis methods, \textit{as they are used in practice}, across multiple datasets originated from different data sources. Such a comparison is key for understanding the potential limitations, advantages, and disadvantages of popular methods. This article aims at filling this gap by presenting a benchmark comparison of twenty-four popular sentiment analysis methods (which we call the state-of-the-practice methods). Our evaluation is based on a benchmark of eighteen labeled datasets, covering messages posted on social networks, movie and product reviews, as well as opinions and comments in news articles. Our results highlight the extent to which the prediction performance of these methods varies considerably across datasets. Aiming at boosting the development of this research area, we open the methods' codes and datasets used in this article, deploying them in a benchmark system, which provides an open API for accessing and comparing sentence-level sentiment analysis methods

On Being Negative

This paper investigates the pragmatic expressions of negative evaluation (negativity) in two corpora: (i) comments posted online in response to newspaper opinion articles; and (ii) online reviews of movies, books and consumer products. We propose a taxonomy of linguistic resources that are deployed in the expression of negativity, with two broad groups at the top level of the taxonomy: resources from the lexicogrammar or from discourse semantics. We propose that rhetorical figures can be considered part of the discourse semantic resources used in the expression of negativity. Using our taxonomy as starting point, we carry out a corpus analysis, and focus on three phenomena: adverb + adjective combinations; rhetorical questions; and rhetorical figures. Although the analysis in this paper is corpus-assisted rather than corpus-driven, the final goal of our research is to make it quantitative, in extracting patterns and resources that can be detected automatically

Resection of thoracic malignancies infiltrating cardiac structures with use of cardiopulmonary bypass

Background: Only few reports exist on malignant thoracic neoplasms that require cardiopulmonary bypass during resection. We aimed to investigate the early and late clinical outcome of these patients. Methods: Patients with thoracic malignancies that underwent surgery between 2002 and 2014 were analyzed. All patients had cardiopulomonary bypass support during resection. Clinical and perioperative data was retrospectively reviewed for outcome and overall survival. Results: Fifteen patients (12 female, mean age of 55 ± 15 years, range 24 to 80 years) were identified. Eleven (8 female) were diagnosed with primary thoracic malignomas and four with metastases. Three patients died early postoperatively. Patients diagnosed with sarcoma had a significantly worse outcome than non-sarcoma patients (83.3 ± 15.2 % after 1 year, 31.3 ± 24.5 % after 5 years vs. 83.3 ± 15.2 % after 1 year, 0 ± 0 % after 5 years, p = 0.005). Conclusions: Malignancies with extension into cardiac structures or infiltration of great vessels can be resected with cardiopulmonary bypass support and tolerable risk. Carefully selected patients can undergo advanced operative procedures with an acceptable 1-year-survival, but only few patients achieved good long-term outcome