1,663 research outputs found
Out-Crossing Among Commercial Strains Of The Northern Quahog, Mercenaria Mercenaria: Survival, Growth And Implications For Selective Breeding
Because the accumulation of inbreeding within hatchery-propagated stocks of the hard clam, Mercenaria mercenaria (Linnaeus, 1758), could result in reduced growth and survival, we studied the potential for improving performance through out-crossing among existing hatchery strains. We produced all 10 possible out-crossed combinations among 5 strains of clams as well as all 5 pure parental strains simultaneously in the hatchery and measured their size at the time of metamorphosis (the spat stage) and at the end of a nursery period in mesh bags at a single field site (the seed stage). We then planted replicate plots of all fifteen strains at five field sites in Virginia, USA encompassing the range of salinity conditions used by commercial growers, and monitored growth and survival for two growing seasons. We found significant phenotypic differences among strains at the spat and seed stage, but different strains performed best at each stage. In the field we found significant site effects, strain effects and strain-by-site interactions, but there was no evidence of negative correlations in performance among sites indicating strong trade-offs that would be problematic for selective breeding. Three different linear contrasts designed to compare out-crossed and pure strains for each parental stock, test for nonadditive genetic effects within each pairing of different parental strains, and estimate the general combining ability of parental strains reveal a complex pattern. We found both inbreeding and out-breeding depression depending on the developmental stage of the clams and the parental strain examined. Within strain crosses generally produced larger spat but smaller seed. Out-crossed progeny were generally smaller at the spat stage than the average of their parental lines but larger at the seed stage. The two best performing parental strains had significant, positive, general combining abilities, whereas this measure was negative for the two worst parental strains. In the field, inbreeding depression was restricted to lines that showed poor pure strain performance, and these strains also showed poor general combining ability, whereas strains with good pure line performance showed out-breeding depression and good general combining ability. Only the poorest performing pure parental lines showed non-additive effects when we compared each out-crossed strain to the mean of its parental strains, suggesting that heterotic effects are unlikely to be useful for selective breeding. Finally, there were significant correlations between seed measurements and field performance indicating that it may be possible, in the context of selective breeding programs, to weed out inferior strains or families early in the life cycle
Session One: Limits on Misleading Conduct
A Transcript Featuring the Honorable Thomas Zlaket, Wm. Reece Smith, Jr., Esq., Professor Nathan Crystal, and Professor Amy Mashburn, Moderator from the symposium - Ethical Issues in Settlement Negotiations, Session One: Limits on Misleading Conduct
Microsatellite marker development and analysis in the eastern oyster (Crassostrea virginica): Confirmation of null alleles and non-Mendelian segregation ratios
Eighteen microsatellite markers were developed for the Crassostrea virginica nuclear genome, including di-, tri-, and tetranucleotide microsatellite repeat regions that included perfect, imperfect, and compound repeat sequences. A reference panel with DNA from the parents and four progeny of 10 full-sib families was used for a preliminary confirmation of polymorphism at these loci and indications of null alleles. Null alleles were discovered at three loci; in two instances, primer redesign enabled their amplification. Two to five representative alleles from each locus were sequenced to ensure that the targeted loci were amplifying. The sequence analysis revealed not only variation in the number of simple sequence repeat units, but also polymorphisms in the microsatellite flanking regions. A total of 3626 bp of combined microsatellite flanking region from the 18 loci was examined, revealing indels as well as nucleotide site substitutions. Overall, 16 indels and 146 substitutions were found with an average of 4.5% polymorphism across all loci. Eight markers were tested on the parents and 39-61 progeny from each of four families for examination of allelic inheritance patterns and genotypic ratios. Twenty-six tests of segregation ratios revealed eight significant departures from expected Mendelian ratios, three of which remained significant after correction for multiple tests. Deviations were observed in both the directions of heterozygote excess and deficiency
Systemic Risk and Vulnerability Analysis of Multi-cloud Environments
With the increasing use of multi-cloud environments, security professionals
face challenges in configuration, management, and integration due to uneven
security capabilities and features among providers. As a result, a fragmented
approach toward security has been observed, leading to new attack vectors and
potential vulnerabilities. Other research has focused on single-cloud platforms
or specific applications of multi-cloud environments. Therefore, there is a
need for a holistic security and vulnerability assessment and defense strategy
that applies to multi-cloud platforms. We perform a risk and vulnerability
analysis to identify attack vectors from software, hardware, and the network,
as well as interoperability security issues in multi-cloud environments.
Applying the STRIDE and DREAD threat modeling methods, we present an analysis
of the ecosystem across six attack vectors: cloud architecture, APIs,
authentication, automation, management differences, and cybersecurity
legislation. We quantitatively determine and rank the threats in multi-cloud
environments and suggest mitigation strategies.Comment: 27 pages, 9 figure
Demonstrating Occupational Transitions on the Lower Savannah River Drainage through Private Collections in South Carolina
Tracking Triploid Mortalities Of Eastern Oysters Crassostrea virginica In The Virginia Portion Of The Chesapeake Bay
Since 2012, aquacultured eastern oysters Crassostrea virginica have been reported by oyster farmers to display mortality approaching 30%, and in some cases 85%, in areas of the lower Chesapeake Bay, VA. Based on accounts from industry, this mortality has typically affected 1-y-old oysters between May and early July, and has tended to occur in triploid oysters, which represent the vast bulk of production in the area. During this period, samples submitted for pathology have not revealed the presence of major pathogens as a cause. In 2015, to gain deeper insight into this mortality and determine whether specific sites, ploidy condition, or genetic lines were affected, oyster seed commercially produced in early 2014 were obtained from four lines, one diploid (2N DEBY) and three triploid (3N DEBY, 3N hANA, and 3N Northern). These lines were deployed in July 2014 at aquaculture farms at five Chesapeake Bay locations: Locklies Creek and Milford Haven on the western shore, and Pungoteague Creek, Nassawadox Creek, and Cherrystone Creek on the Eastern Shore. During this study, mortality was observed to peak in June at most sites, reaching a mean mortality across all tested lines of 17.0% and a cumulative mortality for the study period of 32.0% at Nassawadox Creek, the site most severely affected by mortality that followed the expected early summer mortality pattern. Interval mortality at all sites decreased to under 5% after June, but cumulative levels for the study period reached from 8.8% to 18.6% even at the sites least affected by mortality. This represents a high level of mortality given the documented absence of material involvement by major oyster pathogens such as Hapolosporidium nelsoni and Perkinsus marinus. Infiltration of gill tissues by hemocytes, observed in up to 33% of individuals at Nassawadox Creek coincident with the increase in mortality, was the only pathology observed. Harmful algal blooms were not associated with the mortality, nor were abnormal temperatures or salinities. There was no clear relationship of mortality to oyster genetic heritage, although there was variability in susceptibility among oyster lines and interactions between lines and specific sites. At some locations and in comparison with diploids, triploid oysters appeared to be more susceptible to mortality. Mortality in triploids was coincident with the timing of peak gametogenic development in diploids. Given the lack of involvement by major pathogens and the possible association of mortality with oyster gametogenesis, future work should seek to better understand the suite of environmental stressors potentially impacting cultured oysters in these systems and their interactions with the physiology and energetics of these animals
- …